RNA–Protein interactions for RNA: ENST00000463244.6

CPSF7-209, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-209ENST00000463244 ZNF550Q7Z398 422 aa18.72■□□□□ 0.59
CPSF7-209ENST00000463244 PLD6Q8N2A8 252 aaKnown RBP18.72■□□□□ 0.59
CPSF7-209ENST00000463244 LRRN4CLQ8ND94 238 aa18.72■□□□□ 0.59
CPSF7-209ENST00000463244 OR4F6Q8NGB9 312 aa18.72■□□□□ 0.59
CPSF7-209ENST00000463244 FIG4Q92562 907 aa18.72■□□□□ 0.59
CPSF7-209ENST00000463244 MRRFQ96E11 262 aaKnown RBP18.72■□□□□ 0.59
CPSF7-209ENST00000463244 SLC39A3Q9BRY0 314 aa18.72■□□□□ 0.59
CPSF7-209ENST00000463244 ANKRA2Q9H9E1 313 aa18.72■□□□□ 0.59
CPSF7-209ENST00000463244 FARSBQ9NSD9 589 aaKnown RBP18.72■□□□□ 0.59
CPSF7-209ENST00000463244 CUBNO60494 3623 aa18.72■□□□□ 0.59
CPSF7-209ENST00000463244 PRR14LQ5THK1 2151 aa18.71■□□□□ 0.59
CPSF7-209ENST00000463244 C17orf51A8MQB3 221 aa18.71■□□□□ 0.59
CPSF7-209ENST00000463244 C16orf97H3BN30 126 aa18.71■□□□□ 0.59
CPSF7-209ENST00000463244 CGAP01215 116 aa18.71■□□□□ 0.59
CPSF7-209ENST00000463244 PEPDP12955 493 aa18.71■□□□□ 0.59
CPSF7-209ENST00000463244 TYK2P29597 1187 aa18.71■□□□□ 0.59
CPSF7-209ENST00000463244 ALDH9A1P49189 494 aa18.71■□□□□ 0.59
CPSF7-209ENST00000463244 DSCR4P56555 118 aaPredicted RBP18.71■□□□□ 0.59
CPSF7-209ENST00000463244 CLDN15P56746 228 aa18.71■□□□□ 0.59
CPSF7-209ENST00000463244 NPSR1Q6W5P4 371 aa18.71■□□□□ 0.59
CPSF7-209ENST00000463244 LARP4Q71RC2 724 aaKnown RBP eCLIP18.71■□□□□ 0.59
CPSF7-209ENST00000463244 CXXC5Q7LFL8 322 aaKnown RBP18.71■□□□□ 0.59
CPSF7-209ENST00000463244 MILR1Q7Z6M3 343 aa18.71■□□□□ 0.59
CPSF7-209ENST00000463244 UBQLNLQ8IYU4 475 aa18.71■□□□□ 0.59
CPSF7-209ENST00000463244 SPATA4Q8NEY3 305 aa18.71■□□□□ 0.59
CPSF7-209ENST00000463244 SPATA3Q8NHX4 192 aa18.71■□□□□ 0.59
CPSF7-209ENST00000463244 ERP27Q96DN0 273 aa18.71■□□□□ 0.59
CPSF7-209ENST00000463244 ZNF845Q96IR2 970 aaPredicted RBP18.71■□□□□ 0.59
CPSF7-209ENST00000463244 VSTM2LQ96N03 204 aa18.71■□□□□ 0.59
CPSF7-209ENST00000463244 PIGQQ9BRB3 760 aa18.71■□□□□ 0.59
CPSF7-209ENST00000463244 FAIM2Q9BWQ8 316 aa18.71■□□□□ 0.59
CPSF7-209ENST00000463244 BRF2Q9HAW0 419 aa18.71■□□□□ 0.59
CPSF7-209ENST00000463244 TRPS1Q9UHF7 1281 aa18.71■□□□□ 0.59
CPSF7-209ENST00000463244 UTS2RQ9UKP6 389 aa18.71■□□□□ 0.59
CPSF7-209ENST00000463244 EMC8O43402 210 aa18.7■□□□□ 0.58
CPSF7-209ENST00000463244 NME6O75414 186 aaPredicted RBP18.7■□□□□ 0.58
CPSF7-209ENST00000463244 BCAS2O75934 225 aaPredicted RBP18.7■□□□□ 0.58
CPSF7-209ENST00000463244 CNOT4O95628 575 aaKnown RBP18.7■□□□□ 0.58
CPSF7-209ENST00000463244 PDYNP01213 254 aa18.7■□□□□ 0.58
CPSF7-209ENST00000463244 CD8BP10966 210 aa18.7■□□□□ 0.58
CPSF7-209ENST00000463244 IL12BP29460 328 aa18.7■□□□□ 0.58
CPSF7-209ENST00000463244 KCNJ5P48544 419 aa18.7■□□□□ 0.58
CPSF7-209ENST00000463244 PTH2RP49190 550 aa18.7■□□□□ 0.58
CPSF7-209ENST00000463244 SERPINB8P50452 374 aa18.7■□□□□ 0.58
CPSF7-209ENST00000463244 PNLIPRP2P54317 469 aa18.7■□□□□ 0.58
CPSF7-209ENST00000463244 TRA2BP62995 288 aaKnown RBP18.7■□□□□ 0.58
CPSF7-209ENST00000463244 SIRPAP78324 504 aa18.7■□□□□ 0.58
CPSF7-209ENST00000463244 PSPHP78330 225 aa18.7■□□□□ 0.58
CPSF7-209ENST00000463244 ZDHHC24Q6UX98 284 aa18.7■□□□□ 0.58
CPSF7-209ENST00000463244 C22orf34Q6ZV56 151 aa18.7■□□□□ 0.58
CPSF7-209ENST00000463244 MEIOBQ8N635 442 aa18.7■□□□□ 0.58
CPSF7-209ENST00000463244 OR4K17Q8NGC6 315 aa18.7■□□□□ 0.58
CPSF7-209ENST00000463244 IGFBPL1Q8WX77 278 aa18.7■□□□□ 0.58
CPSF7-209ENST00000463244 ZC3HAV1LQ96H79 300 aaKnown RBP18.7■□□□□ 0.58
CPSF7-209ENST00000463244 VPS11Q9H270 941 aa18.7■□□□□ 0.58
CPSF7-209ENST00000463244 ADAM21Q9UKJ8 722 aa18.7■□□□□ 0.58
CPSF7-209ENST00000463244 TMCO1Q9UM00 188 aa18.7■□□□□ 0.58
CPSF7-209ENST00000463244 UTP11Q9Y3A2 253 aaKnown RBP18.7■□□□□ 0.58
CPSF7-209ENST00000463244 RBP1P09455 135 aa18.69■□□□□ 0.58
CPSF7-209ENST00000463244 KRT20P35900 424 aa18.69■□□□□ 0.58
CPSF7-209ENST00000463244 SUCLG1P53597 346 aaKnown RBP18.69■□□□□ 0.58
CPSF7-209ENST00000463244 EEFSECP57772 596 aaKnown RBP18.69■□□□□ 0.58
CPSF7-209ENST00000463244 TRADDQ15628 312 aa18.69■□□□□ 0.58
CPSF7-209ENST00000463244 UAP1Q16222 522 aaPredicted RBP18.69■□□□□ 0.58
CPSF7-209ENST00000463244 LETMD1Q6P1Q0 360 aa18.69■□□□□ 0.58
CPSF7-209ENST00000463244 CCDC116Q8IYX3 515 aa18.69■□□□□ 0.58
CPSF7-209ENST00000463244 C1orf52Q8N6N3 182 aaKnown RBP18.69■□□□□ 0.58
CPSF7-209ENST00000463244 FADS6Q8N9I5 356 aa18.69■□□□□ 0.58
CPSF7-209ENST00000463244 OR9A2Q8NGT5 310 aa18.69■□□□□ 0.58
CPSF7-209ENST00000463244 SELENOMQ8WWX9 145 aa18.69■□□□□ 0.58
CPSF7-209ENST00000463244 CAVIN3Q969G5 261 aa18.69■□□□□ 0.58
CPSF7-209ENST00000463244 RNF122Q9H9V4 155 aa18.69■□□□□ 0.58
CPSF7-209ENST00000463244 XPR1Q9UBH6 696 aa18.69■□□□□ 0.58
CPSF7-209ENST00000463244 CHD3Q12873 2000 aaKnown RBP18.69■□□□□ 0.58
CPSF7-209ENST00000463244 H0YC42 278 aa18.68■□□□□ 0.58
CPSF7-209ENST00000463244 PPP6CO00743 305 aa18.68■□□□□ 0.58
CPSF7-209ENST00000463244 TNFRSF21O75509 655 aa18.68■□□□□ 0.58
CPSF7-209ENST00000463244 RPS17P08708 135 aaKnown RBP18.68■□□□□ 0.58
CPSF7-209ENST00000463244 PAX1P15863 534 aa18.68■□□□□ 0.58
CPSF7-209ENST00000463244 EVI2BP34910 448 aa18.68■□□□□ 0.58
CPSF7-209ENST00000463244 TPD52P55327 224 aaPredicted RBP18.68■□□□□ 0.58
CPSF7-209ENST00000463244 FGFBP1Q14512 234 aa18.68■□□□□ 0.58
CPSF7-209ENST00000463244 GUSBP1Q15486 140 aa18.68■□□□□ 0.58
CPSF7-209ENST00000463244 RAET1LQ5VY80 246 aa18.68■□□□□ 0.58
CPSF7-209ENST00000463244 PLEKHM3Q6ZWE6 761 aa18.68■□□□□ 0.58
CPSF7-209ENST00000463244 RPS27LQ71UM5 84 aaKnown RBP18.68■□□□□ 0.58
CPSF7-209ENST00000463244 KAT2AQ92830 837 aa18.68■□□□□ 0.58
CPSF7-209ENST00000463244 EFHD2Q96C19 240 aaPredicted RBP18.68■□□□□ 0.58
CPSF7-209ENST00000463244 PINK1Q9BXM7 581 aa18.68■□□□□ 0.58
CPSF7-209ENST00000463244 DSN1Q9H410 356 aa18.68■□□□□ 0.58
CPSF7-209ENST00000463244 FOLH1BQ9HBA9 442 aa18.68■□□□□ 0.58
CPSF7-209ENST00000463244 PFDN4Q9NQP4 134 aa18.68■□□□□ 0.58
CPSF7-209ENST00000463244 NMRK1Q9NWW6 199 aa18.68■□□□□ 0.58
CPSF7-209ENST00000463244 PPP4R1LQ9P1A2 415 aa18.68■□□□□ 0.58
CPSF7-209ENST00000463244 ZNF175Q9Y473 711 aa18.68■□□□□ 0.58
CPSF7-209ENST00000463244 SMIM24O75264 130 aa18.67■□□□□ 0.58
CPSF7-209ENST00000463244 OTCP00480 354 aa18.67■□□□□ 0.58
CPSF7-209ENST00000463244 CTAGE8P0CG41 777 aa18.67■□□□□ 0.58
CPSF7-209ENST00000463244 MRPS22P82650 360 aaKnown RBP18.67■□□□□ 0.58
CPSF7-209ENST00000463244 C2orf54Q08AI8 447 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms