RNA–Protein interactions for RNA: ENST00000458564.5

HDLBP-227, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-227ENST00000458564 C16orf97H3BN30 126 aa9.41□□□□□ -0.9
HDLBP-227ENST00000458564 LINC01387J3KSC0 135 aa9.41□□□□□ -0.9
HDLBP-227ENST00000458564 EMC8O43402 210 aa9.41□□□□□ -0.9
HDLBP-227ENST00000458564 TMCC2O75069 709 aa9.41□□□□□ -0.9
HDLBP-227ENST00000458564 TNFRSF21O75509 655 aa9.41□□□□□ -0.9
HDLBP-227ENST00000458564 REM1O75628 298 aa9.41□□□□□ -0.9
HDLBP-227ENST00000458564 OTCP00480 354 aa9.41□□□□□ -0.9
HDLBP-227ENST00000458564 RBP1P09455 135 aa9.41□□□□□ -0.9
HDLBP-227ENST00000458564 POU2F1P14859 743 aa9.41□□□□□ -0.9
HDLBP-227ENST00000458564 PCSK6P29122 969 aa9.41□□□□□ -0.9
HDLBP-227ENST00000458564 TYK2P29597 1187 aa9.41□□□□□ -0.9
HDLBP-227ENST00000458564 PNLIPRP2P54317 469 aa9.41□□□□□ -0.9
HDLBP-227ENST00000458564 CLDN15P56746 228 aa9.41□□□□□ -0.9
HDLBP-227ENST00000458564 CORO7P57737 925 aa9.41□□□□□ -0.9
HDLBP-227ENST00000458564 MRPS22P82650 360 aaKnown RBP9.41□□□□□ -0.9
HDLBP-227ENST00000458564 GANABQ14697 944 aaKnown RBP9.41□□□□□ -0.9
HDLBP-227ENST00000458564 LETMD1Q6P1Q0 360 aa9.41□□□□□ -0.9
HDLBP-227ENST00000458564 NPSR1Q6W5P4 371 aa9.41□□□□□ -0.9
HDLBP-227ENST00000458564 P4HA3Q7Z4N8 544 aa9.41□□□□□ -0.9
HDLBP-227ENST00000458564 MILR1Q7Z6M3 343 aa9.41□□□□□ -0.9
HDLBP-227ENST00000458564 CCDC25Q86WR0 208 aa9.41□□□□□ -0.9
HDLBP-227ENST00000458564 SAMD14Q8IZD0 417 aaPredicted RBP9.41□□□□□ -0.9
HDLBP-227ENST00000458564 PLD6Q8N2A8 252 aaKnown RBP9.41□□□□□ -0.9
HDLBP-227ENST00000458564 CNEP1R1Q8N9A8 125 aa9.41□□□□□ -0.9
HDLBP-227ENST00000458564 OR4F6Q8NGB9 312 aa9.41□□□□□ -0.9
HDLBP-227ENST00000458564 SPATA3Q8NHX4 192 aa9.41□□□□□ -0.9
HDLBP-227ENST00000458564 PHF21BQ96EK2 531 aa9.41□□□□□ -0.9
HDLBP-227ENST00000458564 PERPQ96FX8 193 aa9.41□□□□□ -0.9
HDLBP-227ENST00000458564 PGM2Q96G03 612 aa9.41□□□□□ -0.9
HDLBP-227ENST00000458564 FAM111AQ96PZ2 611 aa9.41□□□□□ -0.9
HDLBP-227ENST00000458564 HS3ST6Q96QI5 342 aa9.41□□□□□ -0.9
HDLBP-227ENST00000458564 C1QTNF3Q9BXJ4 246 aa9.41□□□□□ -0.9
HDLBP-227ENST00000458564 SHCBP1LQ9BZQ2 653 aa9.41□□□□□ -0.9
HDLBP-227ENST00000458564 RAB17Q9H0T7 212 aa9.41□□□□□ -0.9
HDLBP-227ENST00000458564 UBTD1Q9HAC8 227 aa9.41□□□□□ -0.9
HDLBP-227ENST00000458564 FARSBQ9NSD9 589 aaKnown RBP9.41□□□□□ -0.9
HDLBP-227ENST00000458564 NMRK1Q9NWW6 199 aa9.41□□□□□ -0.9
HDLBP-227ENST00000458564 XPR1Q9UBH6 696 aa9.41□□□□□ -0.9
HDLBP-227ENST00000458564 UTS2RQ9UKP6 389 aa9.41□□□□□ -0.9
HDLBP-227ENST00000458564 INAFM1C9JVW0 142 aa9.4□□□□□ -0.9
HDLBP-227ENST00000458564 PLOD3O60568 738 aa9.4□□□□□ -0.9
HDLBP-227ENST00000458564 PDYNP01213 254 aa9.4□□□□□ -0.9
HDLBP-227ENST00000458564 HSD3B1P14060 373 aa9.4□□□□□ -0.9
HDLBP-227ENST00000458564 HSD3B2P26439 372 aa9.4□□□□□ -0.9
HDLBP-227ENST00000458564 IL12BP29460 328 aa9.4□□□□□ -0.9
HDLBP-227ENST00000458564 EVI2BP34910 448 aa9.4□□□□□ -0.9
HDLBP-227ENST00000458564 KRT20P35900 424 aa9.4□□□□□ -0.9
HDLBP-227ENST00000458564 PTH2RP49190 550 aa9.4□□□□□ -0.9
HDLBP-227ENST00000458564 EEFSECP57772 596 aaKnown RBP9.4□□□□□ -0.9
HDLBP-227ENST00000458564 PPP2R2BQ00005 443 aa9.4□□□□□ -0.9
HDLBP-227ENST00000458564 ERCC6LQ2NKX8 1250 aa9.4□□□□□ -0.9
HDLBP-227ENST00000458564 TSNAXIP1Q2TAA8 658 aa9.4□□□□□ -0.9
HDLBP-227ENST00000458564 SGO1Q5FBB7 561 aa9.4□□□□□ -0.9
HDLBP-227ENST00000458564 OR5M10Q6IEU7 315 aa9.4□□□□□ -0.9
HDLBP-227ENST00000458564 FAM180BQ6P0A1 224 aa9.4□□□□□ -0.9
HDLBP-227ENST00000458564 LARP4Q71RC2 724 aaKnown RBP eCLIP9.4□□□□□ -0.9
HDLBP-227ENST00000458564 CHMP1BQ7LBR1 199 aa9.4□□□□□ -0.9
HDLBP-227ENST00000458564 CXXC5Q7LFL8 322 aaKnown RBP9.4□□□□□ -0.9
HDLBP-227ENST00000458564 MEIOBQ8N635 442 aa9.4□□□□□ -0.9
HDLBP-227ENST00000458564 C1orf52Q8N6N3 182 aaKnown RBP9.4□□□□□ -0.9
HDLBP-227ENST00000458564 OR2M3Q8NG83 312 aa9.4□□□□□ -0.9
HDLBP-227ENST00000458564 OR4K17Q8NGC6 315 aa9.4□□□□□ -0.9
HDLBP-227ENST00000458564 ZNF483Q8TF39 744 aaPredicted RBP9.4□□□□□ -0.9
HDLBP-227ENST00000458564 SELENOMQ8WWX9 145 aa9.4□□□□□ -0.9
HDLBP-227ENST00000458564 FIG4Q92562 907 aa9.4□□□□□ -0.9
HDLBP-227ENST00000458564 ZNF845Q96IR2 970 aaPredicted RBP9.4□□□□□ -0.9
HDLBP-227ENST00000458564 STMN4Q9H169 189 aaPredicted RBP9.4□□□□□ -0.9
HDLBP-227ENST00000458564 OPN3Q9H1Y3 402 aaPredicted RBP9.4□□□□□ -0.9
HDLBP-227ENST00000458564 VPS11Q9H270 941 aa9.4□□□□□ -0.9
HDLBP-227ENST00000458564 ZNF701Q9NV72 531 aaPredicted RBP9.4□□□□□ -0.9
HDLBP-227ENST00000458564 VPS29Q9UBQ0 182 aa9.4□□□□□ -0.9
HDLBP-227ENST00000458564 MCM8Q9UJA3 840 aa9.4□□□□□ -0.9
HDLBP-227ENST00000458564 SNX6Q9UNH7 406 aa9.4□□□□□ -0.9
HDLBP-227ENST00000458564 ABCG2Q9UNQ0 655 aa9.4□□□□□ -0.9
HDLBP-227ENST00000458564 SONP18583 2426 aaKnown RBP9.4□□□□□ -0.91
HDLBP-227ENST00000458564 DSCAMO60469 2012 aa9.39□□□□□ -0.91
HDLBP-227ENST00000458564 SMAD7O15105 426 aaKnown RBP9.39□□□□□ -0.91
HDLBP-227ENST00000458564 SMIM24O75264 130 aa9.39□□□□□ -0.91
HDLBP-227ENST00000458564 CNOT4O95628 575 aaKnown RBP9.39□□□□□ -0.91
HDLBP-227ENST00000458564 CTAGE8P0CG41 777 aa9.39□□□□□ -0.91
HDLBP-227ENST00000458564 COL6A2P12110 1019 aa9.39□□□□□ -0.91
HDLBP-227ENST00000458564 FCGR2AP12318 317 aa9.39□□□□□ -0.91
HDLBP-227ENST00000458564 PPP3CBP16298 524 aa9.39□□□□□ -0.91
HDLBP-227ENST00000458564 ALDH9A1P49189 494 aa9.39□□□□□ -0.91
HDLBP-227ENST00000458564 PSG6Q00889 435 aa9.39□□□□□ -0.91
HDLBP-227ENST00000458564 C2orf54Q08AI8 447 aa9.39□□□□□ -0.91
HDLBP-227ENST00000458564 TRADDQ15628 312 aa9.39□□□□□ -0.91
HDLBP-227ENST00000458564 RAET1LQ5VY80 246 aa9.39□□□□□ -0.91
HDLBP-227ENST00000458564 C22orf34Q6ZV56 151 aa9.39□□□□□ -0.91
HDLBP-227ENST00000458564 PLEKHM3Q6ZWE6 761 aa9.39□□□□□ -0.91
HDLBP-227ENST00000458564 FAM214BQ7L5A3 538 aa9.39□□□□□ -0.91
HDLBP-227ENST00000458564 ZNF550Q7Z398 422 aa9.39□□□□□ -0.91
HDLBP-227ENST00000458564 CTAGE4Q8IX94 777 aa9.39□□□□□ -0.91
HDLBP-227ENST00000458564 UBQLNLQ8IYU4 475 aa9.39□□□□□ -0.91
HDLBP-227ENST00000458564 CCDC116Q8IYX3 515 aa9.39□□□□□ -0.91
HDLBP-227ENST00000458564 METTL25Q8N6Q8 603 aa9.39□□□□□ -0.91
HDLBP-227ENST00000458564 OR9A2Q8NGT5 310 aa9.39□□□□□ -0.91
HDLBP-227ENST00000458564 FNDC9Q8TBE3 224 aa9.39□□□□□ -0.91
HDLBP-227ENST00000458564 EFHD2Q96C19 240 aaPredicted RBP9.39□□□□□ -0.91
HDLBP-227ENST00000458564 PIGQQ9BRB3 760 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms