RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 IFNW1P05000 195 aa8.34□□□□□ -1.07
VPS50-207ENST00000458530 IFNA16P05015 189 aa8.34□□□□□ -1.07
VPS50-207ENST00000458530 CASP9P55211 416 aa8.34□□□□□ -1.07
VPS50-207ENST00000458530 CLDN6P56747 220 aa8.34□□□□□ -1.07
VPS50-207ENST00000458530 E2F1Q01094 437 aa8.34□□□□□ -1.07
VPS50-207ENST00000458530 ID2Q02363 134 aa8.34□□□□□ -1.07
VPS50-207ENST00000458530 OCA2Q04671 838 aa8.34□□□□□ -1.07
VPS50-207ENST00000458530 DUSP2Q05923 314 aa8.34□□□□□ -1.07
VPS50-207ENST00000458530 ZNF155Q12901 538 aaPredicted RBP8.34□□□□□ -1.07
VPS50-207ENST00000458530 TARDBPQ13148 414 aaKnown RBP eCLIP8.34□□□□□ -1.07
VPS50-207ENST00000458530 PRICKLE4Q2TBC4 344 aa8.34□□□□□ -1.07
VPS50-207ENST00000458530 ZNF750Q32MQ0 723 aa8.34□□□□□ -1.07
VPS50-207ENST00000458530 RFX4Q33E94 735 aa8.34□□□□□ -1.07
VPS50-207ENST00000458530 TBC1D25Q3MII6 688 aa8.34□□□□□ -1.07
VPS50-207ENST00000458530 MFSD4BQ5TF39 518 aa8.34□□□□□ -1.07
VPS50-207ENST00000458530 OR2T5Q6IEZ7 315 aa8.34□□□□□ -1.07
VPS50-207ENST00000458530 HMBOX1Q6NT76 420 aa8.34□□□□□ -1.07
VPS50-207ENST00000458530 PPP4R4Q6NUP7 873 aa8.34□□□□□ -1.07
VPS50-207ENST00000458530 SLITRK4Q8IW52 837 aa8.34□□□□□ -1.07
VPS50-207ENST00000458530 COX18Q8N8Q8 333 aa8.34□□□□□ -1.07
VPS50-207ENST00000458530 TMEM52Q8NDY8 209 aa8.34□□□□□ -1.07
VPS50-207ENST00000458530 OR7G2Q8NG99 324 aa8.34□□□□□ -1.07
VPS50-207ENST00000458530 OR7G1Q8NGA0 311 aa8.34□□□□□ -1.07
VPS50-207ENST00000458530 OR2T29Q8NH02 315 aa8.34□□□□□ -1.07
VPS50-207ENST00000458530 OR5K1Q8NHB7 308 aa8.34□□□□□ -1.07
VPS50-207ENST00000458530 SPPL2AQ8TCT8 520 aa8.34□□□□□ -1.07
VPS50-207ENST00000458530 NR4A3Q92570 626 aa8.34□□□□□ -1.07
VPS50-207ENST00000458530 RAB8BQ92930 207 aa8.34□□□□□ -1.07
VPS50-207ENST00000458530 RIT1Q92963 219 aa8.34□□□□□ -1.07
VPS50-207ENST00000458530 CLIP3Q96DZ5 547 aa8.34□□□□□ -1.07
VPS50-207ENST00000458530 NRBF2Q96F24 287 aa8.34□□□□□ -1.07
VPS50-207ENST00000458530 NAF1Q96HR8 494 aaKnown RBP8.34□□□□□ -1.07
VPS50-207ENST00000458530 RDH12Q96NR8 316 aa8.34□□□□□ -1.07
VPS50-207ENST00000458530 OR6C1Q96RD1 312 aa8.34□□□□□ -1.07
VPS50-207ENST00000458530 CIB1Q99828 191 aa8.34□□□□□ -1.07
VPS50-207ENST00000458530 TREX2Q9BQ50 279 aaPredicted RBP8.34□□□□□ -1.07
VPS50-207ENST00000458530 OSBPL11Q9BXB4 747 aa8.34□□□□□ -1.07
VPS50-207ENST00000458530 ALOXE3Q9BYJ1 711 aa8.34□□□□□ -1.07
VPS50-207ENST00000458530 RBCK1Q9BYM8 510 aa8.34□□□□□ -1.07
VPS50-207ENST00000458530 STRADBQ9C0K7 418 aa8.34□□□□□ -1.07
VPS50-207ENST00000458530 PIGUQ9H490 435 aa8.34□□□□□ -1.07
VPS50-207ENST00000458530 ARMC7Q9H6L4 198 aa8.34□□□□□ -1.07
VPS50-207ENST00000458530 EVA1AQ9H8M9 152 aa8.34□□□□□ -1.07
VPS50-207ENST00000458530 REEP1Q9H902 201 aa8.34□□□□□ -1.07
VPS50-207ENST00000458530 CXorf21Q9HAI6 301 aa8.34□□□□□ -1.07
VPS50-207ENST00000458530 ADAP2Q9NPF8 381 aa8.34□□□□□ -1.07
VPS50-207ENST00000458530 THSD1Q9NS62 852 aa8.34□□□□□ -1.07
VPS50-207ENST00000458530 PRODH2Q9UF12 536 aa8.34□□□□□ -1.07
VPS50-207ENST00000458530 OAZ3Q9UMX2 235 aa8.34□□□□□ -1.07
VPS50-207ENST00000458530 SLC9A8Q9Y2E8 581 aa8.34□□□□□ -1.07
VPS50-207ENST00000458530 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.33□□□□□ -1.08
VPS50-207ENST00000458530 G3V2T6 193 aa8.33□□□□□ -1.08
VPS50-207ENST00000458530 M0QX08 132 aa8.33□□□□□ -1.08
VPS50-207ENST00000458530 SEC16AO15027 2179 aa8.33□□□□□ -1.08
VPS50-207ENST00000458530 BRINP1O60477 761 aa8.33□□□□□ -1.08
VPS50-207ENST00000458530 CPNE3O75131 537 aaKnown RBP8.33□□□□□ -1.08
VPS50-207ENST00000458530 RFPL3O75679 317 aa8.33□□□□□ -1.08
VPS50-207ENST00000458530 WISP1O95388 367 aa8.33□□□□□ -1.08
VPS50-207ENST00000458530 MED26O95402 600 aa8.33□□□□□ -1.08
VPS50-207ENST00000458530 MT-ND1P03886 318 aa8.33□□□□□ -1.08
VPS50-207ENST00000458530 SEMG1P04279 462 aa8.33□□□□□ -1.08
VPS50-207ENST00000458530 ALPPP05187 535 aa8.33□□□□□ -1.08
VPS50-207ENST00000458530 CTSBP07858 339 aa8.33□□□□□ -1.08
VPS50-207ENST00000458530 UQCRBP14927 111 aa8.33□□□□□ -1.08
VPS50-207ENST00000458530 CDH2P19022 906 aaPredicted RBP8.33□□□□□ -1.08
VPS50-207ENST00000458530 TNNI3P19429 210 aa8.33□□□□□ -1.08
VPS50-207ENST00000458530 AGXTP21549 392 aa8.33□□□□□ -1.08
VPS50-207ENST00000458530 CCKBRP32239 447 aa8.33□□□□□ -1.08
VPS50-207ENST00000458530 IFNA8P32881 189 aa8.33□□□□□ -1.08
VPS50-207ENST00000458530 AQP4P55087 323 aa8.33□□□□□ -1.08
VPS50-207ENST00000458530 SMIM11AP58511 58 aa8.33□□□□□ -1.08
VPS50-207ENST00000458530 SNRPNP63162 240 aaKnown RBP8.33□□□□□ -1.08
VPS50-207ENST00000458530 PSPHP78330 225 aa8.33□□□□□ -1.08
VPS50-207ENST00000458530 MRPS35P82673 323 aaKnown RBP8.33□□□□□ -1.08
VPS50-207ENST00000458530 MAT1AQ00266 395 aaKnown RBP8.33□□□□□ -1.08
VPS50-207ENST00000458530 MED21Q13503 144 aa8.33□□□□□ -1.08
VPS50-207ENST00000458530 C16orf72Q14CZ0 275 aa8.33□□□□□ -1.08
VPS50-207ENST00000458530 ELAVL1Q15717 326 aaKnown RBP8.33□□□□□ -1.08
VPS50-207ENST00000458530 ARHGAP11BQ3KRB8 267 aa8.33□□□□□ -1.08
VPS50-207ENST00000458530 MINDY4Q4G0A6 757 aa8.33□□□□□ -1.08
VPS50-207ENST00000458530 EIPR1Q53HC9 387 aa8.33□□□□□ -1.08
VPS50-207ENST00000458530 FHL5Q5TD97 284 aa8.33□□□□□ -1.08
VPS50-207ENST00000458530 HES3Q5TGS1 186 aa8.33□□□□□ -1.08
VPS50-207ENST00000458530 FAM111BQ6SJ93 734 aa8.33□□□□□ -1.08
VPS50-207ENST00000458530 ZNF574Q6ZN55 896 aaPredicted RBP8.33□□□□□ -1.08
VPS50-207ENST00000458530 RBM44Q6ZP01 1051 aaKnown RBP8.33□□□□□ -1.08
VPS50-207ENST00000458530 VTCN1Q7Z7D3 282 aa8.33□□□□□ -1.08
VPS50-207ENST00000458530 PEX5LQ8IYB4 626 aa8.33□□□□□ -1.08
VPS50-207ENST00000458530 METTL27Q8N6F8 245 aaPredicted RBP8.33□□□□□ -1.08
VPS50-207ENST00000458530 FAM86B1Q8N7N1 296 aa8.33□□□□□ -1.08
VPS50-207ENST00000458530 OR5D16Q8NGK9 328 aa8.33□□□□□ -1.08
VPS50-207ENST00000458530 SLC9A6Q92581 669 aa8.33□□□□□ -1.08
VPS50-207ENST00000458530 TMBIM1Q969X1 311 aa8.33□□□□□ -1.08
VPS50-207ENST00000458530 TAMM41Q96BW9 452 aa8.33□□□□□ -1.08
VPS50-207ENST00000458530 CTHRC1Q96CG8 243 aa8.33□□□□□ -1.08
VPS50-207ENST00000458530 GIMAP5Q96F15 307 aa8.33□□□□□ -1.08
VPS50-207ENST00000458530 ZNF354BQ96LW1 612 aa8.33□□□□□ -1.08
VPS50-207ENST00000458530 PTCHD1Q96NR3 888 aa8.33□□□□□ -1.08
VPS50-207ENST00000458530 COL21A1Q96P44 957 aa8.33□□□□□ -1.08
VPS50-207ENST00000458530 RBM4BQ9BQ04 359 aaKnown RBP8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms