RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 RHBDD1Q8TEB9 315 aa13.26□□□□□ -0.29
USP39-207ENST00000450066 PTPMT1Q8WUK0 201 aaPredicted RBP13.26□□□□□ -0.29
USP39-207ENST00000450066 MBOAT4Q96T53 435 aa13.26□□□□□ -0.29
USP39-207ENST00000450066 WFDC6Q9BQY6 131 aa13.26□□□□□ -0.29
USP39-207ENST00000450066 CNPPD1Q9BV87 410 aa13.26□□□□□ -0.29
USP39-207ENST00000450066 TGIF2Q9GZN2 237 aa13.26□□□□□ -0.29
USP39-207ENST00000450066 CACYBPQ9HB71 228 aaKnown RBP13.26□□□□□ -0.29
USP39-207ENST00000450066 POLE3Q9NRF9 147 aa13.26□□□□□ -0.29
USP39-207ENST00000450066 ACAD8Q9UKU7 415 aa13.26□□□□□ -0.29
USP39-207ENST00000450066 ERVK-19Q9WJR5 959 aa13.26□□□□□ -0.29
USP39-207ENST00000450066 TCRBV16S1A1N1A0A5B0 115 aa13.25□□□□□ -0.29
USP39-207ENST00000450066 AGAP5A6NIR3 686 aa13.25□□□□□ -0.29
USP39-207ENST00000450066 SEMA7AO75326 666 aa13.25□□□□□ -0.29
USP39-207ENST00000450066 GADD45GO95257 159 aa13.25□□□□□ -0.29
USP39-207ENST00000450066 TIAF1O95411 115 aa13.25□□□□□ -0.29
USP39-207ENST00000450066 GUSBP08236 651 aa13.25□□□□□ -0.29
USP39-207ENST00000450066 HBQ1P09105 142 aa13.25□□□□□ -0.29
USP39-207ENST00000450066 CSTF2P33240 577 aaKnown RBP eCLIP13.25□□□□□ -0.29
USP39-207ENST00000450066 RORAP35398 523 aa13.25□□□□□ -0.29
USP39-207ENST00000450066 PSG6Q00889 435 aa13.25□□□□□ -0.29
USP39-207ENST00000450066 IL11RAQ14626 422 aa13.25□□□□□ -0.29
USP39-207ENST00000450066 MICAQ29983 383 aa13.25□□□□□ -0.29
USP39-207ENST00000450066 COLEC12Q5KU26 742 aa13.25□□□□□ -0.29
USP39-207ENST00000450066 CCNJQ5T5M9 372 aa13.25□□□□□ -0.29
USP39-207ENST00000450066 TTC23Q5W5X9 447 aa13.25□□□□□ -0.29
USP39-207ENST00000450066 VRK2Q86Y07 508 aa13.25□□□□□ -0.29
USP39-207ENST00000450066 RBM45Q8IUH3 476 aaKnown RBP13.25□□□□□ -0.29
USP39-207ENST00000450066 LACC1Q8IV20 430 aa13.25□□□□□ -0.29
USP39-207ENST00000450066 ZNF615Q8N8J6 731 aa13.25□□□□□ -0.29
USP39-207ENST00000450066 SLC38A9Q8NBW4 561 aa13.25□□□□□ -0.29
USP39-207ENST00000450066 OR52J3Q8NH60 311 aa13.25□□□□□ -0.29
USP39-207ENST00000450066 GIPC3Q8TF64 312 aa13.25□□□□□ -0.29
USP39-207ENST00000450066 PHF10Q8WUB8 498 aaKnown RBP13.25□□□□□ -0.29
USP39-207ENST00000450066 FKBP10Q96AY3 582 aa13.25□□□□□ -0.29
USP39-207ENST00000450066 FBXL20Q96IG2 436 aa13.25□□□□□ -0.29
USP39-207ENST00000450066 OR10A5Q9H207 317 aa13.25□□□□□ -0.29
USP39-207ENST00000450066 SOX17Q9H6I2 414 aaPredicted RBP13.25□□□□□ -0.29
USP39-207ENST00000450066 SLC22A11Q9NSA0 550 aa13.25□□□□□ -0.29
USP39-207ENST00000450066 FAM118AQ9NWS6 357 aa13.25□□□□□ -0.29
USP39-207ENST00000450066 KIF17Q9P2E2 1029 aa13.25□□□□□ -0.29
USP39-207ENST00000450066 FTSJ1Q9UET6 329 aa13.25□□□□□ -0.29
USP39-207ENST00000450066 SCOCQ9UIL1 159 aa13.25□□□□□ -0.29
USP39-207ENST00000450066 ZNF232Q9UNY5 417 aa13.25□□□□□ -0.29
USP39-207ENST00000450066 IGLV3-12A0A075B6K2 115 aa13.25□□□□□ -0.29
USP39-207ENST00000450066 SYNDIG1LA6NDD5 238 aa13.25□□□□□ -0.29
USP39-207ENST00000450066 TTC36A6NLP5 189 aa13.25□□□□□ -0.29
USP39-207ENST00000450066 EIF4E1BA6NMX2 242 aaKnown RBP13.25□□□□□ -0.29
USP39-207ENST00000450066 M0R3H8 397 aa13.25□□□□□ -0.29
USP39-207ENST00000450066 DYRK3O43781 588 aa13.25□□□□□ -0.29
USP39-207ENST00000450066 KIAA0513O60268 411 aa13.25□□□□□ -0.29
USP39-207ENST00000450066 THBS1P07996 1170 aa13.25□□□□□ -0.29
USP39-207ENST00000450066 MYBPC1Q00872 1141 aa13.25□□□□□ -0.29
USP39-207ENST00000450066 GANABQ14697 944 aaKnown RBP13.25□□□□□ -0.29
USP39-207ENST00000450066 LARS2Q15031 903 aaKnown RBP13.25□□□□□ -0.29
USP39-207ENST00000450066 EXOC3L2Q2M3D2 409 aa13.25□□□□□ -0.29
USP39-207ENST00000450066 TMEM154Q6P9G4 183 aa13.25□□□□□ -0.29
USP39-207ENST00000450066 DEF8Q6ZN54 512 aa13.25□□□□□ -0.29
USP39-207ENST00000450066 COX15Q7KZN9 410 aa13.25□□□□□ -0.29
USP39-207ENST00000450066 B3GNT8Q7Z7M8 397 aa13.25□□□□□ -0.29
USP39-207ENST00000450066 TMEM151BQ8IW70 566 aa13.25□□□□□ -0.29
USP39-207ENST00000450066 ZNF619Q8N2I2 560 aa13.25□□□□□ -0.29
USP39-207ENST00000450066 ATG16L2Q8NAA4 619 aa13.25□□□□□ -0.29
USP39-207ENST00000450066 PIK3C3Q8NEB9 887 aa13.25□□□□□ -0.29
USP39-207ENST00000450066 C16orf52Q8NHV5 167 aa13.25□□□□□ -0.29
USP39-207ENST00000450066 ATOH1Q92858 354 aaPredicted RBP13.25□□□□□ -0.29
USP39-207ENST00000450066 TSLPQ969D9 159 aa13.25□□□□□ -0.29
USP39-207ENST00000450066 CLIP3Q96DZ5 547 aa13.25□□□□□ -0.29
USP39-207ENST00000450066 DHRS1Q96LJ7 313 aa13.25□□□□□ -0.29
USP39-207ENST00000450066 ARHGDIGQ99819 225 aa13.25□□□□□ -0.29
USP39-207ENST00000450066 NMNAT1Q9HAN9 279 aaPredicted RBP13.25□□□□□ -0.29
USP39-207ENST00000450066 BATF3Q9NR55 127 aa13.25□□□□□ -0.29
USP39-207ENST00000450066 PNPLA3Q9NST1 481 aa13.25□□□□□ -0.29
USP39-207ENST00000450066 OCIAD1Q9NX40 245 aa13.25□□□□□ -0.29
USP39-207ENST00000450066 SLC13A4Q9UKG4 626 aa13.25□□□□□ -0.29
USP39-207ENST00000450066 PCDHGA8Q9Y5G5 932 aa13.25□□□□□ -0.29
USP39-207ENST00000450066 COL5A1P20908 1838 aaPredicted RBP13.25□□□□□ -0.29
USP39-207ENST00000450066 ASCC3Q8N3C0 2202 aaKnown RBP13.25□□□□□ -0.29
USP39-207ENST00000450066 NUP210LQ5VU65 1888 aa13.25□□□□□ -0.29
USP39-207ENST00000450066 GXYLT2A0PJZ3 443 aa13.24□□□□□ -0.29
USP39-207ENST00000450066 AGRPO00253 132 aa13.24□□□□□ -0.29
USP39-207ENST00000450066 BRINP1O60477 761 aa13.24□□□□□ -0.29
USP39-207ENST00000450066 KCNK2O95069 426 aa13.24□□□□□ -0.29
USP39-207ENST00000450066 TNFAIP8O95379 198 aa13.24□□□□□ -0.29
USP39-207ENST00000450066 ONECUT2O95948 504 aa13.24□□□□□ -0.29
USP39-207ENST00000450066 FGF5P12034 268 aa13.24□□□□□ -0.29
USP39-207ENST00000450066 IL7RP16871 459 aa13.24□□□□□ -0.29
USP39-207ENST00000450066 RPS4Y1P22090 263 aaKnown RBP13.24□□□□□ -0.29
USP39-207ENST00000450066 SMIM11AP58511 58 aa13.24□□□□□ -0.29
USP39-207ENST00000450066 KCNAB2Q13303 367 aa13.24□□□□□ -0.29
USP39-207ENST00000450066 ELAVL1Q15717 326 aaKnown RBP13.24□□□□□ -0.29
USP39-207ENST00000450066 NSDHLQ15738 373 aa13.24□□□□□ -0.29
USP39-207ENST00000450066 GPR68Q15743 365 aa13.24□□□□□ -0.29
USP39-207ENST00000450066 NKAIN1Q4KMZ8 207 aa13.24□□□□□ -0.29
USP39-207ENST00000450066 AGBL5Q8NDL9 886 aa13.24□□□□□ -0.29
USP39-207ENST00000450066 ZNF555Q8NEP9 628 aa13.24□□□□□ -0.29
USP39-207ENST00000450066 OR6T1Q8NGN1 323 aa13.24□□□□□ -0.29
USP39-207ENST00000450066 SENP5Q96HI0 755 aaPredicted RBP13.24□□□□□ -0.29
USP39-207ENST00000450066 PSD2Q9BQI7 771 aa13.24□□□□□ -0.29
USP39-207ENST00000450066 VN1R1Q9GZP7 353 aa13.24□□□□□ -0.29
USP39-207ENST00000450066 C11orf16Q9NQ32 467 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms