RNA–Protein interactions for RNA: ENST00000464168.5

USP4-208, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 4

Gene USP4, Length 601 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-208ENST00000464168 ROS1P08922 2347 aa20.45■□□□□ 0.86
USP4-208ENST00000464168 A8MT66 165 aa20.44■□□□□ 0.86
USP4-208ENST00000464168 MANBAO00462 879 aa20.44■□□□□ 0.86
USP4-208ENST00000464168 SMNDC1O75940 238 aaKnown RBP eCLIP20.44■□□□□ 0.86
USP4-208ENST00000464168 OR4F21O95013 312 aa20.44■□□□□ 0.86
USP4-208ENST00000464168 INHBAP08476 426 aa20.44■□□□□ 0.86
USP4-208ENST00000464168 IL3P08700 152 aa20.44■□□□□ 0.86
USP4-208ENST00000464168 CHN1P15882 459 aa20.44■□□□□ 0.86
USP4-208ENST00000464168 HSD17B3P37058 310 aa20.44■□□□□ 0.86
USP4-208ENST00000464168 MC3RP41968 323 aa20.44■□□□□ 0.86
USP4-208ENST00000464168 Q5PR19 223 aa20.44■□□□□ 0.86
USP4-208ENST00000464168 VWA1Q6PCB0 445 aa20.44■□□□□ 0.86
USP4-208ENST00000464168 ZNF474Q6S9Z5 364 aaPredicted RBP20.44■□□□□ 0.86
USP4-208ENST00000464168 P4HA3Q7Z4N8 544 aa20.44■□□□□ 0.86
USP4-208ENST00000464168 BTLAQ7Z6A9 289 aa20.44■□□□□ 0.86
USP4-208ENST00000464168 RELL1Q8IUW5 271 aa20.44■□□□□ 0.86
USP4-208ENST00000464168 LRRC75A-AS1Q8N1F1 130 aa20.44■□□□□ 0.86
USP4-208ENST00000464168 GBP7Q8N8V2 638 aaPredicted RBP20.44■□□□□ 0.86
USP4-208ENST00000464168 PIP5K1AQ99755 562 aa20.44■□□□□ 0.86
USP4-208ENST00000464168 KLHL28Q9NXS3 571 aa20.44■□□□□ 0.86
USP4-208ENST00000464168 MCM8Q9UJA3 840 aa20.44■□□□□ 0.86
USP4-208ENST00000464168 SLC22A20A6NK97 555 aa20.43■□□□□ 0.86
USP4-208ENST00000464168 SMPD2O60906 423 aa20.43■□□□□ 0.86
USP4-208ENST00000464168 LY6G6DO95868 133 aa20.43■□□□□ 0.86
USP4-208ENST00000464168 IL12BP29460 328 aa20.43■□□□□ 0.86
USP4-208ENST00000464168 KRT20P35900 424 aa20.43■□□□□ 0.86
USP4-208ENST00000464168 CD79BP40259 229 aa20.43■□□□□ 0.86
USP4-208ENST00000464168 KIR2DL2P43627 348 aaPredicted RBP20.43■□□□□ 0.86
USP4-208ENST00000464168 SERPINB9P50453 376 aa20.43■□□□□ 0.86
USP4-208ENST00000464168 PNLIPRP2P54317 469 aa20.43■□□□□ 0.86
USP4-208ENST00000464168 CLDN15P56746 228 aa20.43■□□□□ 0.86
USP4-208ENST00000464168 RAE1P78406 368 aaKnown RBP20.43■□□□□ 0.86
USP4-208ENST00000464168 ERCC6LQ2NKX8 1250 aa20.43■□□□□ 0.86
USP4-208ENST00000464168 OR2A2Q6IF42 318 aa20.43■□□□□ 0.86
USP4-208ENST00000464168 P3H2Q8IVL5 708 aa20.43■□□□□ 0.86
USP4-208ENST00000464168 CIARTQ8N365 385 aaPredicted RBP20.43■□□□□ 0.86
USP4-208ENST00000464168 CDYL2Q8N8U2 506 aa20.43■□□□□ 0.86
USP4-208ENST00000464168 CNEP1R1Q8N9A8 125 aa20.43■□□□□ 0.86
USP4-208ENST00000464168 OR4N2Q8NGD1 307 aa20.43■□□□□ 0.86
USP4-208ENST00000464168 EXOSC8Q96B26 276 aaKnown RBP20.43■□□□□ 0.86
USP4-208ENST00000464168 EFHD2Q96C19 240 aaPredicted RBP20.43■□□□□ 0.86
USP4-208ENST00000464168 COX4I2Q96KJ9 171 aa20.43■□□□□ 0.86
USP4-208ENST00000464168 PAFAH2Q99487 392 aa20.43■□□□□ 0.86
USP4-208ENST00000464168 FOLH1BQ9HBA9 442 aa20.43■□□□□ 0.86
USP4-208ENST00000464168 FAM171A2A8MVW0 826 aa20.42■□□□□ 0.86
USP4-208ENST00000464168 PLOD3O60568 738 aa20.42■□□□□ 0.86
USP4-208ENST00000464168 HSD3B1P14060 373 aa20.42■□□□□ 0.86
USP4-208ENST00000464168 HSD3B2P26439 372 aa20.42■□□□□ 0.86
USP4-208ENST00000464168 DSCR4P56555 118 aaPredicted RBP20.42■□□□□ 0.86
USP4-208ENST00000464168 PSPHP78330 225 aa20.42■□□□□ 0.86
USP4-208ENST00000464168 CLCQ05315 142 aa20.42■□□□□ 0.86
USP4-208ENST00000464168 CHMP1BQ7LBR1 199 aa20.42■□□□□ 0.86
USP4-208ENST00000464168 SLC44A2Q8IWA5 706 aaPredicted RBP20.42■□□□□ 0.86
USP4-208ENST00000464168 UBQLNLQ8IYU4 475 aa20.42■□□□□ 0.86
USP4-208ENST00000464168 SAMD14Q8IZD0 417 aaPredicted RBP20.42■□□□□ 0.86
USP4-208ENST00000464168 FADS6Q8N9I5 356 aa20.42■□□□□ 0.86
USP4-208ENST00000464168 OR4K17Q8NGC6 315 aa20.42■□□□□ 0.86
USP4-208ENST00000464168 PIGTQ969N2 578 aa20.42■□□□□ 0.86
USP4-208ENST00000464168 PGM2Q96G03 612 aa20.42■□□□□ 0.86
USP4-208ENST00000464168 FAM111AQ96PZ2 611 aa20.42■□□□□ 0.86
USP4-208ENST00000464168 OPN3Q9H1Y3 402 aaPredicted RBP20.42■□□□□ 0.86
USP4-208ENST00000464168 DSN1Q9H410 356 aa20.42■□□□□ 0.86
USP4-208ENST00000464168 HIVEP2P31629 2446 aa20.42■□□□□ 0.86
USP4-208ENST00000464168 FBN3Q75N90 2809 aa20.41■□□□□ 0.86
USP4-208ENST00000464168 PCDH7O60245 1069 aa20.41■□□□□ 0.86
USP4-208ENST00000464168 KRT6AP02538 564 aa20.41■□□□□ 0.86
USP4-208ENST00000464168 KRT6BP04259 564 aa20.41■□□□□ 0.86
USP4-208ENST00000464168 PEPDP12955 493 aa20.41■□□□□ 0.86
USP4-208ENST00000464168 CRYGSP22914 178 aa20.41■□□□□ 0.86
USP4-208ENST00000464168 UGT2B10P36537 528 aa20.41■□□□□ 0.86
USP4-208ENST00000464168 KRT6CP48668 564 aa20.41■□□□□ 0.86
USP4-208ENST00000464168 ETF1P62495 437 aaKnown RBP20.41■□□□□ 0.86
USP4-208ENST00000464168 ACKR1Q16570 336 aa20.41■□□□□ 0.86
USP4-208ENST00000464168 SYT10Q6XYQ8 523 aa20.41■□□□□ 0.86
USP4-208ENST00000464168 OR7G2Q8NG99 324 aa20.41■□□□□ 0.86
USP4-208ENST00000464168 FIG4Q92562 907 aa20.41■□□□□ 0.86
USP4-208ENST00000464168 PIK3IP1Q96FE7 263 aa20.41■□□□□ 0.86
USP4-208ENST00000464168 MED18Q9BUE0 208 aa20.41■□□□□ 0.86
USP4-208ENST00000464168 SLC35C2Q9NQQ7 365 aa20.41■□□□□ 0.86
USP4-208ENST00000464168 ZNF226Q9NYT6 803 aa20.41■□□□□ 0.86
USP4-208ENST00000464168 TRIM49D1C9J1S8 452 aa20.4■□□□□ 0.86
USP4-208ENST00000464168 H0YC42 278 aa20.4■□□□□ 0.86
USP4-208ENST00000464168 H7C1Q1 480 aa20.4■□□□□ 0.86
USP4-208ENST00000464168 CGAP01215 116 aa20.4■□□□□ 0.86
USP4-208ENST00000464168 CCKARP32238 428 aa20.4■□□□□ 0.86
USP4-208ENST00000464168 EVI2BP34910 448 aa20.4■□□□□ 0.86
USP4-208ENST00000464168 SUCLG1P53597 346 aaKnown RBP20.4■□□□□ 0.86
USP4-208ENST00000464168 TPD52P55327 224 aaPredicted RBP20.4■□□□□ 0.86
USP4-208ENST00000464168 MRPS22P82650 360 aaKnown RBP20.4■□□□□ 0.86
USP4-208ENST00000464168 CSTF3Q12996 717 aaKnown RBP20.4■□□□□ 0.86
USP4-208ENST00000464168 RASA2Q15283 850 aa20.4■□□□□ 0.86
USP4-208ENST00000464168 UNC50Q53HI1 259 aa20.4■□□□□ 0.86
USP4-208ENST00000464168 C8orf74Q6P047 294 aa20.4■□□□□ 0.86
USP4-208ENST00000464168 PRSS57Q6UWY2 283 aa20.4■□□□□ 0.86
USP4-208ENST00000464168 TAOK1Q7L7X3 1001 aa20.4■□□□□ 0.86
USP4-208ENST00000464168 OR2M3Q8NG83 312 aa20.4■□□□□ 0.86
USP4-208ENST00000464168 C16orf78Q8WTQ4 265 aa20.4■□□□□ 0.86
USP4-208ENST00000464168 DCAKDQ8WVC6 231 aa20.4■□□□□ 0.86
USP4-208ENST00000464168 MTBPQ96DY7 904 aa20.4■□□□□ 0.86
USP4-208ENST00000464168 MARK4Q96L34 752 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms