RNA–Protein interactions for RNA: ENST00000462030.5

HPS3-204, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-204ENST00000462030 H7BY64 318 aa17.31■□□□□ 0.36
HPS3-204ENST00000462030 KPNA3O00505 521 aaPredicted RBP17.31■□□□□ 0.36
HPS3-204ENST00000462030 NDUFS4O43181 175 aa17.31■□□□□ 0.36
HPS3-204ENST00000462030 CHP2O43745 196 aa17.31■□□□□ 0.36
HPS3-204ENST00000462030 SLC19A2O60779 497 aa17.31■□□□□ 0.36
HPS3-204ENST00000462030 SLC2A10O95528 541 aa17.31■□□□□ 0.36
HPS3-204ENST00000462030 COL9A2Q14055 689 aaPredicted RBP17.31■□□□□ 0.36
HPS3-204ENST00000462030 LASP1Q14847 261 aaKnown RBP17.31■□□□□ 0.36
HPS3-204ENST00000462030 ESCO2Q56NI9 601 aa17.31■□□□□ 0.36
HPS3-204ENST00000462030 LY6G5CQ5SRR4 150 aa17.31■□□□□ 0.36
HPS3-204ENST00000462030 BCL2L15Q5TBC7 163 aa17.31■□□□□ 0.36
HPS3-204ENST00000462030 NRSN1Q8IZ57 195 aa17.31■□□□□ 0.36
HPS3-204ENST00000462030 PHF21AQ96BD5 680 aa17.31■□□□□ 0.36
HPS3-204ENST00000462030 CHFRQ96EP1 664 aa17.31■□□□□ 0.36
HPS3-204ENST00000462030 PRAP1Q96NZ9 151 aa17.31■□□□□ 0.36
HPS3-204ENST00000462030 COQ7Q99807 217 aa17.31■□□□□ 0.36
HPS3-204ENST00000462030 AIF1LQ9BQI0 150 aa17.31■□□□□ 0.36
HPS3-204ENST00000462030 ZCCHC2Q9C0B9 1178 aaKnown RBP17.31■□□□□ 0.36
HPS3-204ENST00000462030 HCFC1R1Q9NWW0 138 aa17.31■□□□□ 0.36
HPS3-204ENST00000462030 HEATR5BQ9P2D3 2071 aa17.31■□□□□ 0.36
HPS3-204ENST00000462030 KIAA0355O15063 1070 aa17.3■□□□□ 0.36
HPS3-204ENST00000462030 GPR1P46091 355 aa17.3■□□□□ 0.36
HPS3-204ENST00000462030 NCBP2P52298 156 aaKnown RBP eCLIP17.3■□□□□ 0.367e-8■■■■■ 26.9
HPS3-204ENST00000462030 RAB8AP61006 207 aa17.3■□□□□ 0.36
HPS3-204ENST00000462030 RASSF6Q6ZTQ3 369 aa17.3■□□□□ 0.36
HPS3-204ENST00000462030 RAD51AP1Q96B01 352 aa17.3■□□□□ 0.36
HPS3-204ENST00000462030 OR52A5Q9H2C5 316 aa17.3■□□□□ 0.36
HPS3-204ENST00000462030 ISG20L2Q9H9L3 353 aaKnown RBP17.3■□□□□ 0.36
HPS3-204ENST00000462030 BCL2L10Q9HD36 194 aa17.3■□□□□ 0.36
HPS3-204ENST00000462030 ZFR2Q9UPR6 939 aaKnown RBP17.3■□□□□ 0.36
HPS3-204ENST00000462030 NCKAP1Q9Y2A7 1128 aa17.3■□□□□ 0.36
HPS3-204ENST00000462030 SURF4O15260 269 aa17.3■□□□□ 0.36
HPS3-204ENST00000462030 PAPLNO95428 1278 aa17.3■□□□□ 0.36
HPS3-204ENST00000462030 STATHP02808 62 aa17.3■□□□□ 0.36
HPS3-204ENST00000462030 GAAP10253 952 aa17.3■□□□□ 0.36
HPS3-204ENST00000462030 OMPP47874 163 aa17.3■□□□□ 0.36
HPS3-204ENST00000462030 KHKP50053 298 aa17.3■□□□□ 0.36
HPS3-204ENST00000462030 PLA1AQ53H76 456 aa17.3■□□□□ 0.36
HPS3-204ENST00000462030 WDR45BQ5MNZ6 344 aa17.3■□□□□ 0.36
HPS3-204ENST00000462030 PIP5KL1Q5T9C9 394 aa17.3■□□□□ 0.36
HPS3-204ENST00000462030 SUN3Q8TAQ9 357 aa17.3■□□□□ 0.36
HPS3-204ENST00000462030 ART5Q96L15 291 aa17.3■□□□□ 0.36
HPS3-204ENST00000462030 DPH7Q9BTV6 452 aa17.3■□□□□ 0.36
HPS3-204ENST00000462030 BTBD1Q9H0C5 482 aa17.3■□□□□ 0.36
HPS3-204ENST00000462030 DPEP2Q9H4A9 486 aa17.3■□□□□ 0.36
HPS3-204ENST00000462030 DDX31Q9H8H2 851 aaKnown RBP17.3■□□□□ 0.36
HPS3-204ENST00000462030 NTNG1Q9Y2I2 539 aa17.3■□□□□ 0.36
HPS3-204ENST00000462030 ASB4Q9Y574 426 aa17.3■□□□□ 0.36
HPS3-204ENST00000462030 CSNK1G3Q9Y6M4 447 aa17.3■□□□□ 0.36
HPS3-204ENST00000462030 GOLGA4Q13439 2230 aaKnown RBP17.3■□□□□ 0.36
HPS3-204ENST00000462030 SOCS6O14544 535 aa17.29■□□□□ 0.36
HPS3-204ENST00000462030 PQBP1O60828 265 aaKnown RBP17.29■□□□□ 0.36
HPS3-204ENST00000462030 EFCAB14O75071 495 aa17.29■□□□□ 0.36
HPS3-204ENST00000462030 IGHA1P01876 353 aa17.29■□□□□ 0.36
HPS3-204ENST00000462030 EIF4EP06730 217 aaKnown RBP17.29■□□□□ 0.36
HPS3-204ENST00000462030 HK1P19367 917 aa17.29■□□□□ 0.36
HPS3-204ENST00000462030 PTNP21246 168 aa17.29■□□□□ 0.36
HPS3-204ENST00000462030 KELP23276 732 aa17.29■□□□□ 0.36
HPS3-204ENST00000462030 CFL1P23528 166 aaKnown RBP17.29■□□□□ 0.36
HPS3-204ENST00000462030 GPR4P46093 362 aa17.29■□□□□ 0.36
HPS3-204ENST00000462030 ATP12AP54707 1039 aa17.29■□□□□ 0.36
HPS3-204ENST00000462030 DBPQ10586 325 aaPredicted RBP17.29■□□□□ 0.36
HPS3-204ENST00000462030 ZNF750Q32MQ0 723 aa17.29■□□□□ 0.36
HPS3-204ENST00000462030 ZNF322Q6U7Q0 402 aaPredicted RBP17.29■□□□□ 0.36
HPS3-204ENST00000462030 SIRT6Q8N6T7 355 aa17.29■□□□□ 0.36
HPS3-204ENST00000462030 ZG16BQ96DA0 208 aa17.29■□□□□ 0.36
HPS3-204ENST00000462030 C16orf58Q96GQ5 468 aa17.29■□□□□ 0.36
HPS3-204ENST00000462030 DHRS9Q9BPW9 319 aa17.29■□□□□ 0.36
HPS3-204ENST00000462030 SPATA5L1Q9BVQ7 753 aa17.29■□□□□ 0.36
HPS3-204ENST00000462030 SPHK2Q9NRA0 654 aa17.29■□□□□ 0.36
HPS3-204ENST00000462030 ASB6Q9NWX5 421 aa17.29■□□□□ 0.36
HPS3-204ENST00000462030 B3GNT2Q9NY97 397 aa17.29■□□□□ 0.36
HPS3-204ENST00000462030 TRAV6A0A075B6T7 132 aa17.29■□□□□ 0.36
HPS3-204ENST00000462030 CHST10O43529 356 aa17.29■□□□□ 0.36
HPS3-204ENST00000462030 ALDH1A1P00352 501 aa17.29■□□□□ 0.36
HPS3-204ENST00000462030 HMGN2P05204 90 aaKnown RBP17.29■□□□□ 0.36
HPS3-204ENST00000462030 SERPIND1P05546 499 aa17.29■□□□□ 0.36
HPS3-204ENST00000462030 TRHRP34981 398 aaPredicted RBP17.29■□□□□ 0.36
HPS3-204ENST00000462030 BTCP35070 178 aa17.29■□□□□ 0.36
HPS3-204ENST00000462030 NNMTP40261 264 aa17.29■□□□□ 0.36
HPS3-204ENST00000462030 TM4SF4P48230 202 aa17.29■□□□□ 0.36
HPS3-204ENST00000462030 ACSM1Q08AH1 577 aa17.29■□□□□ 0.36
HPS3-204ENST00000462030 TOR2AQ5JU69 321 aa17.29■□□□□ 0.36
HPS3-204ENST00000462030 ZBTB37Q5TC79 503 aa17.29■□□□□ 0.36
HPS3-204ENST00000462030 NDUFAF5Q5TEU4 345 aa17.29■□□□□ 0.36
HPS3-204ENST00000462030 VRK2Q86Y07 508 aa17.29■□□□□ 0.36
HPS3-204ENST00000462030 OR2L2Q8NH16 312 aa17.29■□□□□ 0.36
HPS3-204ENST00000462030 RFKQ969G6 155 aa17.29■□□□□ 0.36
HPS3-204ENST00000462030 RGMAQ96B86 450 aa17.29■□□□□ 0.36
HPS3-204ENST00000462030 NUS1Q96E22 293 aa17.29■□□□□ 0.36
HPS3-204ENST00000462030 TCEAL4Q96EI5 215 aa17.29■□□□□ 0.36
HPS3-204ENST00000462030 PINK1Q9BXM7 581 aa17.29■□□□□ 0.36
HPS3-204ENST00000462030 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.29■□□□□ 0.36
HPS3-204ENST00000462030 IMP3Q9NV31 184 aaKnown RBP17.29■□□□□ 0.36
HPS3-204ENST00000462030 PTGFRNQ9P2B2 879 aa17.29■□□□□ 0.36
HPS3-204ENST00000462030 EXOGQ9Y2C4 368 aaKnown RBP17.29■□□□□ 0.36
HPS3-204ENST00000462030 SIRT4Q9Y6E7 314 aaPredicted RBP17.29■□□□□ 0.36
HPS3-204ENST00000462030 RFPL3O75679 317 aa17.28■□□□□ 0.36
HPS3-204ENST00000462030 FGBP02675 491 aa17.28■□□□□ 0.36
HPS3-204ENST00000462030 ATP6V1E1P36543 226 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms