RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 SARNPP82979 210 aaKnown RBP4.97□□□□□ -1.61
PTCD3-207ENST00000467273 MAT1AQ00266 395 aaKnown RBP4.97□□□□□ -1.61
PTCD3-207ENST00000467273 RELQ04864 619 aaPredicted RBP4.97□□□□□ -1.61
PTCD3-207ENST00000467273 PRDX1Q06830 199 aaKnown RBP4.97□□□□□ -1.61
PTCD3-207ENST00000467273 HSPA14Q0VDF9 509 aa4.97□□□□□ -1.61
PTCD3-207ENST00000467273 FOXO1Q12778 655 aa4.97□□□□□ -1.61
PTCD3-207ENST00000467273 TBL3Q12788 808 aaKnown RBP4.97□□□□□ -1.61
PTCD3-207ENST00000467273 TFDP2Q14188 446 aa4.97□□□□□ -1.61
PTCD3-207ENST00000467273 SLC10A1Q14973 349 aa4.97□□□□□ -1.61
PTCD3-207ENST00000467273 TMED2Q15363 201 aa4.97□□□□□ -1.61
PTCD3-207ENST00000467273 KRTAP24-1Q3LI83 254 aa4.97□□□□□ -1.61
PTCD3-207ENST00000467273 ZNF425Q6IV72 752 aa4.97□□□□□ -1.61
PTCD3-207ENST00000467273 TMEM108Q6UXF1 575 aa4.97□□□□□ -1.61
PTCD3-207ENST00000467273 TAS2R42Q7RTR8 314 aa4.97□□□□□ -1.61
PTCD3-207ENST00000467273 PID1Q7Z2X4 250 aa4.97□□□□□ -1.61
PTCD3-207ENST00000467273 VRK3Q8IV63 474 aa4.97□□□□□ -1.61
PTCD3-207ENST00000467273 PIANPQ8IYJ0 282 aa4.97□□□□□ -1.61
PTCD3-207ENST00000467273 ZNF567Q8N184 647 aa4.97□□□□□ -1.61
PTCD3-207ENST00000467273 C2orf73Q8N5S3 287 aaPredicted RBP4.97□□□□□ -1.61
PTCD3-207ENST00000467273 TNIP2Q8NFZ5 429 aa4.97□□□□□ -1.61
PTCD3-207ENST00000467273 OR9A4Q8NGU2 314 aa4.97□□□□□ -1.61
PTCD3-207ENST00000467273 NTN5Q8WTR8 489 aaPredicted RBP4.97□□□□□ -1.61
PTCD3-207ENST00000467273 STYXQ8WUJ0 223 aa4.97□□□□□ -1.61
PTCD3-207ENST00000467273 SMPDL3AQ92484 453 aa4.97□□□□□ -1.61
PTCD3-207ENST00000467273 RAPGEF5Q92565 580 aa4.97□□□□□ -1.61
PTCD3-207ENST00000467273 SLCO2A1Q92959 643 aa4.97□□□□□ -1.61
PTCD3-207ENST00000467273 PTP4A1Q93096 173 aa4.97□□□□□ -1.61
PTCD3-207ENST00000467273 PERPQ96FX8 193 aa4.97□□□□□ -1.61
PTCD3-207ENST00000467273 FOPNLQ96NB1 174 aa4.97□□□□□ -1.61
PTCD3-207ENST00000467273 IL17FQ96PD4 163 aa4.97□□□□□ -1.61
PTCD3-207ENST00000467273 FAM173AQ9BQD7 235 aa4.97□□□□□ -1.61
PTCD3-207ENST00000467273 FERMT1Q9BQL6 677 aa4.97□□□□□ -1.61
PTCD3-207ENST00000467273 CARD6Q9BX69 1037 aa4.97□□□□□ -1.61
PTCD3-207ENST00000467273 TRIM5Q9C035 493 aa4.97□□□□□ -1.61
PTCD3-207ENST00000467273 GBA3Q9H227 469 aa4.97□□□□□ -1.61
PTCD3-207ENST00000467273 FAM96AQ9H5X1 160 aa4.97□□□□□ -1.61
PTCD3-207ENST00000467273 CLK4Q9HAZ1 481 aaKnown RBP4.97□□□□□ -1.61
PTCD3-207ENST00000467273 IL1RL2Q9HB29 575 aa4.97□□□□□ -1.61
PTCD3-207ENST00000467273 MRPS30Q9NP92 439 aaKnown RBP4.97□□□□□ -1.61
PTCD3-207ENST00000467273 ZNF701Q9NV72 531 aaPredicted RBP4.97□□□□□ -1.61
PTCD3-207ENST00000467273 TMEM160Q9NX00 188 aa4.97□□□□□ -1.61
PTCD3-207ENST00000467273 STOX2Q9P2F5 926 aaPredicted RBP4.97□□□□□ -1.61
PTCD3-207ENST00000467273 UVRAGQ9P2Y5 699 aa4.97□□□□□ -1.61
PTCD3-207ENST00000467273 RSPH14Q9UHP6 348 aa4.97□□□□□ -1.61
PTCD3-207ENST00000467273 PTBP2Q9UKA9 531 aaKnown RBP4.97□□□□□ -1.61
PTCD3-207ENST00000467273 CAPN11Q9UMQ6 739 aa4.97□□□□□ -1.61
PTCD3-207ENST00000467273 YARS2Q9Y2Z4 477 aaKnown RBP4.97□□□□□ -1.61
PTCD3-207ENST00000467273 DTNAQ9Y4J8 743 aa4.97□□□□□ -1.61
PTCD3-207ENST00000467273 NFS1Q9Y697 457 aa4.97□□□□□ -1.61
PTCD3-207ENST00000467273 TRGV5A0A0B4J1U4 118 aa4.96□□□□□ -1.62
PTCD3-207ENST00000467273 IGKV1-8A0A0C4DH67 115 aa4.96□□□□□ -1.62
PTCD3-207ENST00000467273 hCG_1807616A0A1W2PRN6 198 aa4.96□□□□□ -1.62
PTCD3-207ENST00000467273 C3orf70A6NLC5 250 aaPredicted RBP4.96□□□□□ -1.62
PTCD3-207ENST00000467273 LRRC53A6NM62 1247 aa4.96□□□□□ -1.62
PTCD3-207ENST00000467273 K7EPI3 171 aa4.96□□□□□ -1.62
PTCD3-207ENST00000467273 CD5LO43866 347 aa4.96□□□□□ -1.62
PTCD3-207ENST00000467273 FAM20BO75063 409 aa4.96□□□□□ -1.62
PTCD3-207ENST00000467273 ERN1O75460 977 aaKnown RBP4.96□□□□□ -1.62
PTCD3-207ENST00000467273 ZNF189O75820 626 aaPredicted RBP4.96□□□□□ -1.62
PTCD3-207ENST00000467273 ZFPL1O95159 310 aa4.96□□□□□ -1.62
PTCD3-207ENST00000467273 SLU7O95391 586 aaKnown RBP4.96□□□□□ -1.62
PTCD3-207ENST00000467273 TNFRSF6BO95407 300 aa4.96□□□□□ -1.62
PTCD3-207ENST00000467273 C1orf105O95561 183 aa4.96□□□□□ -1.62
PTCD3-207ENST00000467273 STATHP02808 62 aa4.96□□□□□ -1.62
PTCD3-207ENST00000467273 QDPRP09417 244 aa4.96□□□□□ -1.62
PTCD3-207ENST00000467273 NR2F1P10589 423 aa4.96□□□□□ -1.62
PTCD3-207ENST00000467273 CNR1P21554 472 aa4.96□□□□□ -1.62
PTCD3-207ENST00000467273 CCR7P32248 378 aa4.96□□□□□ -1.62
PTCD3-207ENST00000467273 GJC1P36383 396 aa4.96□□□□□ -1.62
PTCD3-207ENST00000467273 PTH2RP49190 550 aa4.96□□□□□ -1.62
PTCD3-207ENST00000467273 SSR4P51571 173 aa4.96□□□□□ -1.62
PTCD3-207ENST00000467273 LOXL3P58215 753 aa4.96□□□□□ -1.62
PTCD3-207ENST00000467273 TAS2R40P59535 323 aa4.96□□□□□ -1.62
PTCD3-207ENST00000467273 RPS15AP62244 130 aaKnown RBP4.96□□□□□ -1.62
PTCD3-207ENST00000467273 EEF1A1P68104 462 aaKnown RBP4.96□□□□□ -1.62
PTCD3-207ENST00000467273 C17orf67Q0P5P2 114 aa4.96□□□□□ -1.62
PTCD3-207ENST00000467273 PRPSAP1Q14558 356 aa4.96□□□□□ -1.62
PTCD3-207ENST00000467273 SIX1Q15475 284 aaPredicted RBP4.96□□□□□ -1.62
PTCD3-207ENST00000467273 KRT71Q3SY84 523 aa4.96□□□□□ -1.62
PTCD3-207ENST00000467273 KBTBD12Q3ZCT8 623 aa4.96□□□□□ -1.62
PTCD3-207ENST00000467273 LRRC38Q5VT99 294 aa4.96□□□□□ -1.62
PTCD3-207ENST00000467273 EEF1A1P5Q5VTE0 462 aa4.96□□□□□ -1.62
PTCD3-207ENST00000467273 QSOX2Q6ZRP7 698 aa4.96□□□□□ -1.62
PTCD3-207ENST00000467273 CCDC80Q76M96 950 aa4.96□□□□□ -1.62
PTCD3-207ENST00000467273 OTOAQ7RTW8 1153 aa4.96□□□□□ -1.62
PTCD3-207ENST00000467273 MDGA2Q7Z553 956 aa4.96□□□□□ -1.62
PTCD3-207ENST00000467273 PM20D2Q8IYS1 436 aa4.96□□□□□ -1.62
PTCD3-207ENST00000467273 LIX1Q8N485 282 aa4.96□□□□□ -1.62
PTCD3-207ENST00000467273 KIF2BQ8N4N8 673 aa4.96□□□□□ -1.62
PTCD3-207ENST00000467273 TMEM251Q8N6I4 163 aa4.96□□□□□ -1.62
PTCD3-207ENST00000467273 NFAM1Q8NET5 270 aaPredicted RBP4.96□□□□□ -1.62
PTCD3-207ENST00000467273 CEP70Q8NHQ1 597 aa4.96□□□□□ -1.62
PTCD3-207ENST00000467273 ROBO4Q8WZ75 1007 aa4.96□□□□□ -1.62
PTCD3-207ENST00000467273 KRT35Q92764 455 aa4.96□□□□□ -1.62
PTCD3-207ENST00000467273 CDKN2AIPNLQ96HQ2 116 aa4.96□□□□□ -1.62
PTCD3-207ENST00000467273 DNAJC1Q96KC8 554 aaKnown RBP4.96□□□□□ -1.62
PTCD3-207ENST00000467273 ZFP3Q96NJ6 502 aa4.96□□□□□ -1.62
PTCD3-207ENST00000467273 ALS2CR12Q96Q35 445 aa4.96□□□□□ -1.62
PTCD3-207ENST00000467273 DCLRE1CQ96SD1 692 aaKnown RBP4.96□□□□□ -1.62
PTCD3-207ENST00000467273 C19orf24Q9BVV8 132 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms