RNA–Protein interactions for RNA: ENST00000467985.1

COL7A1-207, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-207ENST00000467985 DESI1Q6ICB0 168 aa17.4■□□□□ 0.38
COL7A1-207ENST00000467985 TRABD2AQ86V40 505 aa17.4■□□□□ 0.38
COL7A1-207ENST00000467985 SLC44A2Q8IWA5 706 aaPredicted RBP17.4■□□□□ 0.38
COL7A1-207ENST00000467985 BANPQ8N9N5 519 aa17.4■□□□□ 0.38
COL7A1-207ENST00000467985 GATA5Q9BWX5 397 aaPredicted RBP17.4■□□□□ 0.38
COL7A1-207ENST00000467985 UGT2B28Q9BY64 529 aa17.4■□□□□ 0.38
COL7A1-207ENST00000467985 EML4Q9HC35 981 aaKnown RBP17.4■□□□□ 0.38
COL7A1-207ENST00000467985 KCNN3Q9UGI6 736 aa17.4■□□□□ 0.38
COL7A1-207ENST00000467985 C19orf53Q9UNZ5 99 aaPredicted RBP17.4■□□□□ 0.38
COL7A1-207ENST00000467985 CAMK2AQ9UQM7 478 aa17.4■□□□□ 0.38
COL7A1-207ENST00000467985 SLC6A5Q9Y345 797 aa17.4■□□□□ 0.38
COL7A1-207ENST00000467985 AKAP9Q99996 3911 aa17.4■□□□□ 0.38
COL7A1-207ENST00000467985 DVL2O14641 736 aa17.39■□□□□ 0.37
COL7A1-207ENST00000467985 TIMP3P35625 211 aa17.39■□□□□ 0.37
COL7A1-207ENST00000467985 MC3RP41968 323 aa17.39■□□□□ 0.37
COL7A1-207ENST00000467985 KIAA0040Q15053 153 aa17.39■□□□□ 0.37
COL7A1-207ENST00000467985 ZNHIT3Q15649 155 aaPredicted RBP17.39■□□□□ 0.37
COL7A1-207ENST00000467985 CYP27C1Q4G0S4 372 aa17.39■□□□□ 0.37
COL7A1-207ENST00000467985 NSUN5P2Q63ZY6 315 aa17.39■□□□□ 0.37
COL7A1-207ENST00000467985 NPSR1Q6W5P4 371 aa17.39■□□□□ 0.37
COL7A1-207ENST00000467985 PLCZ1Q86YW0 608 aa17.39■□□□□ 0.37
COL7A1-207ENST00000467985 OR2L13Q8N349 312 aa17.39■□□□□ 0.37
COL7A1-207ENST00000467985 WDSUB1Q8N9V3 476 aa17.39■□□□□ 0.37
COL7A1-207ENST00000467985 LRRC46Q96FV0 321 aa17.39■□□□□ 0.37
COL7A1-207ENST00000467985 PGM2Q96G03 612 aa17.39■□□□□ 0.37
COL7A1-207ENST00000467985 ZNF764Q96H86 408 aaPredicted RBP17.39■□□□□ 0.37
COL7A1-207ENST00000467985 PKNOX2Q96KN3 472 aa17.39■□□□□ 0.37
COL7A1-207ENST00000467985 AMDHD1Q96NU7 426 aa17.39■□□□□ 0.37
COL7A1-207ENST00000467985 CCT7Q99832 543 aa17.39■□□□□ 0.37
COL7A1-207ENST00000467985 OR2B2Q9GZK3 357 aa17.39■□□□□ 0.37
COL7A1-207ENST00000467985 SERHLQ9NQF3 203 aa17.39■□□□□ 0.37
COL7A1-207ENST00000467985 DDX18Q9NVP1 670 aaKnown RBP17.39■□□□□ 0.37
COL7A1-207ENST00000467985 MAPRE3Q9UPY8 281 aa17.39■□□□□ 0.37
COL7A1-207ENST00000467985 TMED5Q9Y3A6 229 aa17.39■□□□□ 0.37
COL7A1-207ENST00000467985 WIF1Q9Y5W5 379 aa17.39■□□□□ 0.37
COL7A1-207ENST00000467985 C2orf72A6NCS6 295 aa17.38■□□□□ 0.37
COL7A1-207ENST00000467985 TTC36A6NLP5 189 aa17.38■□□□□ 0.37
COL7A1-207ENST00000467985 NPHS1O60500 1241 aa17.38■□□□□ 0.37
COL7A1-207ENST00000467985 IL2RAP01589 272 aa17.38■□□□□ 0.37
COL7A1-207ENST00000467985 FGF4P08620 206 aa17.38■□□□□ 0.37
COL7A1-207ENST00000467985 CEACAM8P31997 349 aaPredicted RBP17.38■□□□□ 0.37
COL7A1-207ENST00000467985 PEX19P40855 299 aa17.38■□□□□ 0.37
COL7A1-207ENST00000467985 RCAN2Q14206 197 aa17.38■□□□□ 0.37
COL7A1-207ENST00000467985 KANK2Q63ZY3 851 aa17.38■□□□□ 0.37
COL7A1-207ENST00000467985 TMEM107Q6UX40 140 aa17.38■□□□□ 0.37
COL7A1-207ENST00000467985 SEM1Q6ZVN7 128 aa17.38■□□□□ 0.37
COL7A1-207ENST00000467985 WDR53Q7Z5U6 358 aaPredicted RBP17.38■□□□□ 0.37
COL7A1-207ENST00000467985 YRDCQ86U90 279 aaKnown RBP17.38■□□□□ 0.37
COL7A1-207ENST00000467985 LIX1LQ8IVB5 337 aa17.38■□□□□ 0.37
COL7A1-207ENST00000467985 OR14L1PQ8NHC6 308 aa17.38■□□□□ 0.37
COL7A1-207ENST00000467985 RNF138Q8WVD3 245 aa17.38■□□□□ 0.37
COL7A1-207ENST00000467985 WDYHV1Q96HA8 205 aa17.38■□□□□ 0.37
COL7A1-207ENST00000467985 GLIPR2Q9H4G4 154 aa17.38■□□□□ 0.37
COL7A1-207ENST00000467985 CALHM2Q9HA72 323 aa17.38■□□□□ 0.37
COL7A1-207ENST00000467985 TMBIM4Q9HC24 238 aa17.38■□□□□ 0.37
COL7A1-207ENST00000467985 ZNF629Q9UEG4 869 aaPredicted RBP17.38■□□□□ 0.37
COL7A1-207ENST00000467985 MRTO4Q9UKD2 239 aaKnown RBP17.38■□□□□ 0.37
COL7A1-207ENST00000467985 MRPS18CQ9Y3D5 142 aaKnown RBP17.38■□□□□ 0.37
COL7A1-207ENST00000467985 MAP1AP78559 2803 aaPredicted RBP17.38■□□□□ 0.37
COL7A1-207ENST00000467985 CD8B2A6NJW9 211 aa17.37■□□□□ 0.37
COL7A1-207ENST00000467985 UPK1AO00322 258 aa17.37■□□□□ 0.37
COL7A1-207ENST00000467985 SASH3O75995 380 aa17.37■□□□□ 0.37
COL7A1-207ENST00000467985 PSMG1O95456 288 aa17.37■□□□□ 0.37
COL7A1-207ENST00000467985 CPN1P15169 458 aa17.37■□□□□ 0.37
COL7A1-207ENST00000467985 ALDH3A1P30838 453 aa17.37■□□□□ 0.37
COL7A1-207ENST00000467985 SRD5A2P31213 254 aa17.37■□□□□ 0.37
COL7A1-207ENST00000467985 PSG6Q00889 435 aa17.37■□□□□ 0.37
COL7A1-207ENST00000467985 PRSS53Q2L4Q9 553 aa17.37■□□□□ 0.37
COL7A1-207ENST00000467985 CES4AQ5XG92 561 aa17.37■□□□□ 0.37
COL7A1-207ENST00000467985 ENPP6Q6UWR7 440 aa17.37■□□□□ 0.37
COL7A1-207ENST00000467985 ZPLD1Q8TCW7 415 aa17.37■□□□□ 0.37
COL7A1-207ENST00000467985 ELP4Q96EB1 424 aa17.37■□□□□ 0.37
COL7A1-207ENST00000467985 FCRL1Q96LA6 429 aa17.37■□□□□ 0.37
COL7A1-207ENST00000467985 FAM111AQ96PZ2 611 aa17.37■□□□□ 0.37
COL7A1-207ENST00000467985 ZNF559Q9BR84 538 aa17.37■□□□□ 0.37
COL7A1-207ENST00000467985 Q9N2J8 555 aa17.37■□□□□ 0.37
COL7A1-207ENST00000467985 ZNF446Q9NWS9 450 aa17.37■□□□□ 0.37
COL7A1-207ENST00000467985 TAS2R10Q9NYW0 307 aa17.37■□□□□ 0.37
COL7A1-207ENST00000467985 DNAJC15Q9Y5T4 150 aa17.37■□□□□ 0.37
COL7A1-207ENST00000467985 TEP1Q99973 2627 aaKnown RBP17.36■□□□□ 0.37
COL7A1-207ENST00000467985 PDPK1O15530 556 aa17.36■□□□□ 0.37
COL7A1-207ENST00000467985 TBX19O60806 448 aa17.36■□□□□ 0.37
COL7A1-207ENST00000467985 NME6O75414 186 aaPredicted RBP17.36■□□□□ 0.37
COL7A1-207ENST00000467985 CYP4B1P13584 511 aa17.36■□□□□ 0.37
COL7A1-207ENST00000467985 DDX5P17844 614 aaKnown RBP17.36■□□□□ 0.37
COL7A1-207ENST00000467985 TACR1P25103 407 aa17.36■□□□□ 0.37
COL7A1-207ENST00000467985 SERPINB5P36952 375 aa17.36■□□□□ 0.37
COL7A1-207ENST00000467985 PSMD4P55036 377 aaKnown RBP17.36■□□□□ 0.37
COL7A1-207ENST00000467985 DECR1Q16698 335 aa17.36■□□□□ 0.37
COL7A1-207ENST00000467985 HSP90B2PQ58FF3 399 aa17.36■□□□□ 0.37
COL7A1-207ENST00000467985 AAGABQ6PD74 315 aa17.36■□□□□ 0.37
COL7A1-207ENST00000467985 Q6ZSR9 355 aa17.36■□□□□ 0.37
COL7A1-207ENST00000467985 IFNEQ86WN2 208 aa17.36■□□□□ 0.37
COL7A1-207ENST00000467985 TNIP2Q8NFZ5 429 aa17.36■□□□□ 0.37
COL7A1-207ENST00000467985 ZFP28Q8NHY6 868 aa17.36■□□□□ 0.37
COL7A1-207ENST00000467985 EFHD2Q96C19 240 aaPredicted RBP17.36■□□□□ 0.37
COL7A1-207ENST00000467985 EGLN2Q96KS0 407 aa17.36■□□□□ 0.37
COL7A1-207ENST00000467985 TRIB1Q96RU8 372 aa17.36■□□□□ 0.37
COL7A1-207ENST00000467985 C3orf14Q9HBI5 128 aa17.36■□□□□ 0.37
COL7A1-207ENST00000467985 SDHAF3Q9NRP4 125 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms