RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 TFECO14948 347 aaPredicted RBP16.19■□□□□ 0.18
VPS52-214ENST00000463486 ABCB7O75027 752 aa16.19■□□□□ 0.18
VPS52-214ENST00000463486 ICOSLGO75144 302 aa16.19■□□□□ 0.18
VPS52-214ENST00000463486 SNX4O95219 450 aa16.19■□□□□ 0.18
VPS52-214ENST00000463486 ZIC2O95409 532 aaPredicted RBP16.19■□□□□ 0.18
VPS52-214ENST00000463486 IGHG3P01860 377 aa16.19■□□□□ 0.18
VPS52-214ENST00000463486 HMGN2P05204 90 aaKnown RBP16.19■□□□□ 0.18
VPS52-214ENST00000463486 RNF224P0DH78 156 aa16.19■□□□□ 0.18
VPS52-214ENST00000463486 GABRA3P34903 492 aa16.19■□□□□ 0.18
VPS52-214ENST00000463486 MAGEA5P43359 124 aa16.19■□□□□ 0.18
VPS52-214ENST00000463486 KIR3DL1P43629 444 aa16.19■□□□□ 0.18
VPS52-214ENST00000463486 CCT3P49368 545 aaKnown RBP16.19■□□□□ 0.18
VPS52-214ENST00000463486 PRKAG1P54619 331 aa16.19■□□□□ 0.18
VPS52-214ENST00000463486 GAS1P54826 345 aa16.19■□□□□ 0.18
VPS52-214ENST00000463486 KCNJ2P63252 427 aa16.19■□□□□ 0.18
VPS52-214ENST00000463486 SNTA1Q13424 505 aa16.19■□□□□ 0.18
VPS52-214ENST00000463486 PDCD4Q53EL6 469 aaKnown RBP16.19■□□□□ 0.18
VPS52-214ENST00000463486 ZCCHC12Q6PEW1 402 aa16.19■□□□□ 0.18
VPS52-214ENST00000463486 Q6ZPB1 254 aaPredicted RBP16.19■□□□□ 0.18
VPS52-214ENST00000463486 CDRT4Q8N9R6 151 aa16.19■□□□□ 0.18
VPS52-214ENST00000463486 PIK3R3Q92569 461 aa16.19■□□□□ 0.18
VPS52-214ENST00000463486 EFHD2Q96C19 240 aaPredicted RBP16.19■□□□□ 0.18
VPS52-214ENST00000463486 MARK4Q96L34 752 aa16.19■□□□□ 0.18
VPS52-214ENST00000463486 MS4A4EQ96PG1 132 aa16.19■□□□□ 0.18
VPS52-214ENST00000463486 DOHHQ9BU89 302 aa16.19■□□□□ 0.18
VPS52-214ENST00000463486 DEFB127Q9H1M4 99 aa16.19■□□□□ 0.18
VPS52-214ENST00000463486 UBQLN3Q9H347 655 aa16.19■□□□□ 0.18
VPS52-214ENST00000463486 ZNF703Q9H7S9 590 aaPredicted RBP16.19■□□□□ 0.18
VPS52-214ENST00000463486 EQTNQ9NQ60 294 aa16.19■□□□□ 0.18
VPS52-214ENST00000463486 ZCCHC3Q9NUD5 404 aaKnown RBP16.19■□□□□ 0.18
VPS52-214ENST00000463486 ERRFI1Q9UJM3 462 aaPredicted RBP16.19■□□□□ 0.18
VPS52-214ENST00000463486 CBLCQ9ULV8 474 aa16.19■□□□□ 0.18
VPS52-214ENST00000463486 DNAJC13O75165 2243 aa16.19■□□□□ 0.18
VPS52-214ENST00000463486 GTF3C1Q12789 2109 aa16.19■□□□□ 0.18
VPS52-214ENST00000463486 NCKAP5O14513 1909 aa16.19■□□□□ 0.18
VPS52-214ENST00000463486 E9PBE3 544 aa16.18■□□□□ 0.18
VPS52-214ENST00000463486 ATP8B1O43520 1251 aa16.18■□□□□ 0.18
VPS52-214ENST00000463486 FADS1O60427 444 aa16.18■□□□□ 0.18
VPS52-214ENST00000463486 EDF1O60869 148 aaKnown RBP16.18■□□□□ 0.18
VPS52-214ENST00000463486 DIAPH2O60879 1101 aa16.18■□□□□ 0.18
VPS52-214ENST00000463486 IL33O95760 270 aa16.18■□□□□ 0.18
VPS52-214ENST00000463486 CYP4B1P13584 511 aa16.18■□□□□ 0.18
VPS52-214ENST00000463486 IDO1P14902 403 aa16.18■□□□□ 0.18
VPS52-214ENST00000463486 DGKQP52824 942 aa16.18■□□□□ 0.18
VPS52-214ENST00000463486 CLNS1AP54105 237 aaKnown RBP16.18■□□□□ 0.18
VPS52-214ENST00000463486 AQP5P55064 265 aa16.18■□□□□ 0.18
VPS52-214ENST00000463486 UBAP2LQ14157 1087 aaKnown RBP16.18■□□□□ 0.18
VPS52-214ENST00000463486 ELOAQ14241 798 aaKnown RBP16.18■□□□□ 0.18
VPS52-214ENST00000463486 DUSP5Q16690 384 aa16.18■□□□□ 0.18
VPS52-214ENST00000463486 FAM174BQ3ZCQ3 159 aa16.18■□□□□ 0.18
VPS52-214ENST00000463486 NXNQ6DKJ4 435 aa16.18■□□□□ 0.18
VPS52-214ENST00000463486 SLC22A16Q86VW1 577 aa16.18■□□□□ 0.18
VPS52-214ENST00000463486 ANKRD46Q86W74 232 aa16.18■□□□□ 0.18
VPS52-214ENST00000463486 GHDCQ8N2G8 530 aa16.18■□□□□ 0.18
VPS52-214ENST00000463486 FAM109AQ8N4B1 249 aa16.18■□□□□ 0.18
VPS52-214ENST00000463486 FAM26EQ8N5C1 309 aa16.18■□□□□ 0.18
VPS52-214ENST00000463486 WDSUB1Q8N9V3 476 aa16.18■□□□□ 0.18
VPS52-214ENST00000463486 SFXN5Q8TD22 340 aa16.18■□□□□ 0.18
VPS52-214ENST00000463486 RELTQ969Z4 430 aa16.18■□□□□ 0.18
VPS52-214ENST00000463486 TMEM41AQ96HV5 264 aa16.18■□□□□ 0.18
VPS52-214ENST00000463486 SERHL2Q9H4I8 314 aa16.18■□□□□ 0.18
VPS52-214ENST00000463486 GALNT9Q9HCQ5 603 aa16.18■□□□□ 0.18
VPS52-214ENST00000463486 NEUROD4Q9HD90 331 aa16.18■□□□□ 0.18
VPS52-214ENST00000463486 Q9N2J8 555 aa16.18■□□□□ 0.18
VPS52-214ENST00000463486 FLRT3Q9NZU0 649 aa16.18■□□□□ 0.18
VPS52-214ENST00000463486 OR10H1Q9Y4A9 318 aa16.18■□□□□ 0.18
VPS52-214ENST00000463486 LIPGQ9Y5X9 500 aa16.18■□□□□ 0.18
VPS52-214ENST00000463486 DOPEY2Q9Y3R5 2298 aa16.18■□□□□ 0.18
VPS52-214ENST00000463486 SPTBN1Q01082 2364 aaKnown RBP16.18■□□□□ 0.18
VPS52-214ENST00000463486 A0A1B0GVC2 190 aa16.17■□□□□ 0.18
VPS52-214ENST00000463486 C2orf72A6NCS6 295 aa16.17■□□□□ 0.18
VPS52-214ENST00000463486 UBDO15205 165 aa16.17■□□□□ 0.18
VPS52-214ENST00000463486 SLC19A2O60779 497 aa16.17■□□□□ 0.18
VPS52-214ENST00000463486 C1QCP02747 245 aa16.17■□□□□ 0.18
VPS52-214ENST00000463486 MRPL19P49406 292 aaKnown RBP16.17■□□□□ 0.18
VPS52-214ENST00000463486 MRPS22P82650 360 aaKnown RBP16.17■□□□□ 0.18
VPS52-214ENST00000463486 PRR5P85299 388 aa16.17■□□□□ 0.18
VPS52-214ENST00000463486 PLGLB1Q02325 96 aa16.17■□□□□ 0.18
VPS52-214ENST00000463486 EFR3AQ14156 821 aa16.17■□□□□ 0.18
VPS52-214ENST00000463486 GSTA3Q16772 222 aa16.17■□□□□ 0.18
VPS52-214ENST00000463486 DPY19L1Q2PZI1 675 aa16.17■□□□□ 0.18
VPS52-214ENST00000463486 TIGD3Q6B0B8 471 aa16.17■□□□□ 0.18
VPS52-214ENST00000463486 SLC30A6Q6NXT4 461 aa16.17■□□□□ 0.18
VPS52-214ENST00000463486 SPPL2CQ8IUH8 684 aa16.17■□□□□ 0.18
VPS52-214ENST00000463486 CLEC4FQ8N1N0 589 aa16.17■□□□□ 0.18
VPS52-214ENST00000463486 GOT1L1Q8NHS2 421 aaPredicted RBP16.17■□□□□ 0.18
VPS52-214ENST00000463486 FBXO30Q8TB52 745 aa16.17■□□□□ 0.18
VPS52-214ENST00000463486 CCDC115Q96NT0 180 aa16.17■□□□□ 0.18
VPS52-214ENST00000463486 GNRHR2Q96P88 292 aa16.17■□□□□ 0.18
VPS52-214ENST00000463486 YIPF4Q9BSR8 244 aa16.17■□□□□ 0.18
VPS52-214ENST00000463486 RTN4RQ9BZR6 473 aa16.17■□□□□ 0.18
VPS52-214ENST00000463486 TCF7L2Q9NQB0 619 aa16.17■□□□□ 0.18
VPS52-214ENST00000463486 FBXO34Q9NWN3 711 aa16.17■□□□□ 0.18
VPS52-214ENST00000463486 GIN1Q9NXP7 522 aa16.17■□□□□ 0.18
VPS52-214ENST00000463486 BOKQ9UMX3 212 aaPredicted RBP16.17■□□□□ 0.18
VPS52-214ENST00000463486 SNX8Q9Y5X2 465 aa16.17■□□□□ 0.18
VPS52-214ENST00000463486 KCNE3Q9Y6H6 103 aa16.17■□□□□ 0.18
VPS52-214ENST00000463486 DIDO1Q9BTC0 2240 aaKnown RBP16.17■□□□□ 0.18
VPS52-214ENST00000463486 A0A1B0GTH9 108 aa16.16■□□□□ 0.18
VPS52-214ENST00000463486 PRAMEF25A6NGN4 478 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms