RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 PGM1P36871 562 aa9.64□□□□□ -0.87
USP39-210ENST00000459775 ARSFP54793 590 aa9.64□□□□□ -0.87
USP39-210ENST00000459775 ABHD18Q0P651 414 aa9.64□□□□□ -0.87
USP39-210ENST00000459775 IL11RAQ14626 422 aa9.64□□□□□ -0.87
USP39-210ENST00000459775 COX20Q5RI15 118 aa9.64□□□□□ -0.87
USP39-210ENST00000459775 OR52E8Q6IFG1 317 aa9.64□□□□□ -0.87
USP39-210ENST00000459775 PAPD4Q6PIY7 484 aaKnown RBP9.64□□□□□ -0.87
USP39-210ENST00000459775 FAM111BQ6SJ93 734 aa9.64□□□□□ -0.87
USP39-210ENST00000459775 TMEM107Q6UX40 140 aa9.64□□□□□ -0.87
USP39-210ENST00000459775 TIPARPQ7Z3E1 657 aaKnown RBP9.64□□□□□ -0.87
USP39-210ENST00000459775 SZRD1Q7Z422 152 aa9.64□□□□□ -0.87
USP39-210ENST00000459775 OR8H3Q8N146 312 aa9.64□□□□□ -0.87
USP39-210ENST00000459775 TSPEARQ8WU66 669 aa9.64□□□□□ -0.87
USP39-210ENST00000459775 MTERF3Q96E29 417 aa9.64□□□□□ -0.87
USP39-210ENST00000459775 CCDC115Q96NT0 180 aa9.64□□□□□ -0.87
USP39-210ENST00000459775 SOX17Q9H6I2 414 aaPredicted RBP9.64□□□□□ -0.87
USP39-210ENST00000459775 FBXO8Q9NRD0 319 aa9.64□□□□□ -0.87
USP39-210ENST00000459775 SIRT3Q9NTG7 399 aaPredicted RBP9.64□□□□□ -0.87
USP39-210ENST00000459775 FAM120CQ9NX05 1096 aaKnown RBP9.64□□□□□ -0.87
USP39-210ENST00000459775 NOX1Q9Y5S8 564 aa9.64□□□□□ -0.87
USP39-210ENST00000459775 FER1L5A0AVI2 2057 aa9.64□□□□□ -0.87
USP39-210ENST00000459775 NUP214P35658 2090 aaPredicted RBP9.64□□□□□ -0.87
USP39-210ENST00000459775 TRBV5-3A0A0A0MS03 114 aa9.64□□□□□ -0.87
USP39-210ENST00000459775 PRORSD1PA6NEY8 169 aa9.64□□□□□ -0.87
USP39-210ENST00000459775 A8MUA0 341 aa9.64□□□□□ -0.87
USP39-210ENST00000459775 MYO1GB0I1T2 1018 aa9.64□□□□□ -0.87
USP39-210ENST00000459775 RNASET2O00584 256 aaKnown RBP9.64□□□□□ -0.87
USP39-210ENST00000459775 PLD2O14939 933 aa9.64□□□□□ -0.87
USP39-210ENST00000459775 PRKNO60260 465 aaPredicted RBP9.64□□□□□ -0.87
USP39-210ENST00000459775 IFNA14P01570 189 aa9.64□□□□□ -0.87
USP39-210ENST00000459775 NUDT7P0C024 238 aa9.64□□□□□ -0.87
USP39-210ENST00000459775 CT62P0C5K7 136 aa9.64□□□□□ -0.87
USP39-210ENST00000459775 RORAP35398 523 aa9.64□□□□□ -0.87
USP39-210ENST00000459775 PRKAG1P54619 331 aa9.64□□□□□ -0.87
USP39-210ENST00000459775 EMP3P54852 163 aa9.64□□□□□ -0.87
USP39-210ENST00000459775 DPY19L1Q2PZI1 675 aa9.64□□□□□ -0.87
USP39-210ENST00000459775 TRMT12Q53H54 448 aaKnown RBP9.64□□□□□ -0.87
USP39-210ENST00000459775 C19orf48Q6RUI8 117 aa9.64□□□□□ -0.87
USP39-210ENST00000459775 CLVS1Q8IUQ0 354 aaPredicted RBP9.64□□□□□ -0.87
USP39-210ENST00000459775 ZC3H7AQ8IWR0 971 aaKnown RBP9.64□□□□□ -0.87
USP39-210ENST00000459775 PGAM4Q8N0Y7 254 aa9.64□□□□□ -0.87
USP39-210ENST00000459775 PIK3C3Q8NEB9 887 aa9.64□□□□□ -0.87
USP39-210ENST00000459775 ZNF680Q8NEM1 530 aa9.64□□□□□ -0.87
USP39-210ENST00000459775 OR4K14Q8NGD5 310 aa9.64□□□□□ -0.87
USP39-210ENST00000459775 TMEM125Q96AQ2 219 aa9.64□□□□□ -0.87
USP39-210ENST00000459775 ANKRD27Q96NW4 1050 aa9.64□□□□□ -0.87
USP39-210ENST00000459775 DPH2Q9BQC3 489 aaPredicted RBP9.64□□□□□ -0.87
USP39-210ENST00000459775 THUMPD3Q9BV44 507 aaKnown RBP9.64□□□□□ -0.87
USP39-210ENST00000459775 NPLQ9BXD5 320 aaPredicted RBP9.64□□□□□ -0.87
USP39-210ENST00000459775 PCDHAC1Q9H158 963 aa9.64□□□□□ -0.87
USP39-210ENST00000459775 CHST8Q9H2A9 424 aa9.64□□□□□ -0.87
USP39-210ENST00000459775 RMND5AQ9H871 391 aa9.64□□□□□ -0.87
USP39-210ENST00000459775 PRTFDC1Q9NRG1 225 aa9.64□□□□□ -0.87
USP39-210ENST00000459775 SERINC1Q9NRX5 453 aa9.64□□□□□ -0.87
USP39-210ENST00000459775 GPATCH2Q9NW75 528 aa9.64□□□□□ -0.87
USP39-210ENST00000459775 MS4A12Q9NXJ0 267 aa9.64□□□□□ -0.87
USP39-210ENST00000459775 TAS2R9Q9NYW1 312 aa9.64□□□□□ -0.87
USP39-210ENST00000459775 MAN2B2Q9Y2E5 1009 aa9.64□□□□□ -0.87
USP39-210ENST00000459775 MAP4K5Q9Y4K4 846 aa9.64□□□□□ -0.87
USP39-210ENST00000459775 CROCCQ5TZA2 2017 aa9.63□□□□□ -0.87
USP39-210ENST00000459775 A0A096LPI6 279 aa9.63□□□□□ -0.87
USP39-210ENST00000459775 IGHV3-20A0A0C4DH32 117 aa9.63□□□□□ -0.87
USP39-210ENST00000459775 SNPHO15079 494 aa9.63□□□□□ -0.87
USP39-210ENST00000459775 DNAJA2O60884 412 aa9.63□□□□□ -0.87
USP39-210ENST00000459775 GPR75O95800 540 aa9.63□□□□□ -0.87
USP39-210ENST00000459775 CPMP14384 443 aa9.63□□□□□ -0.87
USP39-210ENST00000459775 ANPEPP15144 967 aa9.63□□□□□ -0.87
USP39-210ENST00000459775 TRHRP34981 398 aaPredicted RBP9.63□□□□□ -0.87
USP39-210ENST00000459775 GPC1P35052 558 aa9.63□□□□□ -0.87
USP39-210ENST00000459775 MC3RP41968 323 aa9.63□□□□□ -0.87
USP39-210ENST00000459775 EEF1A1P68104 462 aaKnown RBP9.63□□□□□ -0.87
USP39-210ENST00000459775 EEF1A2Q05639 463 aaKnown RBP9.63□□□□□ -0.87
USP39-210ENST00000459775 BLMHQ13867 455 aa9.63□□□□□ -0.87
USP39-210ENST00000459775 RUNDC3AQ59EK9 446 aa9.63□□□□□ -0.87
USP39-210ENST00000459775 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.63□□□□□ -0.87
USP39-210ENST00000459775 LRIF1Q5T3J3 769 aa9.63□□□□□ -0.87
USP39-210ENST00000459775 DCAF12Q5T6F0 453 aa9.63□□□□□ -0.87
USP39-210ENST00000459775 EEF1A1P5Q5VTE0 462 aa9.63□□□□□ -0.87
USP39-210ENST00000459775 OR10Z1Q8NGY1 313 aa9.63□□□□□ -0.87
USP39-210ENST00000459775 STT3BQ8TCJ2 826 aa9.63□□□□□ -0.87
USP39-210ENST00000459775 MR1Q95460 341 aa9.63□□□□□ -0.87
USP39-210ENST00000459775 MCUR1Q96AQ8 359 aa9.63□□□□□ -0.87
USP39-210ENST00000459775 PTCHD1Q96NR3 888 aa9.63□□□□□ -0.87
USP39-210ENST00000459775 TXN2Q99757 166 aa9.63□□□□□ -0.87
USP39-210ENST00000459775 ALOXE3Q9BYJ1 711 aa9.63□□□□□ -0.87
USP39-210ENST00000459775 C1orf21Q9H246 121 aa9.63□□□□□ -0.87
USP39-210ENST00000459775 GHITMQ9H3K2 345 aa9.63□□□□□ -0.87
USP39-210ENST00000459775 TMEM45AQ9NWC5 275 aa9.63□□□□□ -0.87
USP39-210ENST00000459775 MRPL39Q9NYK5 338 aaKnown RBP9.63□□□□□ -0.87
USP39-210ENST00000459775 CD300AQ9UGN4 299 aa9.63□□□□□ -0.87
USP39-210ENST00000459775 BTNL2Q9UIR0 455 aa9.63□□□□□ -0.87
USP39-210ENST00000459775 SRPK3Q9UPE1 567 aa9.63□□□□□ -0.87
USP39-210ENST00000459775 ENTPD4Q9Y227 616 aa9.63□□□□□ -0.87
USP39-210ENST00000459775 RPH3AQ9Y2J0 694 aaPredicted RBP9.63□□□□□ -0.87
USP39-210ENST00000459775 WBP11Q9Y2W2 641 aaKnown RBP9.63□□□□□ -0.87
USP39-210ENST00000459775 ZNF780BQ9Y6R6 833 aa9.63□□□□□ -0.87
USP39-210ENST00000459775 SPACA6W5XKT8 324 aa9.63□□□□□ -0.87
USP39-210ENST00000459775 FRYQ5TBA9 3013 aa9.63□□□□□ -0.87
USP39-210ENST00000459775 CPNE3O75131 537 aaKnown RBP9.62□□□□□ -0.87
USP39-210ENST00000459775 STK17BO94768 372 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms