RNA–Protein interactions for RNA: ENST00000460050.1

THBS3-204, Transcript of thrombospondin 3, humanhuman

TSL 5

Gene THBS3, Length 879 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-204ENST00000460050 TIGD3Q6B0B8 471 aa13.04□□□□□ -0.32
THBS3-204ENST00000460050 SLC30A6Q6NXT4 461 aa13.04□□□□□ -0.32
THBS3-204ENST00000460050 ANGPTL8Q6UXH0 198 aa13.04□□□□□ -0.32
THBS3-204ENST00000460050 LARP4Q71RC2 724 aaKnown RBP eCLIP13.04□□□□□ -0.32
THBS3-204ENST00000460050 SZRD1Q7Z422 152 aa13.04□□□□□ -0.32
THBS3-204ENST00000460050 KRTCAP2Q8N6L1 136 aa13.04□□□□□ -0.32
THBS3-204ENST00000460050 OR5M9Q8NGP3 310 aa13.04□□□□□ -0.32
THBS3-204ENST00000460050 PHF10Q8WUB8 498 aaKnown RBP13.04□□□□□ -0.32
THBS3-204ENST00000460050 EFHD2Q96C19 240 aaPredicted RBP13.04□□□□□ -0.32
THBS3-204ENST00000460050 TMCO6Q96DC7 493 aa13.04□□□□□ -0.32
THBS3-204ENST00000460050 UBQLN3Q9H347 655 aa13.04□□□□□ -0.32
THBS3-204ENST00000460050 ACKR4Q9NPB9 350 aa13.04□□□□□ -0.32
THBS3-204ENST00000460050 EQTNQ9NQ60 294 aa13.04□□□□□ -0.32
THBS3-204ENST00000460050 PNPLA3Q9NST1 481 aa13.04□□□□□ -0.32
THBS3-204ENST00000460050 SPRR3Q9UBC9 169 aa13.04□□□□□ -0.32
THBS3-204ENST00000460050 EIF3LQ9Y262 564 aaKnown RBP13.04□□□□□ -0.32
THBS3-204ENST00000460050 PHF3Q92576 2039 aaKnown RBP13.04□□□□□ -0.32
THBS3-204ENST00000460050 MED12Q93074 2177 aa13.03□□□□□ -0.32
THBS3-204ENST00000460050 ITPR2Q14571 2701 aa13.03□□□□□ -0.32
THBS3-204ENST00000460050 C2orf72A6NCS6 295 aa13.03□□□□□ -0.32
THBS3-204ENST00000460050 SNPHO15079 494 aa13.03□□□□□ -0.32
THBS3-204ENST00000460050 TRAPPC6AO75865 159 aa13.03□□□□□ -0.32
THBS3-204ENST00000460050 LAMP1P11279 417 aa13.03□□□□□ -0.32
THBS3-204ENST00000460050 G6PDP11413 515 aa13.03□□□□□ -0.32
THBS3-204ENST00000460050 CYP4B1P13584 511 aa13.03□□□□□ -0.32
THBS3-204ENST00000460050 ELAVL4P26378 380 aaKnown RBP13.03□□□□□ -0.32
THBS3-204ENST00000460050 PNLIPRP2P54317 469 aa13.03□□□□□ -0.32
THBS3-204ENST00000460050 PRKAG1P54619 331 aa13.03□□□□□ -0.32
THBS3-204ENST00000460050 EMX2Q04743 252 aa13.03□□□□□ -0.32
THBS3-204ENST00000460050 GAB1Q13480 694 aa13.03□□□□□ -0.32
THBS3-204ENST00000460050 ART3Q13508 389 aa13.03□□□□□ -0.32
THBS3-204ENST00000460050 SMU1Q2TAY7 513 aa13.03□□□□□ -0.32
THBS3-204ENST00000460050 CYP27C1Q4G0S4 372 aa13.03□□□□□ -0.32
THBS3-204ENST00000460050 GXYLT1Q4G148 440 aa13.03□□□□□ -0.32
THBS3-204ENST00000460050 XKRXQ6PP77 449 aa13.03□□□□□ -0.32
THBS3-204ENST00000460050 OR1J4Q8NGS1 313 aa13.03□□□□□ -0.32
THBS3-204ENST00000460050 NEIL3Q8TAT5 605 aa13.03□□□□□ -0.32
THBS3-204ENST00000460050 NUDT8Q8WV74 236 aa13.03□□□□□ -0.32
THBS3-204ENST00000460050 SARAFQ96BY9 339 aa13.03□□□□□ -0.32
THBS3-204ENST00000460050 LMF2Q9BU23 707 aaKnown RBP13.03□□□□□ -0.32
THBS3-204ENST00000460050 NUF2Q9BZD4 464 aa13.03□□□□□ -0.32
THBS3-204ENST00000460050 AKTIPQ9H8T0 292 aa13.03□□□□□ -0.32
THBS3-204ENST00000460050 C3orf14Q9HBI5 128 aa13.03□□□□□ -0.32
THBS3-204ENST00000460050 Q9N2J8 555 aa13.03□□□□□ -0.32
THBS3-204ENST00000460050 ATAD3AQ9NVI7 634 aa13.03□□□□□ -0.32
THBS3-204ENST00000460050 PNPOQ9NVS9 261 aa13.03□□□□□ -0.32
THBS3-204ENST00000460050 ASIC5Q9NY37 505 aa13.03□□□□□ -0.32
THBS3-204ENST00000460050 NKIRAS1Q9NYS0 192 aa13.03□□□□□ -0.32
THBS3-204ENST00000460050 NOP53Q9NZM5 478 aaKnown RBP13.03□□□□□ -0.32
THBS3-204ENST00000460050 NTMQ9P121 344 aa13.03□□□□□ -0.32
THBS3-204ENST00000460050 ACAD8Q9UKU7 415 aa13.03□□□□□ -0.32
THBS3-204ENST00000460050 MAPRE3Q9UPY8 281 aa13.03□□□□□ -0.32
THBS3-204ENST00000460050 NOTCH2Q04721 2471 aa13.03□□□□□ -0.32
THBS3-204ENST00000460050 A0A1W2PRB8 838 aa13.02□□□□□ -0.33
THBS3-204ENST00000460050 FIGNL2A6NMB9 653 aa13.02□□□□□ -0.33
THBS3-204ENST00000460050 HPNP05981 417 aa13.02□□□□□ -0.33
THBS3-204ENST00000460050 AGAP20933 346 aa13.02□□□□□ -0.33
THBS3-204ENST00000460050 PRPS1L1P21108 318 aa13.02□□□□□ -0.33
THBS3-204ENST00000460050 PTPN6P29350 595 aa13.02□□□□□ -0.33
THBS3-204ENST00000460050 MRPS22P82650 360 aaKnown RBP13.02□□□□□ -0.33
THBS3-204ENST00000460050 MLC1Q15049 377 aa13.02□□□□□ -0.33
THBS3-204ENST00000460050 TOMM20Q15388 145 aa13.02□□□□□ -0.33
THBS3-204ENST00000460050 DECR1Q16698 335 aa13.02□□□□□ -0.33
THBS3-204ENST00000460050 WLSQ5T9L3 541 aa13.02□□□□□ -0.33
THBS3-204ENST00000460050 CPTPQ5TA50 214 aa13.02□□□□□ -0.33
THBS3-204ENST00000460050 AGBL2Q5U5Z8 902 aa13.02□□□□□ -0.33
THBS3-204ENST00000460050 ZNF585AQ6P3V2 769 aa13.02□□□□□ -0.33
THBS3-204ENST00000460050 RIMKLAQ8IXN7 391 aa13.02□□□□□ -0.33
THBS3-204ENST00000460050 RPRMLQ8N4K4 120 aa13.02□□□□□ -0.33
THBS3-204ENST00000460050 MARVELD2Q8N4S9 558 aa13.02□□□□□ -0.33
THBS3-204ENST00000460050 NUP43Q8NFH3 380 aa13.02□□□□□ -0.33
THBS3-204ENST00000460050 CEP70Q8NHQ1 597 aa13.02□□□□□ -0.33
THBS3-204ENST00000460050 RNF138Q8WVD3 245 aa13.02□□□□□ -0.33
THBS3-204ENST00000460050 ARL8AQ96BM9 186 aa13.02□□□□□ -0.33
THBS3-204ENST00000460050 MS4A4EQ96PG1 132 aa13.02□□□□□ -0.33
THBS3-204ENST00000460050 SERHLQ9NQF3 203 aa13.02□□□□□ -0.33
THBS3-204ENST00000460050 SIRT3Q9NTG7 399 aaPredicted RBP13.02□□□□□ -0.33
THBS3-204ENST00000460050 CBLCQ9ULV8 474 aa13.02□□□□□ -0.33
THBS3-204ENST00000460050 WIF1Q9Y5W5 379 aa13.02□□□□□ -0.33
THBS3-204ENST00000460050 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.01□□□□□ -0.33
THBS3-204ENST00000460050 C15orf38-AP3S2A0A0A6YYH1 394 aa13.01□□□□□ -0.33
THBS3-204ENST00000460050 GXYLT2A0PJZ3 443 aa13.01□□□□□ -0.33
THBS3-204ENST00000460050 TTC36A6NLP5 189 aa13.01□□□□□ -0.33
THBS3-204ENST00000460050 PRSS44E7EML9 344 aa13.01□□□□□ -0.33
THBS3-204ENST00000460050 EMC8O43402 210 aa13.01□□□□□ -0.33
THBS3-204ENST00000460050 SNNO75324 88 aaPredicted RBP13.01□□□□□ -0.33
THBS3-204ENST00000460050 ACVR2AP27037 513 aa13.01□□□□□ -0.33
THBS3-204ENST00000460050 GABRA3P34903 492 aa13.01□□□□□ -0.33
THBS3-204ENST00000460050 RFX3P48380 749 aa13.01□□□□□ -0.33
THBS3-204ENST00000460050 DIO3P55073 304 aa13.01□□□□□ -0.33
THBS3-204ENST00000460050 CLDN8P56748 225 aa13.01□□□□□ -0.33
THBS3-204ENST00000460050 C21orf58P58505 322 aa13.01□□□□□ -0.33
THBS3-204ENST00000460050 ATG16L1Q676U5 607 aa13.01□□□□□ -0.33
THBS3-204ENST00000460050 ZNF787Q6DD87 383 aa13.01□□□□□ -0.33
THBS3-204ENST00000460050 TMEM211Q6ICI0 200 aa13.01□□□□□ -0.33
THBS3-204ENST00000460050 CDRT4Q8N9R6 151 aa13.01□□□□□ -0.33
THBS3-204ENST00000460050 WDSUB1Q8N9V3 476 aa13.01□□□□□ -0.33
THBS3-204ENST00000460050 FBXO30Q8TB52 745 aa13.01□□□□□ -0.33
THBS3-204ENST00000460050 OR5P2Q8WZ92 322 aa13.01□□□□□ -0.33
THBS3-204ENST00000460050 HOXB13Q92826 284 aaPredicted RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms