RNA–Protein interactions for RNA: ENST00000459909.1

TMEM50B-205, Transcript of transmembrane protein 50B, humanhuman

TSL 2

Gene TMEM50B, Length 618 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-205ENST00000459909 LRTM1Q9HBL6 345 aa15.17■□□□□ 0.02
TMEM50B-205ENST00000459909 VTI1BQ9UEU0 232 aa15.17■□□□□ 0.02
TMEM50B-205ENST00000459909 SEC22BO75396 215 aa15.16■□□□□ 0.02
TMEM50B-205ENST00000459909 ERN1O75460 977 aaKnown RBP15.16■□□□□ 0.02
TMEM50B-205ENST00000459909 RSL1D1O76021 490 aaKnown RBP15.16■□□□□ 0.02
TMEM50B-205ENST00000459909 IFNA2P01563 188 aa15.16■□□□□ 0.02
TMEM50B-205ENST00000459909 JUNP05412 331 aaKnown RBP15.16■□□□□ 0.02
TMEM50B-205ENST00000459909 ACKR1Q16570 336 aa15.16■□□□□ 0.02
TMEM50B-205ENST00000459909 GALNTL6Q49A17 601 aa15.16■□□□□ 0.02
TMEM50B-205ENST00000459909 ATP6AP1LQ52LC2 224 aa15.16■□□□□ 0.02
TMEM50B-205ENST00000459909 CCNYL2Q5T2Q4 361 aa15.16■□□□□ 0.02
TMEM50B-205ENST00000459909 PRAMEF20Q5VT98 475 aa15.16■□□□□ 0.02
TMEM50B-205ENST00000459909 ZCCHC7Q8N3Z6 543 aaKnown RBP15.16■□□□□ 0.02
TMEM50B-205ENST00000459909 FAM47BQ8NA70 645 aa15.16■□□□□ 0.02
TMEM50B-205ENST00000459909 SLC2A12Q8TD20 617 aa15.16■□□□□ 0.02
TMEM50B-205ENST00000459909 C3orf30Q96M34 536 aa15.16■□□□□ 0.02
TMEM50B-205ENST00000459909 TRIB1Q96RU8 372 aa15.16■□□□□ 0.02
TMEM50B-205ENST00000459909 ZNF717Q9BY31 904 aaPredicted RBP15.16■□□□□ 0.02
TMEM50B-205ENST00000459909 DDX31Q9H8H2 851 aaKnown RBP15.16■□□□□ 0.02
TMEM50B-205ENST00000459909 C1orf109Q9NX04 203 aa15.16■□□□□ 0.02
TMEM50B-205ENST00000459909 GALNT8Q9NY28 637 aa15.16■□□□□ 0.02
TMEM50B-205ENST00000459909 CNIH4Q9P003 139 aa15.16■□□□□ 0.02
TMEM50B-205ENST00000459909 NDRG3Q9UGV2 375 aa15.16■□□□□ 0.02
TMEM50B-205ENST00000459909 ADAM29Q9UKF5 820 aa15.16■□□□□ 0.02
TMEM50B-205ENST00000459909 CCL27Q9Y4X3 112 aa15.16■□□□□ 0.02
TMEM50B-205ENST00000459909 NPFFR2Q9Y5X5 522 aa15.16■□□□□ 0.02
TMEM50B-205ENST00000459909 SPACA6W5XKT8 324 aa15.16■□□□□ 0.02
TMEM50B-205ENST00000459909 A0A0A6YYD5 115 aa15.15■□□□□ 0.02
TMEM50B-205ENST00000459909 GNG14A0A1W2PPG7 69 aa15.15■□□□□ 0.02
TMEM50B-205ENST00000459909 C17orf105B2RV13 164 aa15.15■□□□□ 0.02
TMEM50B-205ENST00000459909 POLR3GO15318 223 aaPredicted RBP15.15■□□□□ 0.02
TMEM50B-205ENST00000459909 HDAC3O15379 428 aa15.15■□□□□ 0.02
TMEM50B-205ENST00000459909 PCDH7O60245 1069 aa15.15■□□□□ 0.02
TMEM50B-205ENST00000459909 CTNSO60931 367 aa15.15■□□□□ 0.02
TMEM50B-205ENST00000459909 PEX11AO75192 247 aa15.15■□□□□ 0.02
TMEM50B-205ENST00000459909 SCELO95171 688 aa15.15■□□□□ 0.02
TMEM50B-205ENST00000459909 VIMP08670 466 aaKnown RBP15.15■□□□□ 0.02
TMEM50B-205ENST00000459909 FAM58BPP0C7Q3 252 aa15.15■□□□□ 0.02
TMEM50B-205ENST00000459909 TNNI3P19429 210 aa15.15■□□□□ 0.02
TMEM50B-205ENST00000459909 GDF1P27539 372 aa15.15■□□□□ 0.02
TMEM50B-205ENST00000459909 MAPK12P53778 367 aa15.15■□□□□ 0.02
TMEM50B-205ENST00000459909 LIM2P55344 173 aa15.15■□□□□ 0.02
TMEM50B-205ENST00000459909 XKR7Q5GH72 579 aa15.15■□□□□ 0.02
TMEM50B-205ENST00000459909 Q6ZSR9 355 aa15.15■□□□□ 0.02
TMEM50B-205ENST00000459909 WDR75Q8IWA0 830 aaKnown RBP15.15■□□□□ 0.02
TMEM50B-205ENST00000459909 DND1Q8IYX4 353 aaKnown RBP15.15■□□□□ 0.02
TMEM50B-205ENST00000459909 NUBPLQ8TB37 319 aa15.15■□□□□ 0.02
TMEM50B-205ENST00000459909 SLC22A8Q8TCC7 542 aa15.15■□□□□ 0.02
TMEM50B-205ENST00000459909 SPACA9Q96E40 222 aaPredicted RBP15.15■□□□□ 0.02
TMEM50B-205ENST00000459909 PPP3R2Q96LZ3 170 aa15.15■□□□□ 0.02
TMEM50B-205ENST00000459909 JSRP1Q96MG2 331 aaPredicted RBP15.15■□□□□ 0.02
TMEM50B-205ENST00000459909 MAPKAP1Q9BPZ7 522 aa15.15■□□□□ 0.02
TMEM50B-205ENST00000459909 EBPLQ9BY08 206 aa15.15■□□□□ 0.02
TMEM50B-205ENST00000459909 ALOXE3Q9BYJ1 711 aa15.15■□□□□ 0.02
TMEM50B-205ENST00000459909 GSX2Q9BZM3 304 aa15.15■□□□□ 0.02
TMEM50B-205ENST00000459909 CALHM2Q9HA72 323 aa15.15■□□□□ 0.02
TMEM50B-205ENST00000459909 PROK2Q9HC23 129 aa15.15■□□□□ 0.02
TMEM50B-205ENST00000459909 LYRM4Q9HD34 91 aa15.15■□□□□ 0.02
TMEM50B-205ENST00000459909 LYARQ9NX58 379 aaKnown RBP15.15■□□□□ 0.02
TMEM50B-205ENST00000459909 COPS7AQ9UBW8 275 aa15.15■□□□□ 0.02
TMEM50B-205ENST00000459909 GIMAP2Q9UG22 337 aa15.15■□□□□ 0.02
TMEM50B-205ENST00000459909 PHF11Q9UIL8 331 aa15.15■□□□□ 0.02
TMEM50B-205ENST00000459909 DAPP1Q9UN19 280 aa15.15■□□□□ 0.02
TMEM50B-205ENST00000459909 CAMK2AQ9UQM7 478 aa15.15■□□□□ 0.02
TMEM50B-205ENST00000459909 POLR3HQ9Y535 204 aaPredicted RBP15.15■□□□□ 0.02
TMEM50B-205ENST00000459909 ARID1AO14497 2285 aa15.14■□□□□ 0.01
TMEM50B-205ENST00000459909 TRPC5OSA6NMA1 111 aa15.14■□□□□ 0.01
TMEM50B-205ENST00000459909 CYR61O00622 381 aa15.14■□□□□ 0.01
TMEM50B-205ENST00000459909 LSM1O15116 133 aaKnown RBP15.14■□□□□ 0.01
TMEM50B-205ENST00000459909 TMPRSS11DO60235 418 aa15.14■□□□□ 0.01
TMEM50B-205ENST00000459909 EDF1O60869 148 aaKnown RBP15.14■□□□□ 0.01
TMEM50B-205ENST00000459909 CPN2P22792 545 aa15.14■□□□□ 0.01
TMEM50B-205ENST00000459909 PRPH2P23942 346 aa15.14■□□□□ 0.01
TMEM50B-205ENST00000459909 TIA1P31483 386 aaKnown RBP eCLIP15.14■□□□□ 0.01
TMEM50B-205ENST00000459909 CPA2P48052 419 aa15.14■□□□□ 0.01
TMEM50B-205ENST00000459909 GYS2P54840 703 aa15.14■□□□□ 0.01
TMEM50B-205ENST00000459909 RPL38P63173 70 aaKnown RBP15.14■□□□□ 0.01
TMEM50B-205ENST00000459909 STX4Q12846 297 aa15.14■□□□□ 0.01
TMEM50B-205ENST00000459909 VASNQ6EMK4 673 aa15.14■□□□□ 0.01
TMEM50B-205ENST00000459909 C20orf204Q6ZNR8 217 aa15.14■□□□□ 0.01
TMEM50B-205ENST00000459909 GPR180Q86V85 440 aa15.14■□□□□ 0.01
TMEM50B-205ENST00000459909 SLC15A4Q8N697 577 aa15.14■□□□□ 0.01
TMEM50B-205ENST00000459909 CDC26Q8NHZ8 85 aa15.14■□□□□ 0.01
TMEM50B-205ENST00000459909 MCM8Q9UJA3 840 aa15.14■□□□□ 0.01
TMEM50B-205ENST00000459909 TESMINQ9Y4I5 508 aa15.14■□□□□ 0.01
TMEM50B-205ENST00000459909 USH1CQ9Y6N9 552 aa15.14■□□□□ 0.01
TMEM50B-205ENST00000459909 MYOCOSA0A1B0GUC4 107 aa15.13■□□□□ 0.01
TMEM50B-205ENST00000459909 GUCY1B2O75343 617 aa15.13■□□□□ 0.01
TMEM50B-205ENST00000459909 F12P00748 615 aaPredicted RBP15.13■□□□□ 0.01
TMEM50B-205ENST00000459909 ANXA4P09525 319 aaPredicted RBP15.13■□□□□ 0.01
TMEM50B-205ENST00000459909 TMIGD3P0DMS9 266 aaPredicted RBP15.13■□□□□ 0.01
TMEM50B-205ENST00000459909 TLX1P31314 330 aaPredicted RBP15.13■□□□□ 0.01
TMEM50B-205ENST00000459909 BUD31P41223 144 aaPredicted RBP15.13■□□□□ 0.01
TMEM50B-205ENST00000459909 HNRNPH2P55795 449 aaKnown RBP15.13■□□□□ 0.01
TMEM50B-205ENST00000459909 RAE1P78406 368 aaKnown RBP15.13■□□□□ 0.01
TMEM50B-205ENST00000459909 SERTAD2Q14140 314 aa15.13■□□□□ 0.01
TMEM50B-205ENST00000459909 NHSL2Q5HYW2 709 aa15.13■□□□□ 0.01
TMEM50B-205ENST00000459909 LYPD8Q6UX82 237 aa15.13■□□□□ 0.01
TMEM50B-205ENST00000459909 LUZP2Q86TE4 346 aa15.13■□□□□ 0.01
TMEM50B-205ENST00000459909 FNDC5Q8NAU1 212 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms