RNA–Protein interactions for RNA: ENST00000453796.1

HSPG2-207, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 621 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-207ENST00000453796 ACBD4Q8NC06 268 aa13.29□□□□□ -0.28
HSPG2-207ENST00000453796 RND1Q92730 232 aa13.29□□□□□ -0.28
HSPG2-207ENST00000453796 ZBTB9Q96C00 473 aa13.29□□□□□ -0.28
HSPG2-207ENST00000453796 EFHD2Q96C19 240 aaPredicted RBP13.29□□□□□ -0.28
HSPG2-207ENST00000453796 PPCDCQ96CD2 204 aa13.29□□□□□ -0.28
HSPG2-207ENST00000453796 TMCO6Q96DC7 493 aa13.29□□□□□ -0.28
HSPG2-207ENST00000453796 ZBED6CLQ96FA7 236 aaPredicted RBP13.29□□□□□ -0.28
HSPG2-207ENST00000453796 TTYH2Q9BSA4 534 aa13.29□□□□□ -0.28
HSPG2-207ENST00000453796 LMF2Q9BU23 707 aaKnown RBP13.29□□□□□ -0.28
HSPG2-207ENST00000453796 EXO5Q9H790 373 aa13.29□□□□□ -0.28
HSPG2-207ENST00000453796 ACSS1Q9NUB1 689 aaPredicted RBP13.29□□□□□ -0.28
HSPG2-207ENST00000453796 COQ3Q9NZJ6 369 aa13.29□□□□□ -0.28
HSPG2-207ENST00000453796 KLRF1Q9NZS2 232 aa13.29□□□□□ -0.28
HSPG2-207ENST00000453796 ACAD8Q9UKU7 415 aa13.29□□□□□ -0.28
HSPG2-207ENST00000453796 RNF6Q9Y252 685 aa13.29□□□□□ -0.28
HSPG2-207ENST00000453796 INTS1Q8N201 2190 aaKnown RBP13.28□□□□□ -0.28
HSPG2-207ENST00000453796 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.28□□□□□ -0.28
HSPG2-207ENST00000453796 TMEM114B3SHH9 223 aa13.28□□□□□ -0.28
HSPG2-207ENST00000453796 SCAMP2O15127 329 aaKnown RBP13.28□□□□□ -0.28
HSPG2-207ENST00000453796 ZWINTO95229 277 aa13.28□□□□□ -0.28
HSPG2-207ENST00000453796 GLI4P10075 376 aa13.28□□□□□ -0.28
HSPG2-207ENST00000453796 CYP4B1P13584 511 aa13.28□□□□□ -0.28
HSPG2-207ENST00000453796 GABRA1P14867 456 aa13.28□□□□□ -0.28
HSPG2-207ENST00000453796 MAPK1P28482 360 aa13.28□□□□□ -0.28
HSPG2-207ENST00000453796 IL12BP29460 328 aa13.28□□□□□ -0.28
HSPG2-207ENST00000453796 KIR3DL1P43629 444 aa13.28□□□□□ -0.28
HSPG2-207ENST00000453796 ABCE1P61221 599 aaKnown RBP13.28□□□□□ -0.28
HSPG2-207ENST00000453796 GAB1Q13480 694 aa13.28□□□□□ -0.28
HSPG2-207ENST00000453796 MLC1Q15049 377 aa13.28□□□□□ -0.28
HSPG2-207ENST00000453796 CYP27C1Q4G0S4 372 aa13.28□□□□□ -0.28
HSPG2-207ENST00000453796 ATP6AP1LQ52LC2 224 aa13.28□□□□□ -0.28
HSPG2-207ENST00000453796 EIPR1Q53HC9 387 aa13.28□□□□□ -0.28
HSPG2-207ENST00000453796 C1orf185Q5T7R7 199 aa13.28□□□□□ -0.28
HSPG2-207ENST00000453796 VASNQ6EMK4 673 aa13.28□□□□□ -0.28
HSPG2-207ENST00000453796 B3GNT6Q6ZMB0 384 aa13.28□□□□□ -0.28
HSPG2-207ENST00000453796 ACAD11Q709F0 780 aa13.28□□□□□ -0.28
HSPG2-207ENST00000453796 WDR53Q7Z5U6 358 aaPredicted RBP13.28□□□□□ -0.28
HSPG2-207ENST00000453796 ULK2Q8IYT8 1036 aa13.28□□□□□ -0.28
HSPG2-207ENST00000453796 LIX1Q8N485 282 aa13.28□□□□□ -0.28
HSPG2-207ENST00000453796 ZNF781Q8N8C0 355 aa13.28□□□□□ -0.28
HSPG2-207ENST00000453796 FAM83FQ8NEG4 500 aaPredicted RBP13.28□□□□□ -0.28
HSPG2-207ENST00000453796 ZFP28Q8NHY6 868 aa13.28□□□□□ -0.28
HSPG2-207ENST00000453796 MARVELD3Q96A59 401 aa13.28□□□□□ -0.28
HSPG2-207ENST00000453796 GIMAP5Q96F15 307 aa13.28□□□□□ -0.28
HSPG2-207ENST00000453796 SORT1Q99523 831 aa13.28□□□□□ -0.28
HSPG2-207ENST00000453796 TIMP4Q99727 224 aa13.28□□□□□ -0.28
HSPG2-207ENST00000453796 CENPHQ9H3R5 247 aa13.28□□□□□ -0.28
HSPG2-207ENST00000453796 SH3BP4Q9P0V3 963 aa13.28□□□□□ -0.28
HSPG2-207ENST00000453796 HAO1Q9UJM8 370 aa13.28□□□□□ -0.28
HSPG2-207ENST00000453796 CBLCQ9ULV8 474 aa13.28□□□□□ -0.28
HSPG2-207ENST00000453796 MAPRE3Q9UPY8 281 aa13.28□□□□□ -0.28
HSPG2-207ENST00000453796 WIF1Q9Y5W5 379 aa13.28□□□□□ -0.28
HSPG2-207ENST00000453796 DOCK7Q96N67 2140 aa13.28□□□□□ -0.28
HSPG2-207ENST00000453796 CBR3O75828 277 aa13.27□□□□□ -0.29
HSPG2-207ENST00000453796 TRAPPC6AO75865 159 aa13.27□□□□□ -0.29
HSPG2-207ENST00000453796 HSPA4LO95757 839 aa13.27□□□□□ -0.29
HSPG2-207ENST00000453796 HOXD4P09016 255 aaPredicted RBP13.27□□□□□ -0.29
HSPG2-207ENST00000453796 PRPS2P11908 318 aa13.27□□□□□ -0.29
HSPG2-207ENST00000453796 PRF1P14222 555 aa13.27□□□□□ -0.29
HSPG2-207ENST00000453796 CHRNB4P30926 498 aa13.27□□□□□ -0.29
HSPG2-207ENST00000453796 KRT20P35900 424 aa13.27□□□□□ -0.29
HSPG2-207ENST00000453796 MANFP55145 182 aaKnown RBP13.27□□□□□ -0.29
HSPG2-207ENST00000453796 TFF3Q07654 80 aa13.27□□□□□ -0.29
HSPG2-207ENST00000453796 PTGR1Q14914 329 aa13.27□□□□□ -0.29
HSPG2-207ENST00000453796 WIPI1Q5MNZ9 446 aaPredicted RBP13.27□□□□□ -0.29
HSPG2-207ENST00000453796 EXOSC6Q5RKV6 272 aaKnown RBP13.27□□□□□ -0.29
HSPG2-207ENST00000453796 BEND6Q5SZJ8 279 aaPredicted RBP13.27□□□□□ -0.29
HSPG2-207ENST00000453796 DCST1Q5T197 706 aa13.27□□□□□ -0.29
HSPG2-207ENST00000453796 IL23RQ5VWK5 629 aa13.27□□□□□ -0.29
HSPG2-207ENST00000453796 SEM1Q6ZVN7 128 aa13.27□□□□□ -0.29
HSPG2-207ENST00000453796 R3HCC1LQ7Z5L2 792 aaKnown RBP13.27□□□□□ -0.29
HSPG2-207ENST00000453796 RIMKLAQ8IXN7 391 aa13.27□□□□□ -0.29
HSPG2-207ENST00000453796 OR7A2PQ8NGA2 310 aa13.27□□□□□ -0.29
HSPG2-207ENST00000453796 LILRB4Q8NHJ6 448 aa13.27□□□□□ -0.29
HSPG2-207ENST00000453796 PPP1R14CQ8TAE6 165 aa13.27□□□□□ -0.29
HSPG2-207ENST00000453796 CA5BP1Q8WTZ4 195 aa13.27□□□□□ -0.29
HSPG2-207ENST00000453796 ASB5Q8WWX0 329 aa13.27□□□□□ -0.29
HSPG2-207ENST00000453796 C1orf50Q9BV19 199 aa13.27□□□□□ -0.29
HSPG2-207ENST00000453796 OR2B2Q9GZK3 357 aa13.27□□□□□ -0.29
HSPG2-207ENST00000453796 PRDM14Q9GZV8 571 aa13.27□□□□□ -0.29
HSPG2-207ENST00000453796 SERHLQ9NQF3 203 aa13.27□□□□□ -0.29
HSPG2-207ENST00000453796 SIRT3Q9NTG7 399 aaPredicted RBP13.27□□□□□ -0.29
HSPG2-207ENST00000453796 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.27□□□□□ -0.29
HSPG2-207ENST00000453796 SLC6A5Q9Y345 797 aa13.27□□□□□ -0.29
HSPG2-207ENST00000453796 RAP2CQ9Y3L5 183 aa13.27□□□□□ -0.29
HSPG2-207ENST00000453796 OR10H1Q9Y4A9 318 aa13.27□□□□□ -0.29
HSPG2-207ENST00000453796 FBN2P35556 2912 aa13.26□□□□□ -0.29
HSPG2-207ENST00000453796 C15orf38-AP3S2A0A0A6YYH1 394 aa13.26□□□□□ -0.29
HSPG2-207ENST00000453796 A0A0G2JNJ9 132 aa13.26□□□□□ -0.29
HSPG2-207ENST00000453796 TTC36A6NLP5 189 aa13.26□□□□□ -0.29
HSPG2-207ENST00000453796 FADS1O60427 444 aa13.26□□□□□ -0.29
HSPG2-207ENST00000453796 NKX2-2O95096 273 aa13.26□□□□□ -0.29
HSPG2-207ENST00000453796 SNUPNO95149 360 aaKnown RBP13.26□□□□□ -0.29
HSPG2-207ENST00000453796 IL33O95760 270 aa13.26□□□□□ -0.29
HSPG2-207ENST00000453796 LAMP1P11279 417 aa13.26□□□□□ -0.29
HSPG2-207ENST00000453796 BMP7P18075 431 aa13.26□□□□□ -0.29
HSPG2-207ENST00000453796 BGNP21810 368 aa13.26□□□□□ -0.29
HSPG2-207ENST00000453796 GRK2P25098 689 aa13.26□□□□□ -0.29
HSPG2-207ENST00000453796 EVI2BP34910 448 aa13.26□□□□□ -0.29
HSPG2-207ENST00000453796 GPC1P35052 558 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms