RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 LAMP1P11279 417 aa15.87■□□□□ 0.13
USP39-208ENST00000455732 PNLIPRP2P54317 469 aa15.87■□□□□ 0.13
USP39-208ENST00000455732 MRPS22P82650 360 aaKnown RBP15.87■□□□□ 0.13
USP39-208ENST00000455732 ART3Q13508 389 aa15.87■□□□□ 0.13
USP39-208ENST00000455732 SLC10A1Q14973 349 aa15.87■□□□□ 0.13
USP39-208ENST00000455732 ZNHIT3Q15649 155 aaPredicted RBP15.87■□□□□ 0.13
USP39-208ENST00000455732 FNDC7Q5VTL7 733 aa15.87■□□□□ 0.13
USP39-208ENST00000455732 TMEM198Q66K66 360 aa15.87■□□□□ 0.13
USP39-208ENST00000455732 SLC30A6Q6NXT4 461 aa15.87■□□□□ 0.13
USP39-208ENST00000455732 LARP4Q71RC2 724 aaKnown RBP eCLIP15.87■□□□□ 0.13
USP39-208ENST00000455732 TRILQ7L0X0 811 aa15.87■□□□□ 0.13
USP39-208ENST00000455732 PACS2Q86VP3 889 aa15.87■□□□□ 0.13
USP39-208ENST00000455732 KRTCAP2Q8N6L1 136 aa15.87■□□□□ 0.13
USP39-208ENST00000455732 CEP70Q8NHQ1 597 aa15.87■□□□□ 0.13
USP39-208ENST00000455732 FAM57AQ8TBR7 257 aa15.87■□□□□ 0.13
USP39-208ENST00000455732 TMCO6Q96DC7 493 aa15.87■□□□□ 0.13
USP39-208ENST00000455732 PPP1R36Q96LQ0 422 aa15.87■□□□□ 0.13
USP39-208ENST00000455732 NODALQ96S42 347 aa15.87■□□□□ 0.13
USP39-208ENST00000455732 OSBPL11Q9BXB4 747 aa15.87■□□□□ 0.13
USP39-208ENST00000455732 BHLHE41Q9C0J9 482 aaPredicted RBP15.87■□□□□ 0.13
USP39-208ENST00000455732 Q9N2J8 555 aa15.87■□□□□ 0.13
USP39-208ENST00000455732 ACKR4Q9NPB9 350 aa15.87■□□□□ 0.13
USP39-208ENST00000455732 OR10H1Q9Y4A9 318 aa15.87■□□□□ 0.13
USP39-208ENST00000455732 GIMAP1-GIMAP5A0A087WTJ2 511 aa15.86■□□□□ 0.13
USP39-208ENST00000455732 PRAMEF25A6NGN4 478 aa15.86■□□□□ 0.13
USP39-208ENST00000455732 AQP7O14520 342 aa15.86■□□□□ 0.13
USP39-208ENST00000455732 SDHDO14521 159 aa15.86■□□□□ 0.13
USP39-208ENST00000455732 REM1O75628 298 aa15.86■□□□□ 0.13
USP39-208ENST00000455732 PDE9AO76083 593 aa15.86■□□□□ 0.13
USP39-208ENST00000455732 RFPL3SP0C7P2 107 aa15.86■□□□□ 0.13
USP39-208ENST00000455732 ESRRAP11474 423 aaPredicted RBP15.86■□□□□ 0.13
USP39-208ENST00000455732 LBPP18428 481 aa15.86■□□□□ 0.13
USP39-208ENST00000455732 ELAVL4P26378 380 aaKnown RBP15.86■□□□□ 0.13
USP39-208ENST00000455732 IL12BP29460 328 aa15.86■□□□□ 0.13
USP39-208ENST00000455732 KRT20P35900 424 aa15.86■□□□□ 0.13
USP39-208ENST00000455732 PTGDSP41222 190 aa15.86■□□□□ 0.13
USP39-208ENST00000455732 MAP3K8P41279 467 aa15.86■□□□□ 0.13
USP39-208ENST00000455732 DIO3P55073 304 aa15.86■□□□□ 0.13
USP39-208ENST00000455732 DESI1Q6ICB0 168 aa15.86■□□□□ 0.13
USP39-208ENST00000455732 XKRXQ6PP77 449 aa15.86■□□□□ 0.13
USP39-208ENST00000455732 OR4N2Q8NGD1 307 aa15.86■□□□□ 0.13
USP39-208ENST00000455732 PHF10Q8WUB8 498 aaKnown RBP15.86■□□□□ 0.13
USP39-208ENST00000455732 OR5P2Q8WZ92 322 aa15.86■□□□□ 0.13
USP39-208ENST00000455732 GIMAP5Q96F15 307 aa15.86■□□□□ 0.13
USP39-208ENST00000455732 MS4A4EQ96PG1 132 aa15.86■□□□□ 0.13
USP39-208ENST00000455732 DMRTA2Q96SC8 542 aa15.86■□□□□ 0.13
USP39-208ENST00000455732 ADOQ96SZ5 270 aa15.86■□□□□ 0.13
USP39-208ENST00000455732 UBQLN3Q9H347 655 aa15.86■□□□□ 0.13
USP39-208ENST00000455732 C3orf14Q9HBI5 128 aa15.86■□□□□ 0.13
USP39-208ENST00000455732 NEUROD4Q9HD90 331 aa15.86■□□□□ 0.13
USP39-208ENST00000455732 SIRT3Q9NTG7 399 aaPredicted RBP15.86■□□□□ 0.13
USP39-208ENST00000455732 C15orf41Q9Y2V0 281 aa15.86■□□□□ 0.13
USP39-208ENST00000455732 HRH3Q9Y5N1 445 aa15.86■□□□□ 0.13
USP39-208ENST00000455732 LIPGQ9Y5X9 500 aa15.86■□□□□ 0.13
USP39-208ENST00000455732 ARHGAP21Q5T5U3 1957 aa15.86■□□□□ 0.13
USP39-208ENST00000455732 CREBBPQ92793 2442 aa15.85■□□□□ 0.13
USP39-208ENST00000455732 A0A1W2PRB8 838 aa15.85■□□□□ 0.13
USP39-208ENST00000455732 TRPC5OSA6NMA1 111 aa15.85■□□□□ 0.13
USP39-208ENST00000455732 HMGB1P1B2RPK0 211 aaPredicted RBP15.85■□□□□ 0.13
USP39-208ENST00000455732 E9PLN8 166 aa15.85■□□□□ 0.13
USP39-208ENST00000455732 EMC8O43402 210 aa15.85■□□□□ 0.13
USP39-208ENST00000455732 CELA3AP09093 270 aa15.85■□□□□ 0.13
USP39-208ENST00000455732 AGAP20933 346 aa15.85■□□□□ 0.13
USP39-208ENST00000455732 MASP1P48740 699 aa15.85■□□□□ 0.13
USP39-208ENST00000455732 PRR5P85299 388 aa15.85■□□□□ 0.13
USP39-208ENST00000455732 VPS26BQ4G0F5 336 aa15.85■□□□□ 0.13
USP39-208ENST00000455732 EXOSC6Q5RKV6 272 aaKnown RBP15.85■□□□□ 0.13
USP39-208ENST00000455732 TIGD3Q6B0B8 471 aa15.85■□□□□ 0.13
USP39-208ENST00000455732 ZCCHC12Q6PEW1 402 aa15.85■□□□□ 0.13
USP39-208ENST00000455732 NCCRP1Q6ZVX7 275 aaPredicted RBP15.85■□□□□ 0.13
USP39-208ENST00000455732 CD163Q86VB7 1156 aa15.85■□□□□ 0.13
USP39-208ENST00000455732 EID3Q8N140 333 aa15.85■□□□□ 0.13
USP39-208ENST00000455732 GOLGA6L1Q8N7Z2 621 aa15.85■□□□□ 0.13
USP39-208ENST00000455732 CDRT4Q8N9R6 151 aa15.85■□□□□ 0.13
USP39-208ENST00000455732 NUP43Q8NFH3 380 aa15.85■□□□□ 0.13
USP39-208ENST00000455732 ZNF75CPQ92670 426 aaPredicted RBP15.85■□□□□ 0.13
USP39-208ENST00000455732 JSRP1Q96MG2 331 aaPredicted RBP15.85■□□□□ 0.13
USP39-208ENST00000455732 VKORC1Q9BQB6 163 aa15.85■□□□□ 0.13
USP39-208ENST00000455732 KLRF1Q9NZS2 232 aa15.85■□□□□ 0.13
USP39-208ENST00000455732 CBLCQ9ULV8 474 aa15.85■□□□□ 0.13
USP39-208ENST00000455732 KLF2Q9Y5W3 355 aaPredicted RBP15.85■□□□□ 0.13
USP39-208ENST00000455732 LRBAP50851 2863 aa15.84■□□□□ 0.13
USP39-208ENST00000455732 BCKDKO14874 412 aa15.84■□□□□ 0.13
USP39-208ENST00000455732 SNPHO15079 494 aa15.84■□□□□ 0.13
USP39-208ENST00000455732 ANKRD28O15084 1053 aa15.84■□□□□ 0.13
USP39-208ENST00000455732 ICOSLGO75144 302 aa15.84■□□□□ 0.13
USP39-208ENST00000455732 NKX2-2O95096 273 aa15.84■□□□□ 0.13
USP39-208ENST00000455732 IL33O95760 270 aa15.84■□□□□ 0.13
USP39-208ENST00000455732 HPNP05981 417 aa15.84■□□□□ 0.13
USP39-208ENST00000455732 TPOP07202 933 aa15.84■□□□□ 0.13
USP39-208ENST00000455732 GDF1P27539 372 aa15.84■□□□□ 0.13
USP39-208ENST00000455732 GAB1Q13480 694 aa15.84■□□□□ 0.13
USP39-208ENST00000455732 DECR1Q16698 335 aa15.84■□□□□ 0.13
USP39-208ENST00000455732 LSM12Q3MHD2 195 aaKnown RBP15.84■□□□□ 0.13
USP39-208ENST00000455732 EMC4Q5J8M3 183 aa15.84■□□□□ 0.13
USP39-208ENST00000455732 MFSD12Q6NUT3 480 aa15.84■□□□□ 0.13
USP39-208ENST00000455732 C3P1Q6ZMU1 363 aa15.84■□□□□ 0.13
USP39-208ENST00000455732 WDR75Q8IWA0 830 aaKnown RBP15.84■□□□□ 0.13
USP39-208ENST00000455732 OR8J2Q8NGG1 315 aa15.84■□□□□ 0.13
USP39-208ENST00000455732 TESCQ96BS2 214 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms