RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 CT62P0C5K7 136 aa16.1■□□□□ 0.17
CPSF4-209ENST00000465132 S1PR1P21453 382 aa16.1■□□□□ 0.17
CPSF4-209ENST00000465132 DRD5P21918 477 aa16.1■□□□□ 0.17
CPSF4-209ENST00000465132 KRT20P35900 424 aa16.1■□□□□ 0.17
CPSF4-209ENST00000465132 PPICP45877 212 aa16.1■□□□□ 0.17
CPSF4-209ENST00000465132 ZFP36L2P47974 494 aaKnown RBP16.1■□□□□ 0.17
CPSF4-209ENST00000465132 CDK9P50750 372 aaKnown RBP16.1■□□□□ 0.17
CPSF4-209ENST00000465132 PRKAG1P54619 331 aa16.1■□□□□ 0.17
CPSF4-209ENST00000465132 PHC1P78364 1004 aa16.1■□□□□ 0.17
CPSF4-209ENST00000465132 MRPS22P82650 360 aaKnown RBP16.1■□□□□ 0.17
CPSF4-209ENST00000465132 ZNF155Q12901 538 aaPredicted RBP16.1■□□□□ 0.17
CPSF4-209ENST00000465132 EXOSC7Q15024 291 aaKnown RBP16.1■□□□□ 0.17
CPSF4-209ENST00000465132 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.1■□□□□ 0.17
CPSF4-209ENST00000465132 GK5Q6ZS86 529 aa16.1■□□□□ 0.17
CPSF4-209ENST00000465132 SNX32Q86XE0 403 aa16.1■□□□□ 0.17
CPSF4-209ENST00000465132 GPALPP1Q8IXQ4 340 aa16.1■□□□□ 0.17
CPSF4-209ENST00000465132 CLECL1Q8IZS7 167 aa16.1■□□□□ 0.17
CPSF4-209ENST00000465132 ARMC10Q8N2F6 343 aa16.1■□□□□ 0.17
CPSF4-209ENST00000465132 HORMAD2Q8N7B1 307 aa16.1■□□□□ 0.17
CPSF4-209ENST00000465132 C16orf52Q8NHV5 167 aa16.1■□□□□ 0.17
CPSF4-209ENST00000465132 ROPN1LQ96C74 230 aa16.1■□□□□ 0.17
CPSF4-209ENST00000465132 GAL3ST4Q96RP7 486 aa16.1■□□□□ 0.17
CPSF4-209ENST00000465132 SLC35A5Q9BS91 424 aa16.1■□□□□ 0.17
CPSF4-209ENST00000465132 WWTR1Q9GZV5 400 aa16.1■□□□□ 0.17
CPSF4-209ENST00000465132 CXorf36Q9H7Y0 433 aa16.1■□□□□ 0.17
CPSF4-209ENST00000465132 Q9N2J8 555 aa16.1■□□□□ 0.17
CPSF4-209ENST00000465132 MYOTQ9UBF9 498 aa16.1■□□□□ 0.17
CPSF4-209ENST00000465132 AP3M1Q9Y2T2 418 aa16.1■□□□□ 0.17
CPSF4-209ENST00000465132 C15orf38-AP3S2A0A0A6YYH1 394 aa16.09■□□□□ 0.17
CPSF4-209ENST00000465132 LOC100653049A0A140TA62 436 aa16.09■□□□□ 0.17
CPSF4-209ENST00000465132 TMEM247A6NEH6 219 aa16.09■□□□□ 0.17
CPSF4-209ENST00000465132 CCL21O00585 134 aa16.09■□□□□ 0.17
CPSF4-209ENST00000465132 KRT34O76011 436 aa16.09■□□□□ 0.17
CPSF4-209ENST00000465132 ALOX5P09917 674 aa16.09■□□□□ 0.17
CPSF4-209ENST00000465132 COX4I1P13073 169 aa16.09■□□□□ 0.17
CPSF4-209ENST00000465132 CAPN3P20807 821 aa16.09■□□□□ 0.17
CPSF4-209ENST00000465132 EFNA1P20827 205 aaPredicted RBP16.09■□□□□ 0.17
CPSF4-209ENST00000465132 CA7P43166 264 aa16.09■□□□□ 0.17
CPSF4-209ENST00000465132 EMDP50402 254 aa16.09■□□□□ 0.17
CPSF4-209ENST00000465132 RPP38P78345 283 aaKnown RBP16.09■□□□□ 0.17
CPSF4-209ENST00000465132 NFYCQ13952 458 aa16.09■□□□□ 0.17
CPSF4-209ENST00000465132 KRT72Q14CN4 511 aa16.09■□□□□ 0.17
CPSF4-209ENST00000465132 EBPQ15125 230 aaKnown RBP16.09■□□□□ 0.17
CPSF4-209ENST00000465132 LRIF1Q5T3J3 769 aa16.09■□□□□ 0.17
CPSF4-209ENST00000465132 MTFR2Q6P444 385 aa16.09■□□□□ 0.17
CPSF4-209ENST00000465132 OPN5Q6U736 354 aa16.09■□□□□ 0.17
CPSF4-209ENST00000465132 ANGPTL8Q6UXH0 198 aa16.09■□□□□ 0.17
CPSF4-209ENST00000465132 C6orf120Q7Z4R8 191 aa16.09■□□□□ 0.17
CPSF4-209ENST00000465132 ARPINQ7Z6K5 226 aa16.09■□□□□ 0.17
CPSF4-209ENST00000465132 MRGPRGQ86SM5 289 aa16.09■□□□□ 0.17
CPSF4-209ENST00000465132 ADAMTS15Q8TE58 950 aa16.09■□□□□ 0.17
CPSF4-209ENST00000465132 NEURL3Q96EH8 262 aa16.09■□□□□ 0.17
CPSF4-209ENST00000465132 LCORQ96JN0 433 aaPredicted RBP16.09■□□□□ 0.17
CPSF4-209ENST00000465132 SLC35G5Q96KT7 338 aa16.09■□□□□ 0.17
CPSF4-209ENST00000465132 ACTRT3Q9BYD9 372 aa16.09■□□□□ 0.17
CPSF4-209ENST00000465132 SIRT3Q9NTG7 399 aaPredicted RBP16.09■□□□□ 0.17
CPSF4-209ENST00000465132 EXD2Q9NVH0 621 aa16.09■□□□□ 0.17
CPSF4-209ENST00000465132 OR10H1Q9Y4A9 318 aa16.09■□□□□ 0.17
CPSF4-209ENST00000465132 CPAMD8Q8IZJ3 1885 aa16.08■□□□□ 0.17
CPSF4-209ENST00000465132 NUP214P35658 2090 aaPredicted RBP16.08■□□□□ 0.16
CPSF4-209ENST00000465132 FRG2CA6NGY1 282 aa16.08■□□□□ 0.16
CPSF4-209ENST00000465132 MRASO14807 208 aa16.08■□□□□ 0.16
CPSF4-209ENST00000465132 PSMG1O95456 288 aa16.08■□□□□ 0.16
CPSF4-209ENST00000465132 AK1P00568 194 aa16.08■□□□□ 0.16
CPSF4-209ENST00000465132 NAGAP17050 411 aa16.08■□□□□ 0.16
CPSF4-209ENST00000465132 KHKP50053 298 aa16.08■□□□□ 0.16
CPSF4-209ENST00000465132 SSR4P51571 173 aa16.08■□□□□ 0.16
CPSF4-209ENST00000465132 PMP22Q01453 160 aa16.08■□□□□ 0.16
CPSF4-209ENST00000465132 GNA13Q14344 377 aa16.08■□□□□ 0.16
CPSF4-209ENST00000465132 TRMT5Q32P41 509 aaKnown RBP16.08■□□□□ 0.16
CPSF4-209ENST00000465132 CYP27C1Q4G0S4 372 aa16.08■□□□□ 0.16
CPSF4-209ENST00000465132 ACER2Q5QJU3 275 aa16.08■□□□□ 0.16
CPSF4-209ENST00000465132 ATAD3BQ5T9A4 648 aa16.08■□□□□ 0.16
CPSF4-209ENST00000465132 SLC2A7Q6PXP3 512 aa16.08■□□□□ 0.16
CPSF4-209ENST00000465132 BNC2Q6ZN30 1099 aaPredicted RBP16.08■□□□□ 0.16
CPSF4-209ENST00000465132 DHDDSQ86SQ9 333 aa16.08■□□□□ 0.16
CPSF4-209ENST00000465132 C9orf40Q8IXQ3 194 aa16.08■□□□□ 0.16
CPSF4-209ENST00000465132 ZNF808Q8N4W9 903 aaPredicted RBP16.08■□□□□ 0.16
CPSF4-209ENST00000465132 TMEM156Q8N614 296 aa16.08■□□□□ 0.16
CPSF4-209ENST00000465132 BTBD9Q96Q07 612 aa16.08■□□□□ 0.16
CPSF4-209ENST00000465132 STACQ99469 402 aa16.08■□□□□ 0.16
CPSF4-209ENST00000465132 FOLH1BQ9HBA9 442 aa16.08■□□□□ 0.16
CPSF4-209ENST00000465132 HHATLQ9HCP6 504 aa16.08■□□□□ 0.16
CPSF4-209ENST00000465132 SLC52A3Q9NQ40 469 aa16.08■□□□□ 0.16
CPSF4-209ENST00000465132 SERHLQ9NQF3 203 aa16.08■□□□□ 0.16
CPSF4-209ENST00000465132 DUSP22Q9NRW4 184 aa16.08■□□□□ 0.16
CPSF4-209ENST00000465132 TAGLN3Q9UI15 199 aa16.08■□□□□ 0.16
CPSF4-209ENST00000465132 HRKO00198 91 aa16.07■□□□□ 0.16
CPSF4-209ENST00000465132 ASNA1O43681 348 aa16.07■□□□□ 0.16
CPSF4-209ENST00000465132 ABCB7O75027 752 aa16.07■□□□□ 0.16
CPSF4-209ENST00000465132 WISP2O76076 250 aa16.07■□□□□ 0.16
CPSF4-209ENST00000465132 HMGN2P05204 90 aaKnown RBP16.07■□□□□ 0.16
CPSF4-209ENST00000465132 MLF1P58340 268 aa16.07■□□□□ 0.16
CPSF4-209ENST00000465132 RBPJQ06330 500 aa16.07■□□□□ 0.16
CPSF4-209ENST00000465132 FADDQ13158 208 aa16.07■□□□□ 0.16
CPSF4-209ENST00000465132 ZNF766Q5HY98 468 aa16.07■□□□□ 0.16
CPSF4-209ENST00000465132 MFSD12Q6NUT3 480 aa16.07■□□□□ 0.16
CPSF4-209ENST00000465132 CDC73Q6P1J9 531 aa16.07■□□□□ 0.16
CPSF4-209ENST00000465132 RPTNQ6XPR3 784 aa16.07■□□□□ 0.16
CPSF4-209ENST00000465132 TRPM8Q7Z2W7 1104 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms