RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 SHFQ7M4L6 423 aa6.86□□□□□ -1.31
USP48-206ENST00000464577 FGD2Q7Z6J4 655 aa6.86□□□□□ -1.31
USP48-206ENST00000464577 ADGRD2Q7Z7M1 963 aa6.86□□□□□ -1.31
USP48-206ENST00000464577 GPAT4Q86UL3 456 aa6.86□□□□□ -1.31
USP48-206ENST00000464577 LHFPL3Q86UP9 236 aa6.86□□□□□ -1.31
USP48-206ENST00000464577 KRT78Q8N1N4 520 aa6.86□□□□□ -1.31
USP48-206ENST00000464577 LILRA3Q8N6C8 439 aaPredicted RBP6.86□□□□□ -1.31
USP48-206ENST00000464577 OR9A1PQ8NGU1 263 aa6.86□□□□□ -1.31
USP48-206ENST00000464577 ZNF461Q8TAF7 563 aa6.86□□□□□ -1.31
USP48-206ENST00000464577 SETD7Q8WTS6 366 aaKnown RBP6.86□□□□□ -1.31
USP48-206ENST00000464577 SPRYD4Q8WW59 207 aaPredicted RBP6.86□□□□□ -1.31
USP48-206ENST00000464577 ADAMTS14Q8WXS8 1223 aa6.86□□□□□ -1.31
USP48-206ENST00000464577 TM4SF18Q96CE8 201 aa6.86□□□□□ -1.31
USP48-206ENST00000464577 NXPE2Q96DL1 559 aa6.86□□□□□ -1.31
USP48-206ENST00000464577 SLC35G5Q96KT7 338 aa6.86□□□□□ -1.31
USP48-206ENST00000464577 ZNF578Q96N58 590 aaPredicted RBP6.86□□□□□ -1.31
USP48-206ENST00000464577 RIOK2Q9BVS4 552 aaKnown RBP6.86□□□□□ -1.31
USP48-206ENST00000464577 TEX12Q9BXU0 123 aa6.86□□□□□ -1.31
USP48-206ENST00000464577 ANKRD19PQ9H560 264 aa6.86□□□□□ -1.31
USP48-206ENST00000464577 EPHX3Q9H6B9 360 aa6.86□□□□□ -1.31
USP48-206ENST00000464577 NUDT15Q9NV35 164 aa6.86□□□□□ -1.31
USP48-206ENST00000464577 LYARQ9NX58 379 aaKnown RBP6.86□□□□□ -1.31
USP48-206ENST00000464577 SCP2D1Q9UJQ7 156 aa6.86□□□□□ -1.31
USP48-206ENST00000464577 NPTNQ9Y639 398 aa6.86□□□□□ -1.31
USP48-206ENST00000464577 A0A087WUU8 490 aa6.85□□□□□ -1.31
USP48-206ENST00000464577 C2orf92A0A1B0GVN3 265 aa6.85□□□□□ -1.31
USP48-206ENST00000464577 TSPAN11A1L157 253 aa6.85□□□□□ -1.31
USP48-206ENST00000464577 J3QRE1 110 aa6.85□□□□□ -1.31
USP48-206ENST00000464577 SYT5O00445 386 aa6.85□□□□□ -1.31
USP48-206ENST00000464577 PLPP1O14494 284 aa6.85□□□□□ -1.31
USP48-206ENST00000464577 SURF4O15260 269 aa6.85□□□□□ -1.31
USP48-206ENST00000464577 EEF1E1O43324 174 aaKnown RBP6.85□□□□□ -1.31
USP48-206ENST00000464577 BNIP3LO60238 219 aa6.85□□□□□ -1.31
USP48-206ENST00000464577 SCO1O75880 301 aa6.85□□□□□ -1.31
USP48-206ENST00000464577 SOX30O94993 753 aa6.85□□□□□ -1.31
USP48-206ENST00000464577 EPPINO95925 133 aa6.85□□□□□ -1.31
USP48-206ENST00000464577 ALDH1A1P00352 501 aa6.85□□□□□ -1.31
USP48-206ENST00000464577 TCRBP04435 133 aa6.85□□□□□ -1.31
USP48-206ENST00000464577 URODP06132 367 aa6.85□□□□□ -1.31
USP48-206ENST00000464577 EIF4EP06730 217 aaKnown RBP6.85□□□□□ -1.31
USP48-206ENST00000464577 NR2F1P10589 423 aa6.85□□□□□ -1.31
USP48-206ENST00000464577 ZNF250P15622 560 aa6.85□□□□□ -1.31
USP48-206ENST00000464577 ENPP1P22413 925 aa6.85□□□□□ -1.31
USP48-206ENST00000464577 HOXD10P28358 340 aa6.85□□□□□ -1.31
USP48-206ENST00000464577 PDHA2P29803 388 aa6.85□□□□□ -1.31
USP48-206ENST00000464577 MMP12P39900 470 aa6.85□□□□□ -1.31
USP48-206ENST00000464577 NNMTP40261 264 aa6.85□□□□□ -1.31
USP48-206ENST00000464577 STAT5AP42229 794 aa6.85□□□□□ -1.31
USP48-206ENST00000464577 SOX9P48436 509 aa6.85□□□□□ -1.31
USP48-206ENST00000464577 CCT3P49368 545 aaKnown RBP6.85□□□□□ -1.31
USP48-206ENST00000464577 KHKP50053 298 aa6.85□□□□□ -1.31
USP48-206ENST00000464577 CCL23P55773 120 aa6.85□□□□□ -1.31
USP48-206ENST00000464577 RAB14P61106 215 aa6.85□□□□□ -1.31
USP48-206ENST00000464577 POU6F2P78424 691 aaPredicted RBP6.85□□□□□ -1.31
USP48-206ENST00000464577 HSPB3Q12988 150 aa6.85□□□□□ -1.31
USP48-206ENST00000464577 RPA4Q13156 261 aa6.85□□□□□ -1.31
USP48-206ENST00000464577 CAMK2DQ13557 499 aa6.85□□□□□ -1.31
USP48-206ENST00000464577 GALEQ14376 348 aa6.85□□□□□ -1.31
USP48-206ENST00000464577 TRAM2Q15035 370 aa6.85□□□□□ -1.31
USP48-206ENST00000464577 TRAM1Q15629 374 aa6.85□□□□□ -1.31
USP48-206ENST00000464577 SYPL1Q16563 259 aa6.85□□□□□ -1.31
USP48-206ENST00000464577 ZNF791Q3KP31 576 aaPredicted RBP6.85□□□□□ -1.31
USP48-206ENST00000464577 LGALSLQ3ZCW2 172 aaPredicted RBP6.85□□□□□ -1.31
USP48-206ENST00000464577 SLC36A2Q495M3 483 aa6.85□□□□□ -1.31
USP48-206ENST00000464577 LRRC73Q5JTD7 316 aa6.85□□□□□ -1.31
USP48-206ENST00000464577 PXDC1Q5TGL8 231 aa6.85□□□□□ -1.31
USP48-206ENST00000464577 PRAMEF8Q5VWM4 474 aa6.85□□□□□ -1.31
USP48-206ENST00000464577 PRAMEF7Q5VXH5 474 aa6.85□□□□□ -1.31
USP48-206ENST00000464577 BHLHB9Q6PI77 547 aa6.85□□□□□ -1.31
USP48-206ENST00000464577 LCTLQ6UWM7 567 aa6.85□□□□□ -1.31
USP48-206ENST00000464577 RTL4Q6ZR62 310 aa6.85□□□□□ -1.31
USP48-206ENST00000464577 Q6ZVL8 140 aa6.85□□□□□ -1.31
USP48-206ENST00000464577 ASPGQ86U10 573 aa6.85□□□□□ -1.31
USP48-206ENST00000464577 TPRA1Q86W33 373 aa6.85□□□□□ -1.31
USP48-206ENST00000464577 NR2C2APQ86WQ0 139 aa6.85□□□□□ -1.31
USP48-206ENST00000464577 NPAS4Q8IUM7 802 aa6.85□□□□□ -1.31
USP48-206ENST00000464577 CMIPQ8IY22 773 aa6.85□□□□□ -1.31
USP48-206ENST00000464577 GPR135Q8IZ08 494 aa6.85□□□□□ -1.31
USP48-206ENST00000464577 ARL14EPQ8N8R7 260 aaPredicted RBP6.85□□□□□ -1.31
USP48-206ENST00000464577 GALNT11Q8NCW6 608 aa6.85□□□□□ -1.31
USP48-206ENST00000464577 OR4F15Q8NGB8 312 aa6.85□□□□□ -1.31
USP48-206ENST00000464577 OR6T1Q8NGN1 323 aa6.85□□□□□ -1.31
USP48-206ENST00000464577 SUN3Q8TAQ9 357 aa6.85□□□□□ -1.31
USP48-206ENST00000464577 HSD17B8Q92506 261 aa6.85□□□□□ -1.31
USP48-206ENST00000464577 OSTF1Q92882 214 aa6.85□□□□□ -1.31
USP48-206ENST00000464577 GLYATL1Q969I3 302 aa6.85□□□□□ -1.31
USP48-206ENST00000464577 MSANTD3Q96H12 275 aa6.85□□□□□ -1.31
USP48-206ENST00000464577 SORBS1Q9BX66 1292 aaKnown RBP6.85□□□□□ -1.31
USP48-206ENST00000464577 PINK1Q9BXM7 581 aa6.85□□□□□ -1.31
USP48-206ENST00000464577 PPA2Q9H2U2 334 aa6.85□□□□□ -1.31
USP48-206ENST00000464577 RHBGQ9H310 441 aa6.85□□□□□ -1.31
USP48-206ENST00000464577 OR51I1Q9H343 314 aa6.85□□□□□ -1.31
USP48-206ENST00000464577 PTGFRNQ9P2B2 879 aa6.85□□□□□ -1.31
USP48-206ENST00000464577 ZNF624Q9P2J8 865 aaPredicted RBP6.85□□□□□ -1.31
USP48-206ENST00000464577 KLF15Q9UIH9 416 aa6.85□□□□□ -1.31
USP48-206ENST00000464577 KIF25Q9UIL4 384 aa6.85□□□□□ -1.31
USP48-206ENST00000464577 SLC25A13Q9UJS0 675 aa6.85□□□□□ -1.31
USP48-206ENST00000464577 ENTPD4Q9Y227 616 aa6.85□□□□□ -1.31
USP48-206ENST00000464577 GPR52Q9Y2T5 361 aa6.85□□□□□ -1.31
USP48-206ENST00000464577 THSD7BQ9C0I4 1608 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms