RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 AK1P00568 194 aa13.26□□□□□ -0.29
COL6A1-202ENST00000463060 CHRM4P08173 479 aa13.26□□□□□ -0.29
COL6A1-202ENST00000463060 ITGAMP11215 1152 aa13.26□□□□□ -0.29
COL6A1-202ENST00000463060 EIF2S3P41091 472 aaKnown RBP13.26□□□□□ -0.29
COL6A1-202ENST00000463060 CRYBA2P53672 197 aa13.26□□□□□ -0.29
COL6A1-202ENST00000463060 POU6F2P78424 691 aaPredicted RBP13.26□□□□□ -0.29
COL6A1-202ENST00000463060 BNIP2Q12982 314 aa13.26□□□□□ -0.29
COL6A1-202ENST00000463060 SCARB2Q14108 478 aa13.26□□□□□ -0.29
COL6A1-202ENST00000463060 ZNHIT3Q15649 155 aaPredicted RBP13.26□□□□□ -0.29
COL6A1-202ENST00000463060 REEP3Q6NUK4 255 aa13.26□□□□□ -0.29
COL6A1-202ENST00000463060 SLC30A8Q8IWU4 369 aa13.26□□□□□ -0.29
COL6A1-202ENST00000463060 OR52E4Q8NGH9 312 aa13.26□□□□□ -0.29
COL6A1-202ENST00000463060 NFKBIDQ8NI38 313 aa13.26□□□□□ -0.29
COL6A1-202ENST00000463060 GPR151Q8TDV0 419 aa13.26□□□□□ -0.29
COL6A1-202ENST00000463060 JADE3Q92613 823 aa13.26□□□□□ -0.29
COL6A1-202ENST00000463060 HSPBAP1Q96EW2 488 aa13.26□□□□□ -0.29
COL6A1-202ENST00000463060 TMEM19Q96HH6 336 aa13.26□□□□□ -0.29
COL6A1-202ENST00000463060 CCNL2Q96S94 520 aaPredicted RBP13.26□□□□□ -0.29
COL6A1-202ENST00000463060 ZNF350Q9GZX5 532 aa13.26□□□□□ -0.29
COL6A1-202ENST00000463060 SLC38A1Q9H2H9 487 aa13.26□□□□□ -0.29
COL6A1-202ENST00000463060 GORASP2Q9H8Y8 452 aa13.26□□□□□ -0.29
COL6A1-202ENST00000463060 LIN28AQ9H9Z2 209 aaKnown RBP13.26□□□□□ -0.29
COL6A1-202ENST00000463060 Q9N2J8 555 aa13.26□□□□□ -0.29
COL6A1-202ENST00000463060 DSPPQ9NZW4 1301 aa13.26□□□□□ -0.29
COL6A1-202ENST00000463060 ACTR3BQ9P1U1 418 aa13.26□□□□□ -0.29
COL6A1-202ENST00000463060 MYOTQ9UBF9 498 aa13.26□□□□□ -0.29
COL6A1-202ENST00000463060 P2RX2Q9UBL9 471 aa13.26□□□□□ -0.29
COL6A1-202ENST00000463060 EGFL7Q9UHF1 273 aa13.26□□□□□ -0.29
COL6A1-202ENST00000463060 FRYQ5TBA9 3013 aa13.25□□□□□ -0.29
COL6A1-202ENST00000463060 CDC14CA4D256 554 aa13.25□□□□□ -0.29
COL6A1-202ENST00000463060 ZNF891A8MT65 544 aaPredicted RBP13.25□□□□□ -0.29
COL6A1-202ENST00000463060 TMEM229AB2RXF0 380 aa13.25□□□□□ -0.29
COL6A1-202ENST00000463060 ARPC2O15144 300 aa13.25□□□□□ -0.29
COL6A1-202ENST00000463060 FCMRO60667 390 aa13.25□□□□□ -0.29
COL6A1-202ENST00000463060 BCHEP06276 602 aa13.25□□□□□ -0.29
COL6A1-202ENST00000463060 NR2F1P10589 423 aa13.25□□□□□ -0.29
COL6A1-202ENST00000463060 KDELR2P33947 212 aa13.25□□□□□ -0.29
COL6A1-202ENST00000463060 NR0B1P51843 470 aaKnown RBP13.25□□□□□ -0.29
COL6A1-202ENST00000463060 PSPHP78330 225 aa13.25□□□□□ -0.29
COL6A1-202ENST00000463060 MRPS22P82650 360 aaKnown RBP13.25□□□□□ -0.29
COL6A1-202ENST00000463060 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.25□□□□□ -0.29
COL6A1-202ENST00000463060 DCST2Q5T1A1 773 aa13.25□□□□□ -0.29
COL6A1-202ENST00000463060 ATAD3BQ5T9A4 648 aa13.25□□□□□ -0.29
COL6A1-202ENST00000463060 GLYATQ6IB77 296 aa13.25□□□□□ -0.29
COL6A1-202ENST00000463060 TCTN3Q6NUS6 607 aa13.25□□□□□ -0.29
COL6A1-202ENST00000463060 LYPD8Q6UX82 237 aa13.25□□□□□ -0.29
COL6A1-202ENST00000463060 C16orf47Q6ZP98 133 aaPredicted RBP13.25□□□□□ -0.29
COL6A1-202ENST00000463060 LRRC74BQ6ZQY2 392 aa13.25□□□□□ -0.29
COL6A1-202ENST00000463060 OLIG3Q7RTU3 272 aa13.25□□□□□ -0.29
COL6A1-202ENST00000463060 KBTBD2Q8IY47 623 aa13.25□□□□□ -0.29
COL6A1-202ENST00000463060 BCORP1Q8N888 145 aa13.25□□□□□ -0.29
COL6A1-202ENST00000463060 COX18Q8N8Q8 333 aa13.25□□□□□ -0.29
COL6A1-202ENST00000463060 FAM13CQ8NE31 585 aa13.25□□□□□ -0.29
COL6A1-202ENST00000463060 HIPK4Q8NE63 616 aa13.25□□□□□ -0.29
COL6A1-202ENST00000463060 TNIP2Q8NFZ5 429 aa13.25□□□□□ -0.29
COL6A1-202ENST00000463060 PMM1Q92871 262 aa13.25□□□□□ -0.29
COL6A1-202ENST00000463060 FER1L6-AS2Q96M78 137 aa13.25□□□□□ -0.29
COL6A1-202ENST00000463060 RAB3IPQ96QF0 476 aaPredicted RBP13.25□□□□□ -0.29
COL6A1-202ENST00000463060 GAL3ST4Q96RP7 486 aa13.25□□□□□ -0.29
COL6A1-202ENST00000463060 LMF1Q96S06 567 aa13.25□□□□□ -0.29
COL6A1-202ENST00000463060 TREX2Q9BQ50 279 aaPredicted RBP13.25□□□□□ -0.29
COL6A1-202ENST00000463060 DEFB126Q9BYW3 111 aa13.25□□□□□ -0.29
COL6A1-202ENST00000463060 MUC13Q9H3R2 512 aa13.25□□□□□ -0.29
COL6A1-202ENST00000463060 ATP13A2Q9NQ11 1180 aa13.25□□□□□ -0.29
COL6A1-202ENST00000463060 POLE3Q9NRF9 147 aa13.25□□□□□ -0.29
COL6A1-202ENST00000463060 CBLCQ9ULV8 474 aa13.25□□□□□ -0.29
COL6A1-202ENST00000463060 SNX13Q9Y5W8 968 aa13.25□□□□□ -0.29
COL6A1-202ENST00000463060 DOCK10Q96BY6 2186 aa13.25□□□□□ -0.29
COL6A1-202ENST00000463060 MED13Q9UHV7 2174 aa13.24□□□□□ -0.29
COL6A1-202ENST00000463060 ASPMQ8IZT6 3477 aa13.24□□□□□ -0.29
COL6A1-202ENST00000463060 A0A0G2JPF8 293 aa13.24□□□□□ -0.29
COL6A1-202ENST00000463060 HNRNPCL2B2RXH8 293 aa13.24□□□□□ -0.29
COL6A1-202ENST00000463060 HNRNPCL3B7ZW38 293 aa13.24□□□□□ -0.29
COL6A1-202ENST00000463060 NPIPB9F8W1W9 429 aa13.24□□□□□ -0.29
COL6A1-202ENST00000463060 CXCR6O00574 342 aa13.24□□□□□ -0.29
COL6A1-202ENST00000463060 SLC28A2O43868 658 aa13.24□□□□□ -0.29
COL6A1-202ENST00000463060 TSPAN2O60636 221 aa13.24□□□□□ -0.29
COL6A1-202ENST00000463060 H6PDO95479 791 aa13.24□□□□□ -0.29
COL6A1-202ENST00000463060 IL33O95760 270 aa13.24□□□□□ -0.29
COL6A1-202ENST00000463060 HNRNPCL4P0DMR1 293 aa13.24□□□□□ -0.29
COL6A1-202ENST00000463060 NCK1P16333 377 aa13.24□□□□□ -0.29
COL6A1-202ENST00000463060 SOX11P35716 441 aa13.24□□□□□ -0.29
COL6A1-202ENST00000463060 MLF1P58340 268 aa13.24□□□□□ -0.29
COL6A1-202ENST00000463060 CHRNEQ04844 493 aa13.24□□□□□ -0.29
COL6A1-202ENST00000463060 CDC20Q12834 499 aa13.24□□□□□ -0.29
COL6A1-202ENST00000463060 AIMP2Q13155 320 aaKnown RBP13.24□□□□□ -0.29
COL6A1-202ENST00000463060 GNA13Q14344 377 aa13.24□□□□□ -0.29
COL6A1-202ENST00000463060 NNATQ16517 81 aa13.24□□□□□ -0.29
COL6A1-202ENST00000463060 CRB2Q5IJ48 1285 aa13.24□□□□□ -0.29
COL6A1-202ENST00000463060 CCNJQ5T5M9 372 aa13.24□□□□□ -0.29
COL6A1-202ENST00000463060 HLA-DQA1Q5Y7H0 255 aa13.24□□□□□ -0.29
COL6A1-202ENST00000463060 LCN8Q6JVE9 175 aa13.24□□□□□ -0.29
COL6A1-202ENST00000463060 JMJD6Q6NYC1 403 aaPredicted RBP13.24□□□□□ -0.29
COL6A1-202ENST00000463060 FRRS1Q6ZNA5 592 aa13.24□□□□□ -0.29
COL6A1-202ENST00000463060 ZAR1Q86SH2 424 aa13.24□□□□□ -0.29
COL6A1-202ENST00000463060 PROSER1Q86XN7 944 aa13.24□□□□□ -0.29
COL6A1-202ENST00000463060 SPACA3Q8IXA5 215 aa13.24□□□□□ -0.29
COL6A1-202ENST00000463060 SLC15A4Q8N697 577 aa13.24□□□□□ -0.29
COL6A1-202ENST00000463060 TMEM102Q8N9M5 508 aaPredicted RBP13.24□□□□□ -0.29
COL6A1-202ENST00000463060 WDR60Q8WVS4 1066 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms