RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 ZFP62Q8NB50 900 aaPredicted RBP15.71■□□□□ 0.11
PRPF40A-204ENST00000450303 OR52N2Q8NGI0 321 aa15.71■□□□□ 0.11
PRPF40A-204ENST00000450303 C16orf52Q8NHV5 167 aa15.71■□□□□ 0.11
PRPF40A-204ENST00000450303 LEF1Q9UJU2 399 aaPredicted RBP15.71■□□□□ 0.11
PRPF40A-204ENST00000450303 ERVK-19Q9WJR5 959 aa15.71■□□□□ 0.11
PRPF40A-204ENST00000450303 LOC100653049A0A140TA62 436 aa15.7■□□□□ 0.1
PRPF40A-204ENST00000450303 FAM166BA8MTA8 275 aa15.7■□□□□ 0.1
PRPF40A-204ENST00000450303 MYO1GB0I1T2 1018 aa15.7■□□□□ 0.1
PRPF40A-204ENST00000450303 B2RBV5 119 aa15.7■□□□□ 0.1
PRPF40A-204ENST00000450303 C9JVG2 144 aa15.7■□□□□ 0.1
PRPF40A-204ENST00000450303 DYRK3O43781 588 aa15.7■□□□□ 0.1
PRPF40A-204ENST00000450303 KRT34O76011 436 aa15.7■□□□□ 0.1
PRPF40A-204ENST00000450303 IGKV3-11P04433 115 aa15.7■□□□□ 0.1
PRPF40A-204ENST00000450303 SLC35E2P0CK97 266 aa15.7■□□□□ 0.1
PRPF40A-204ENST00000450303 CPMP14384 443 aa15.7■□□□□ 0.1
PRPF40A-204ENST00000450303 GRNP28799 593 aaKnown RBP15.7■□□□□ 0.1
PRPF40A-204ENST00000450303 FEN1P39748 380 aaKnown RBP15.7■□□□□ 0.1
PRPF40A-204ENST00000450303 NCBP2P52298 156 aaKnown RBP eCLIP15.7■□□□□ 0.12e-16■□□□□ 8.3
PRPF40A-204ENST00000450303 PLGLB1Q02325 96 aa15.7■□□□□ 0.1
PRPF40A-204ENST00000450303 MLC1Q15049 377 aa15.7■□□□□ 0.1
PRPF40A-204ENST00000450303 CEBPEQ15744 281 aa15.7■□□□□ 0.1
PRPF40A-204ENST00000450303 VPS26BQ4G0F5 336 aa15.7■□□□□ 0.1
PRPF40A-204ENST00000450303 TIGD2Q4W5G0 525 aa15.7■□□□□ 0.1
PRPF40A-204ENST00000450303 CMPK2Q5EBM0 449 aa15.7■□□□□ 0.1
PRPF40A-204ENST00000450303 PIGGQ5H8A4 983 aa15.7■□□□□ 0.1
PRPF40A-204ENST00000450303 RTL4Q6ZR62 310 aa15.7■□□□□ 0.1
PRPF40A-204ENST00000450303 SNX32Q86XE0 403 aa15.7■□□□□ 0.1
PRPF40A-204ENST00000450303 DOLPP1Q86YN1 238 aa15.7■□□□□ 0.1
PRPF40A-204ENST00000450303 PCYOX1LQ8NBM8 494 aa15.7■□□□□ 0.1
PRPF40A-204ENST00000450303 OR2M7Q8NG81 312 aa15.7■□□□□ 0.1
PRPF40A-204ENST00000450303 OR5P2Q8WZ92 322 aa15.7■□□□□ 0.1
PRPF40A-204ENST00000450303 RIT1Q92963 219 aa15.7■□□□□ 0.1
PRPF40A-204ENST00000450303 CNRIP1Q96F85 164 aaPredicted RBP15.7■□□□□ 0.1
PRPF40A-204ENST00000450303 FBXL20Q96IG2 436 aa15.7■□□□□ 0.1
PRPF40A-204ENST00000450303 ITCHQ96J02 903 aa15.7■□□□□ 0.1
PRPF40A-204ENST00000450303 PHF12Q96QT6 1004 aa15.7■□□□□ 0.1
PRPF40A-204ENST00000450303 BTNL2Q9UIR0 455 aa15.7■□□□□ 0.1
PRPF40A-204ENST00000450303 GSC2O15499 205 aa15.69■□□□□ 0.1
PRPF40A-204ENST00000450303 SLITRK5O94991 958 aa15.69■□□□□ 0.1
PRPF40A-204ENST00000450303 CNR1P21554 472 aa15.69■□□□□ 0.1
PRPF40A-204ENST00000450303 NT5EP21589 574 aa15.69■□□□□ 0.1
PRPF40A-204ENST00000450303 GALNSP34059 522 aa15.69■□□□□ 0.1
PRPF40A-204ENST00000450303 GPC1P35052 558 aa15.69■□□□□ 0.1
PRPF40A-204ENST00000450303 PGM1P36871 562 aa15.69■□□□□ 0.1
PRPF40A-204ENST00000450303 FRKP42685 505 aaPredicted RBP15.69■□□□□ 0.1
PRPF40A-204ENST00000450303 ZFP36L2P47974 494 aaKnown RBP15.69■□□□□ 0.1
PRPF40A-204ENST00000450303 PPIAP62937 165 aaKnown RBP15.69■□□□□ 0.1
PRPF40A-204ENST00000450303 COQ5Q5HYK3 327 aa15.69■□□□□ 0.1
PRPF40A-204ENST00000450303 MTFR2Q6P444 385 aa15.69■□□□□ 0.1
PRPF40A-204ENST00000450303 OPN5Q6U736 354 aa15.69■□□□□ 0.1
PRPF40A-204ENST00000450303 TREML1Q86YW5 311 aa15.69■□□□□ 0.1
PRPF40A-204ENST00000450303 CCDC116Q8IYX3 515 aa15.69■□□□□ 0.1
PRPF40A-204ENST00000450303 ZNF808Q8N4W9 903 aaPredicted RBP15.69■□□□□ 0.1
PRPF40A-204ENST00000450303 CIDECQ96AQ7 238 aaPredicted RBP15.69■□□□□ 0.1
PRPF40A-204ENST00000450303 ART5Q96L15 291 aa15.69■□□□□ 0.1
PRPF40A-204ENST00000450303 ZNF681Q96N22 645 aa15.69■□□□□ 0.1
PRPF40A-204ENST00000450303 GAL3ST4Q96RP7 486 aa15.69■□□□□ 0.1
PRPF40A-204ENST00000450303 MEMO1Q9Y316 297 aa15.69■□□□□ 0.1
PRPF40A-204ENST00000450303 ZNF407Q9C0G0 2248 aa15.69■□□□□ 0.1
PRPF40A-204ENST00000450303 NCOA6Q14686 2063 aaPredicted RBP15.69■□□□□ 0.1
PRPF40A-204ENST00000450303 CRYBG3Q68DQ2 2970 aa15.68■□□□□ 0.1
PRPF40A-204ENST00000450303 PRRG2O14669 202 aa15.68■□□□□ 0.1
PRPF40A-204ENST00000450303 NADKO95544 446 aaPredicted RBP15.68■□□□□ 0.1
PRPF40A-204ENST00000450303 ANP32DO95626 131 aa15.68■□□□□ 0.1
PRPF40A-204ENST00000450303 CPSF4O95639 269 aaKnown RBP15.68■□□□□ 0.1
PRPF40A-204ENST00000450303 ATP1B1P05026 303 aa15.68■□□□□ 0.1
PRPF40A-204ENST00000450303 TPOP07202 933 aa15.68■□□□□ 0.1
PRPF40A-204ENST00000450303 CCL3P10147 92 aa15.68■□□□□ 0.1
PRPF40A-204ENST00000450303 CAPN3P20807 821 aa15.68■□□□□ 0.1
PRPF40A-204ENST00000450303 SSTR4P31391 388 aa15.68■□□□□ 0.1
PRPF40A-204ENST00000450303 PTGS2P35354 604 aa15.68■□□□□ 0.1
PRPF40A-204ENST00000450303 TRPC1P48995 793 aa15.68■□□□□ 0.1
PRPF40A-204ENST00000450303 DNASE1L1P49184 302 aa15.68■□□□□ 0.1
PRPF40A-204ENST00000450303 WNT3P56703 355 aa15.68■□□□□ 0.1
PRPF40A-204ENST00000450303 MPEG1Q2M385 716 aa15.68■□□□□ 0.1
PRPF40A-204ENST00000450303 RNF111Q6ZNA4 994 aa15.68■□□□□ 0.1
PRPF40A-204ENST00000450303 RINLQ6ZS11 566 aa15.68■□□□□ 0.1
PRPF40A-204ENST00000450303 TRIML2Q8N7C3 387 aa15.68■□□□□ 0.1
PRPF40A-204ENST00000450303 FAM13CQ8NE31 585 aa15.68■□□□□ 0.1
PRPF40A-204ENST00000450303 NUBPLQ8TB37 319 aa15.68■□□□□ 0.1
PRPF40A-204ENST00000450303 NUDT8Q8WV74 236 aa15.68■□□□□ 0.1
PRPF40A-204ENST00000450303 VPS33AQ96AX1 596 aa15.68■□□□□ 0.1
PRPF40A-204ENST00000450303 AMDHD1Q96NU7 426 aa15.68■□□□□ 0.1
PRPF40A-204ENST00000450303 PANX1Q96RD7 426 aa15.68■□□□□ 0.1
PRPF40A-204ENST00000450303 CADM1Q9BY67 442 aaKnown RBP15.68■□□□□ 0.1
PRPF40A-204ENST00000450303 C1orf21Q9H246 121 aa15.68■□□□□ 0.1
PRPF40A-204ENST00000450303 GLIPR2Q9H4G4 154 aa15.68■□□□□ 0.1
PRPF40A-204ENST00000450303 EFCAB1Q9HAE3 211 aa15.68■□□□□ 0.1
PRPF40A-204ENST00000450303 NEUROD4Q9HD90 331 aa15.68■□□□□ 0.1
PRPF40A-204ENST00000450303 GID8Q9NWU2 228 aa15.68■□□□□ 0.1
PRPF40A-204ENST00000450303 NOTCH2Q04721 2471 aa15.67■□□□□ 0.1
PRPF40A-204ENST00000450303 CELSR2Q9HCU4 2923 aa15.67■□□□□ 0.1
PRPF40A-204ENST00000450303 RFXANKO14593 260 aa15.67■□□□□ 0.1
PRPF40A-204ENST00000450303 KCNH1O95259 989 aa15.67■□□□□ 0.1
PRPF40A-204ENST00000450303 C6orf47O95873 294 aa15.67■□□□□ 0.1
PRPF40A-204ENST00000450303 CLPSP04118 112 aa15.67■□□□□ 0.1
PRPF40A-204ENST00000450303 P04436 131 aa15.67■□□□□ 0.1
PRPF40A-204ENST00000450303 CT62P0C5K7 136 aa15.67■□□□□ 0.1
PRPF40A-204ENST00000450303 PIGAP37287 484 aa15.67■□□□□ 0.1
PRPF40A-204ENST00000450303 SLC37A1P57057 533 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms