RNA–Protein interactions for RNA: ENST00000457055.1

VPS41-209, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-209ENST00000457055 KIAA1755Q5JYT7 1200 aa5.06□□□□□ -1.6
VPS41-209ENST00000457055 ACER2Q5QJU3 275 aa5.06□□□□□ -1.6
VPS41-209ENST00000457055 C6orf10Q5SRN2 563 aa5.06□□□□□ -1.6
VPS41-209ENST00000457055 ZSCAN25Q6NSZ9 544 aa5.06□□□□□ -1.6
VPS41-209ENST00000457055 RPL13AP3Q6NVV1 102 aa5.06□□□□□ -1.6
VPS41-209ENST00000457055 TMEM220Q6QAJ8 160 aa5.06□□□□□ -1.6
VPS41-209ENST00000457055 CD300LGQ6UXG3 332 aa5.06□□□□□ -1.6
VPS41-209ENST00000457055 DLEU7Q6UYE1 221 aa5.06□□□□□ -1.6
VPS41-209ENST00000457055 SLC16A12Q6ZSM3 486 aa5.06□□□□□ -1.6
VPS41-209ENST00000457055 TMEM26Q6ZUK4 368 aa5.06□□□□□ -1.6
VPS41-209ENST00000457055 C16orf62Q7Z3J2 963 aa5.06□□□□□ -1.6
VPS41-209ENST00000457055 PRIMA1Q86XR5 153 aa5.06□□□□□ -1.6
VPS41-209ENST00000457055 RHOT1Q8IXI2 618 aa5.06□□□□□ -1.6
VPS41-209ENST00000457055 ZNF100Q8IYN0 542 aa5.06□□□□□ -1.6
VPS41-209ENST00000457055 MREGQ8N565 214 aa5.06□□□□□ -1.6
VPS41-209ENST00000457055 BCORP1Q8N888 145 aa5.06□□□□□ -1.6
VPS41-209ENST00000457055 BEND2Q8NDZ0 799 aa5.06□□□□□ -1.6
VPS41-209ENST00000457055 CATSPER1Q8NEC5 780 aa5.06□□□□□ -1.6
VPS41-209ENST00000457055 CCDC54Q8NEL0 328 aa5.06□□□□□ -1.6
VPS41-209ENST00000457055 TRMT10AQ8TBZ6 339 aaKnown RBP5.06□□□□□ -1.6
VPS41-209ENST00000457055 ACTRT1Q8TDG2 376 aa5.06□□□□□ -1.6
VPS41-209ENST00000457055 PTPMT1Q8WUK0 201 aaPredicted RBP5.06□□□□□ -1.6
VPS41-209ENST00000457055 UBTD2Q8WUN7 234 aa5.06□□□□□ -1.6
VPS41-209ENST00000457055 ASB5Q8WWX0 329 aa5.06□□□□□ -1.6
VPS41-209ENST00000457055 ST6GALNAC6Q969X2 333 aa5.06□□□□□ -1.6
VPS41-209ENST00000457055 STAMBPL1Q96FJ0 436 aa5.06□□□□□ -1.6
VPS41-209ENST00000457055 ZNF385AQ96PM9 386 aaKnown RBP5.06□□□□□ -1.6
VPS41-209ENST00000457055 PANX3Q96QZ0 392 aa5.06□□□□□ -1.6
VPS41-209ENST00000457055 EBNA1BP2Q99848 306 aaKnown RBP5.06□□□□□ -1.6
VPS41-209ENST00000457055 SPAG8Q99932 426 aaPredicted RBP5.06□□□□□ -1.6
VPS41-209ENST00000457055 SLC46A2Q9BY10 475 aa5.06□□□□□ -1.6
VPS41-209ENST00000457055 POLDIP3Q9BY77 421 aaKnown RBP5.06□□□□□ -1.6
VPS41-209ENST00000457055 ROPN1BQ9BZX4 212 aaPredicted RBP5.06□□□□□ -1.6
VPS41-209ENST00000457055 STRADBQ9C0K7 418 aa5.06□□□□□ -1.6
VPS41-209ENST00000457055 WWP1Q9H0M0 922 aa5.06□□□□□ -1.6
VPS41-209ENST00000457055 PRDM12Q9H4Q4 367 aa5.06□□□□□ -1.6
VPS41-209ENST00000457055 WDCPQ9H6R7 721 aa5.06□□□□□ -1.6
VPS41-209ENST00000457055 SMYD3Q9H7B4 428 aa5.06□□□□□ -1.6
VPS41-209ENST00000457055 PLGRKTQ9HBL7 147 aa5.06□□□□□ -1.6
VPS41-209ENST00000457055 LRRC4Q9HBW1 653 aa5.06□□□□□ -1.6
VPS41-209ENST00000457055 ABCB9Q9NP78 766 aa5.06□□□□□ -1.6
VPS41-209ENST00000457055 KCNMB3Q9NPA1 279 aa5.06□□□□□ -1.6
VPS41-209ENST00000457055 MKKSQ9NPJ1 570 aaPredicted RBP5.06□□□□□ -1.6
VPS41-209ENST00000457055 DYRK4Q9NR20 520 aa5.06□□□□□ -1.6
VPS41-209ENST00000457055 TMLHEQ9NVH6 421 aa5.06□□□□□ -1.6
VPS41-209ENST00000457055 SDHAF2Q9NX18 166 aa5.06□□□□□ -1.6
VPS41-209ENST00000457055 RDH8Q9NYR8 311 aa5.06□□□□□ -1.6
VPS41-209ENST00000457055 IFNKQ9P0W0 207 aa5.06□□□□□ -1.6
VPS41-209ENST00000457055 ANKFY1Q9P2R3 1169 aa5.06□□□□□ -1.6
VPS41-209ENST00000457055 BTNL2Q9UIR0 455 aa5.06□□□□□ -1.6
VPS41-209ENST00000457055 NDUFAF1Q9Y375 327 aa5.06□□□□□ -1.6
VPS41-209ENST00000457055 MMACHCQ9Y4U1 282 aa5.06□□□□□ -1.6
VPS41-209ENST00000457055 ENTPD2Q9Y5L3 495 aa5.06□□□□□ -1.6
VPS41-209ENST00000457055 ANKRD31Q8N7Z5 1873 aa5.05□□□□□ -1.6
VPS41-209ENST00000457055 ST20-MTHFSA0A0A6YYL1 179 aa5.05□□□□□ -1.6
VPS41-209ENST00000457055 A0A1W2PQM1 296 aa5.05□□□□□ -1.6
VPS41-209ENST00000457055 SMCO3A2RU48 225 aa5.05□□□□□ -1.6
VPS41-209ENST00000457055 VPS37CA5D8V6 355 aaPredicted RBP5.05□□□□□ -1.6
VPS41-209ENST00000457055 TEX22C9J3V5 150 aa5.05□□□□□ -1.6
VPS41-209ENST00000457055 M0QZ92 97 aa5.05□□□□□ -1.6
VPS41-209ENST00000457055 TFECO14948 347 aaPredicted RBP5.05□□□□□ -1.6
VPS41-209ENST00000457055 SURF4O15260 269 aa5.05□□□□□ -1.6
VPS41-209ENST00000457055 FLRT2O43155 660 aa5.05□□□□□ -1.6
VPS41-209ENST00000457055 ATP2C2O75185 946 aa5.05□□□□□ -1.6
VPS41-209ENST00000457055 RBMXL2O75526 392 aaKnown RBP5.05□□□□□ -1.6
VPS41-209ENST00000457055 RAD51DO75771 328 aa5.05□□□□□ -1.6
VPS41-209ENST00000457055 OR7A10O76100 309 aa5.05□□□□□ -1.6
VPS41-209ENST00000457055 ANGPTL1O95841 491 aa5.05□□□□□ -1.6
VPS41-209ENST00000457055 MT-ND1P03886 318 aa5.05□□□□□ -1.6
VPS41-209ENST00000457055 ICAM1P05362 532 aa5.05□□□□□ -1.6
VPS41-209ENST00000457055 ERCC1P07992 297 aaPredicted RBP5.05□□□□□ -1.6
VPS41-209ENST00000457055 RBP1P09455 135 aa5.05□□□□□ -1.6
VPS41-209ENST00000457055 ZDHHC11BP0C7U3 371 aa5.05□□□□□ -1.6
VPS41-209ENST00000457055 ADRB3P13945 408 aa5.05□□□□□ -1.6
VPS41-209ENST00000457055 GNAZP19086 355 aa5.05□□□□□ -1.6
VPS41-209ENST00000457055 IGFBP5P24593 272 aa5.05□□□□□ -1.6
VPS41-209ENST00000457055 HTR2AP28223 471 aa5.05□□□□□ -1.6
VPS41-209ENST00000457055 GTF2E2P29084 291 aaKnown RBP5.05□□□□□ -1.6
VPS41-209ENST00000457055 MARCKSP29966 332 aaPredicted RBP5.05□□□□□ -1.6
VPS41-209ENST00000457055 MAGEA3P43357 314 aa5.05□□□□□ -1.6
VPS41-209ENST00000457055 SRP9P49458 86 aaKnown RBP5.05□□□□□ -1.6
VPS41-209ENST00000457055 HTR6P50406 440 aa5.05□□□□□ -1.6
VPS41-209ENST00000457055 CNN1P51911 297 aaKnown RBP5.05□□□□□ -1.6
VPS41-209ENST00000457055 PTTG1IPP53801 180 aa5.05□□□□□ -1.6
VPS41-209ENST00000457055 WNT3AP56704 352 aa5.05□□□□□ -1.6
VPS41-209ENST00000457055 SLC37A1P57057 533 aa5.05□□□□□ -1.6
VPS41-209ENST00000457055 NAA20P61599 178 aa5.05□□□□□ -1.6
VPS41-209ENST00000457055 RPS7P62081 194 aaKnown RBP5.05□□□□□ -1.6
VPS41-209ENST00000457055 CNTN2Q02246 1040 aa5.05□□□□□ -1.6
VPS41-209ENST00000457055 IRF8Q02556 426 aa5.05□□□□□ -1.6
VPS41-209ENST00000457055 GABPAQ06546 454 aa5.05□□□□□ -1.6
VPS41-209ENST00000457055 TNFRSF9Q07011 255 aa5.05□□□□□ -1.6
VPS41-209ENST00000457055 CD69Q07108 199 aa5.05□□□□□ -1.6
VPS41-209ENST00000457055 STX4Q12846 297 aa5.05□□□□□ -1.6
VPS41-209ENST00000457055 GRM4Q14833 912 aa5.05□□□□□ -1.6
VPS41-209ENST00000457055 ARL6IP1Q15041 203 aa5.05□□□□□ -1.6
VPS41-209ENST00000457055 NAB2Q15742 525 aa5.05□□□□□ -1.6
VPS41-209ENST00000457055 IMPG1Q17R60 797 aa5.05□□□□□ -1.6
VPS41-209ENST00000457055 ACCSLQ4AC99 568 aa5.05□□□□□ -1.6
VPS41-209ENST00000457055 PTPN20Q4JDL3 420 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms