RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 REM1O75628 298 aa15.63■□□□□ 0.09
VPS52-215ENST00000464425 GLSO94925 669 aaPredicted RBP15.63■□□□□ 0.09
VPS52-215ENST00000464425 STSP08842 583 aa15.63■□□□□ 0.09
VPS52-215ENST00000464425 NAGAP17050 411 aa15.63■□□□□ 0.09
VPS52-215ENST00000464425 S100A3P33764 101 aa15.63■□□□□ 0.09
VPS52-215ENST00000464425 PRKAG1P54619 331 aa15.63■□□□□ 0.09
VPS52-215ENST00000464425 FAM174BQ3ZCQ3 159 aa15.63■□□□□ 0.09
VPS52-215ENST00000464425 ANXA8L1Q5VT79 327 aa15.63■□□□□ 0.09
VPS52-215ENST00000464425 PAOXQ6QHF9 649 aa15.63■□□□□ 0.09
VPS52-215ENST00000464425 NUP54Q7Z3B4 507 aa15.63■□□□□ 0.09
VPS52-215ENST00000464425 SZRD1Q7Z422 152 aa15.63■□□□□ 0.09
VPS52-215ENST00000464425 MTERF4Q7Z6M4 381 aaKnown RBP15.63■□□□□ 0.09
VPS52-215ENST00000464425 SLC34A3Q8N130 599 aa15.63■□□□□ 0.09
VPS52-215ENST00000464425 GHDCQ8N2G8 530 aa15.63■□□□□ 0.09
VPS52-215ENST00000464425 TMEM251Q8N6I4 163 aa15.63■□□□□ 0.09
VPS52-215ENST00000464425 VPS37AQ8NEZ2 397 aa15.63■□□□□ 0.09
VPS52-215ENST00000464425 OR4N2Q8NGD1 307 aa15.63■□□□□ 0.09
VPS52-215ENST00000464425 CCT8L2Q96SF2 557 aa15.63■□□□□ 0.09
VPS52-215ENST00000464425 FAM107BQ9H098 131 aa15.63■□□□□ 0.09
VPS52-215ENST00000464425 EQTNQ9NQ60 294 aa15.63■□□□□ 0.09
VPS52-215ENST00000464425 OR10H1Q9Y4A9 318 aa15.63■□□□□ 0.09
VPS52-215ENST00000464425 USP9XQ93008 2570 aaPredicted RBP15.63■□□□□ 0.09
VPS52-215ENST00000464425 LRRK2Q5S007 2527 aa15.62■□□□□ 0.09
VPS52-215ENST00000464425 PRSS51A0A1B0GVH4 220 aa15.62■□□□□ 0.09
VPS52-215ENST00000464425 FAM234BA2RU67 622 aa15.62■□□□□ 0.09
VPS52-215ENST00000464425 SCN2BO60939 215 aa15.62■□□□□ 0.09
VPS52-215ENST00000464425 UGT2B11O75310 529 aa15.62■□□□□ 0.09
VPS52-215ENST00000464425 PSMG1O95456 288 aa15.62■□□□□ 0.09
VPS52-215ENST00000464425 FAM107AO95990 144 aa15.62■□□□□ 0.09
VPS52-215ENST00000464425 PGRP06401 933 aa15.62■□□□□ 0.09
VPS52-215ENST00000464425 RNF224P0DH78 156 aa15.62■□□□□ 0.09
VPS52-215ENST00000464425 MAGEA5P43359 124 aa15.62■□□□□ 0.09
VPS52-215ENST00000464425 ZFP36L2P47974 494 aaKnown RBP15.62■□□□□ 0.09
VPS52-215ENST00000464425 POLR2JP52435 117 aaKnown RBP15.62■□□□□ 0.09
VPS52-215ENST00000464425 WNT3P56703 355 aa15.62■□□□□ 0.09
VPS52-215ENST00000464425 RPP38P78345 283 aaKnown RBP15.62■□□□□ 0.09
VPS52-215ENST00000464425 PHC1P78364 1004 aa15.62■□□□□ 0.09
VPS52-215ENST00000464425 PSG6Q00889 435 aa15.62■□□□□ 0.09
VPS52-215ENST00000464425 LRRC74AQ0VAA2 488 aa15.62■□□□□ 0.09
VPS52-215ENST00000464425 SF3A3Q12874 501 aaKnown RBP eCLIP15.62■□□□□ 0.09
VPS52-215ENST00000464425 C4orf17Q53FE4 359 aa15.62■□□□□ 0.09
VPS52-215ENST00000464425 SPANXN4Q5MJ08 99 aa15.62■□□□□ 0.09
VPS52-215ENST00000464425 FJX1Q86VR8 437 aa15.62■□□□□ 0.09
VPS52-215ENST00000464425 SPPL2CQ8IUH8 684 aa15.62■□□□□ 0.09
VPS52-215ENST00000464425 PSMA8Q8TAA3 256 aa15.62■□□□□ 0.09
VPS52-215ENST00000464425 OR5P2Q8WZ92 322 aa15.62■□□□□ 0.09
VPS52-215ENST00000464425 HGDQ93099 445 aa15.62■□□□□ 0.09
VPS52-215ENST00000464425 NODALQ96S42 347 aa15.62■□□□□ 0.09
VPS52-215ENST00000464425 ADOQ96SZ5 270 aa15.62■□□□□ 0.09
VPS52-215ENST00000464425 ZFP64Q9NPA5 681 aa15.62■□□□□ 0.09
VPS52-215ENST00000464425 FAM120CQ9NX05 1096 aaKnown RBP15.62■□□□□ 0.09
VPS52-215ENST00000464425 BOKQ9UMX3 212 aaPredicted RBP15.62■□□□□ 0.09
VPS52-215ENST00000464425 DOPEY2Q9Y3R5 2298 aa15.62■□□□□ 0.09
VPS52-215ENST00000464425 A0A1B0GTH9 108 aa15.61■□□□□ 0.09
VPS52-215ENST00000464425 ANKRD33BA6NCL7 494 aa15.61■□□□□ 0.09
VPS52-215ENST00000464425 C2orf72A6NCS6 295 aa15.61■□□□□ 0.09
VPS52-215ENST00000464425 CELA3AP09093 270 aa15.61■□□□□ 0.09
VPS52-215ENST00000464425 RFPL3SP0C7P2 107 aa15.61■□□□□ 0.09
VPS52-215ENST00000464425 ABOP16442 354 aa15.61■□□□□ 0.09
VPS52-215ENST00000464425 ADSLP30566 484 aaPredicted RBP15.61■□□□□ 0.09
VPS52-215ENST00000464425 KRT20P35900 424 aa15.61■□□□□ 0.09
VPS52-215ENST00000464425 CASP3P42574 277 aa15.61■□□□□ 0.09
VPS52-215ENST00000464425 GAB1Q13480 694 aa15.61■□□□□ 0.09
VPS52-215ENST00000464425 C3AR1Q16581 482 aa15.61■□□□□ 0.09
VPS52-215ENST00000464425 TBCELQ5QJ74 424 aa15.61■□□□□ 0.09
VPS52-215ENST00000464425 OR4F3Q6IEY1 312 aa15.61■□□□□ 0.09
VPS52-215ENST00000464425 BLOC1S3Q6QNY0 202 aa15.61■□□□□ 0.09
VPS52-215ENST00000464425 BNC2Q6ZN30 1099 aaPredicted RBP15.61■□□□□ 0.09
VPS52-215ENST00000464425 MSANTD1Q6ZTZ1 278 aa15.61■□□□□ 0.09
VPS52-215ENST00000464425 FGD2Q7Z6J4 655 aa15.61■□□□□ 0.09
VPS52-215ENST00000464425 FUNDC1Q8IVP5 155 aa15.61■□□□□ 0.09
VPS52-215ENST00000464425 CHERPQ8IWX8 916 aaKnown RBP15.61■□□□□ 0.09
VPS52-215ENST00000464425 FAM109AQ8N4B1 249 aa15.61■□□□□ 0.09
VPS52-215ENST00000464425 NUP43Q8NFH3 380 aa15.61■□□□□ 0.09
VPS52-215ENST00000464425 OR9I1Q8NGQ6 314 aa15.61■□□□□ 0.09
VPS52-215ENST00000464425 SSC4DQ8WTU2 575 aa15.61■□□□□ 0.09
VPS52-215ENST00000464425 EFHD2Q96C19 240 aaPredicted RBP15.61■□□□□ 0.09
VPS52-215ENST00000464425 COL21A1Q96P44 957 aa15.61■□□□□ 0.09
VPS52-215ENST00000464425 SECISBP2Q96T21 854 aaKnown RBP15.61■□□□□ 0.09
VPS52-215ENST00000464425 ANGPTL4Q9BY76 406 aa15.61■□□□□ 0.09
VPS52-215ENST00000464425 METTL7AQ9H8H3 244 aa15.61■□□□□ 0.09
VPS52-215ENST00000464425 ZDHHC11Q9H8X9 412 aa15.61■□□□□ 0.09
VPS52-215ENST00000464425 SAR1AQ9NR31 198 aa15.61■□□□□ 0.09
VPS52-215ENST00000464425 NTMQ9P121 344 aa15.61■□□□□ 0.09
VPS52-215ENST00000464425 SNX8Q9Y5X2 465 aa15.61■□□□□ 0.09
VPS52-215ENST00000464425 A0A1B0GUH1 482 aa15.6■□□□□ 0.09
VPS52-215ENST00000464425 LRRC3CA6NJW4 275 aa15.6■□□□□ 0.09
VPS52-215ENST00000464425 SLC22A2O15244 555 aa15.6■□□□□ 0.09
VPS52-215ENST00000464425 CCDC22O60826 627 aa15.6■□□□□ 0.09
VPS52-215ENST00000464425 TRIM3O75382 744 aaPredicted RBP15.6■□□□□ 0.09
VPS52-215ENST00000464425 SNX4O95219 450 aa15.6■□□□□ 0.09
VPS52-215ENST00000464425 C6orf47O95873 294 aa15.6■□□□□ 0.09
VPS52-215ENST00000464425 IL12BP29460 328 aa15.6■□□□□ 0.09
VPS52-215ENST00000464425 GABRA3P34903 492 aa15.6■□□□□ 0.09
VPS52-215ENST00000464425 MASP1P48740 699 aa15.6■□□□□ 0.09
VPS52-215ENST00000464425 DGKQP52824 942 aa15.6■□□□□ 0.09
VPS52-215ENST00000464425 CASP6P55212 293 aa15.6■□□□□ 0.09
VPS52-215ENST00000464425 RCAN2Q14206 197 aa15.6■□□□□ 0.09
VPS52-215ENST00000464425 SLC10A1Q14973 349 aa15.6■□□□□ 0.09
VPS52-215ENST00000464425 ZNHIT3Q15649 155 aaPredicted RBP15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms