RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 CDCP2Q5VXM1 449 aa22.69■■□□□ 1.22
U2AF1-204ENST00000459639 TBPL2Q6SJ96 375 aa22.69■■□□□ 1.22
U2AF1-204ENST00000459639 TMEM179BQ7Z7N9 219 aa22.69■■□□□ 1.22
U2AF1-204ENST00000459639 ZNF619Q8N2I2 560 aa22.69■■□□□ 1.22
U2AF1-204ENST00000459639 C16orf52Q8NHV5 167 aa22.69■■□□□ 1.22
U2AF1-204ENST00000459639 NRBF2Q96F24 287 aa22.69■■□□□ 1.22
U2AF1-204ENST00000459639 Q9H521 79 aa22.69■■□□□ 1.22
U2AF1-204ENST00000459639 CACYBPQ9HB71 228 aaKnown RBP22.69■■□□□ 1.22
U2AF1-204ENST00000459639 SLC39A1Q9NY26 324 aa22.69■■□□□ 1.22
U2AF1-204ENST00000459639 IFT52Q9Y366 437 aa22.69■■□□□ 1.22
U2AF1-204ENST00000459639 NINQ8N4C6 2090 aa22.69■■□□□ 1.22
U2AF1-204ENST00000459639 KIF26BQ2KJY2 2108 aa22.69■■□□□ 1.22
U2AF1-204ENST00000459639 GUSBP08236 651 aa22.68■■□□□ 1.22
U2AF1-204ENST00000459639 PRKAR1BP31321 381 aa22.68■■□□□ 1.22
U2AF1-204ENST00000459639 ALDH3A2P51648 485 aa22.68■■□□□ 1.22
U2AF1-204ENST00000459639 ARHGDIAP52565 204 aa22.68■■□□□ 1.22
U2AF1-204ENST00000459639 CCDC157Q569K6 752 aa22.68■■□□□ 1.22
U2AF1-204ENST00000459639 ZNF311Q5JNZ3 666 aa22.68■■□□□ 1.22
U2AF1-204ENST00000459639 OTUD3Q5T2D3 398 aaPredicted RBP22.68■■□□□ 1.22
U2AF1-204ENST00000459639 CCNJQ5T5M9 372 aa22.68■■□□□ 1.22
U2AF1-204ENST00000459639 AP1ARQ63HQ0 302 aa22.68■■□□□ 1.22
U2AF1-204ENST00000459639 DHRS4L2Q6PKH6 230 aa22.68■■□□□ 1.22
U2AF1-204ENST00000459639 CARM1Q86X55 608 aa22.68■■□□□ 1.22
U2AF1-204ENST00000459639 PEX5LQ8IYB4 626 aa22.68■■□□□ 1.22
U2AF1-204ENST00000459639 DAZLQ92904 295 aaKnown RBP22.68■■□□□ 1.22
U2AF1-204ENST00000459639 EPYCQ99645 322 aa22.68■■□□□ 1.22
U2AF1-204ENST00000459639 OSBPL11Q9BXB4 747 aa22.68■■□□□ 1.22
U2AF1-204ENST00000459639 QRSL1Q9H0R6 528 aaKnown RBP22.68■■□□□ 1.22
U2AF1-204ENST00000459639 GABARAPL1Q9H0R8 117 aa22.68■■□□□ 1.22
U2AF1-204ENST00000459639 IRF2BPLQ9H1B7 796 aa22.68■■□□□ 1.22
U2AF1-204ENST00000459639 MKLN1Q9UL63 735 aa22.68■■□□□ 1.22
U2AF1-204ENST00000459639 DTX4Q9Y2E6 619 aa22.68■■□□□ 1.22
U2AF1-204ENST00000459639 SLC9A8Q9Y2E8 581 aa22.68■■□□□ 1.22
U2AF1-204ENST00000459639 SAMHD1Q9Y3Z3 626 aaKnown RBP22.68■■□□□ 1.22
U2AF1-204ENST00000459639 FAM32AQ9Y421 112 aaKnown RBP22.68■■□□□ 1.22
U2AF1-204ENST00000459639 U3KQV3 271 aa22.68■■□□□ 1.22
U2AF1-204ENST00000459639 DMDP11532 3685 aa22.68■■□□□ 1.22
U2AF1-204ENST00000459639 GXYLT2A0PJZ3 443 aa22.68■■□□□ 1.22
U2AF1-204ENST00000459639 KIAA0513O60268 411 aa22.68■■□□□ 1.22
U2AF1-204ENST00000459639 DDAH2O95865 285 aa22.68■■□□□ 1.22
U2AF1-204ENST00000459639 LGI1O95970 557 aa22.68■■□□□ 1.22
U2AF1-204ENST00000459639 CYC1P08574 325 aa22.68■■□□□ 1.22
U2AF1-204ENST00000459639 RHCEP18577 417 aa22.68■■□□□ 1.22
U2AF1-204ENST00000459639 RRM2P31350 389 aa22.68■■□□□ 1.22
U2AF1-204ENST00000459639 TRHRP34981 398 aaPredicted RBP22.68■■□□□ 1.22
U2AF1-204ENST00000459639 NBL1P41271 181 aa22.68■■□□□ 1.22
U2AF1-204ENST00000459639 OR52P1PQ8NH57 321 aa22.68■■□□□ 1.22
U2AF1-204ENST00000459639 SLC2A12Q8TD20 617 aa22.68■■□□□ 1.22
U2AF1-204ENST00000459639 PIP5K1AQ99755 562 aa22.68■■□□□ 1.22
U2AF1-204ENST00000459639 OSBPL10Q9BXB5 764 aa22.68■■□□□ 1.22
U2AF1-204ENST00000459639 Q9N2J8 555 aa22.68■■□□□ 1.22
U2AF1-204ENST00000459639 USE1Q9NZ43 259 aa22.68■■□□□ 1.22
U2AF1-204ENST00000459639 CFL2Q9Y281 166 aa22.68■■□□□ 1.22
U2AF1-204ENST00000459639 LOXL2Q9Y4K0 774 aa22.68■■□□□ 1.22
U2AF1-204ENST00000459639 AP4B1Q9Y6B7 739 aa22.68■■□□□ 1.22
U2AF1-204ENST00000459639 OTOGLQ3ZCN5 2332 aa22.67■■□□□ 1.22
U2AF1-204ENST00000459639 A8MUA0 341 aa22.67■■□□□ 1.22
U2AF1-204ENST00000459639 FOXD2O60548 495 aaPredicted RBP22.67■■□□□ 1.22
U2AF1-204ENST00000459639 IGKV3-11P04433 115 aa22.67■■□□□ 1.22
U2AF1-204ENST00000459639 ZNF28P17035 718 aa22.67■■□□□ 1.22
U2AF1-204ENST00000459639 TGM1P22735 817 aa22.67■■□□□ 1.22
U2AF1-204ENST00000459639 SLC37A1P57057 533 aa22.67■■□□□ 1.22
U2AF1-204ENST00000459639 RAB15P59190 212 aa22.67■■□□□ 1.22
U2AF1-204ENST00000459639 PPP1R8Q12972 351 aaKnown RBP22.67■■□□□ 1.22
U2AF1-204ENST00000459639 NPSR1Q6W5P4 371 aa22.67■■□□□ 1.22
U2AF1-204ENST00000459639 MAGEE2Q8TD90 523 aaPredicted RBP22.67■■□□□ 1.22
U2AF1-204ENST00000459639 RMND5BQ96G75 393 aaPredicted RBP22.67■■□□□ 1.22
U2AF1-204ENST00000459639 SLC46A1Q96NT5 459 aa22.67■■□□□ 1.22
U2AF1-204ENST00000459639 RBM4BQ9BQ04 359 aaKnown RBP22.67■■□□□ 1.22
U2AF1-204ENST00000459639 RBM4Q9BWF3 364 aaKnown RBP22.67■■□□□ 1.22
U2AF1-204ENST00000459639 MAGED1Q9Y5V3 778 aaPredicted RBP22.67■■□□□ 1.22
U2AF1-204ENST00000459639 MYO15AQ9UKN7 3530 aa22.67■■□□□ 1.22
U2AF1-204ENST00000459639 AGAP5A6NIR3 686 aa22.66■■□□□ 1.22
U2AF1-204ENST00000459639 IDSB3KWA1 339 aa22.66■■□□□ 1.22
U2AF1-204ENST00000459639 DENRO43583 198 aaKnown RBP22.66■■□□□ 1.22
U2AF1-204ENST00000459639 BRINP1O60477 761 aa22.66■■□□□ 1.22
U2AF1-204ENST00000459639 KCNK2O95069 426 aa22.66■■□□□ 1.22
U2AF1-204ENST00000459639 EPPINO95925 133 aa22.66■■□□□ 1.22
U2AF1-204ENST00000459639 ALPLP05186 524 aa22.66■■□□□ 1.22
U2AF1-204ENST00000459639 HEXBP07686 556 aa22.66■■□□□ 1.22
U2AF1-204ENST00000459639 THBS1P07996 1170 aa22.66■■□□□ 1.22
U2AF1-204ENST00000459639 RPS4Y1P22090 263 aaKnown RBP22.66■■□□□ 1.22
U2AF1-204ENST00000459639 PPP2R2BQ00005 443 aa22.66■■□□□ 1.22
U2AF1-204ENST00000459639 GK3PQ14409 553 aa22.66■■□□□ 1.22
U2AF1-204ENST00000459639 ISXQ2M1V0 245 aa22.66■■□□□ 1.22
U2AF1-204ENST00000459639 SHISA6Q6ZSJ9 500 aa22.66■■□□□ 1.22
U2AF1-204ENST00000459639 HMGN2P46Q86SG4 172 aa22.66■■□□□ 1.22
U2AF1-204ENST00000459639 PIP4P1Q86T03 277 aa22.66■■□□□ 1.22
U2AF1-204ENST00000459639 ZNF605Q86T29 641 aa22.66■■□□□ 1.22
U2AF1-204ENST00000459639 COMTD1Q86VU5 262 aa22.66■■□□□ 1.22
U2AF1-204ENST00000459639 VRK2Q86Y07 508 aa22.66■■□□□ 1.22
U2AF1-204ENST00000459639 ZNF721Q8TF20 911 aa22.66■■□□□ 1.22
U2AF1-204ENST00000459639 ZG16BQ96DA0 208 aa22.66■■□□□ 1.22
U2AF1-204ENST00000459639 LIN37Q96GY3 246 aaPredicted RBP22.66■■□□□ 1.22
U2AF1-204ENST00000459639 ITPAQ9BY32 194 aa22.66■■□□□ 1.22
U2AF1-204ENST00000459639 OR8D2Q9GZM6 311 aa22.66■■□□□ 1.22
U2AF1-204ENST00000459639 SMPD3Q9NY59 655 aaPredicted RBP22.66■■□□□ 1.22
U2AF1-204ENST00000459639 ZNF443Q9Y2A4 671 aaPredicted RBP22.66■■□□□ 1.22
U2AF1-204ENST00000459639 TESMINQ9Y4I5 508 aa22.66■■□□□ 1.22
U2AF1-204ENST00000459639 DLGAP1O14490 977 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms