RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 TMEM247A6NEH6 219 aa13□□□□□ -0.33
SHMT2-203ENST00000449049 NKX2-8O15522 239 aa13□□□□□ -0.33
SHMT2-203ENST00000449049 EIF2S3P41091 472 aaKnown RBP13□□□□□ -0.33
SHMT2-203ENST00000449049 AP2B1P63010 937 aa13□□□□□ -0.33
SHMT2-203ENST00000449049 MS4A2Q01362 244 aa13□□□□□ -0.33
SHMT2-203ENST00000449049 CDC20Q12834 499 aa13□□□□□ -0.33
SHMT2-203ENST00000449049 CHAF1BQ13112 559 aa13□□□□□ -0.33
SHMT2-203ENST00000449049 GNA13Q14344 377 aa13□□□□□ -0.33
SHMT2-203ENST00000449049 NNATQ16517 81 aa13□□□□□ -0.33
SHMT2-203ENST00000449049 CYP27C1Q4G0S4 372 aa13□□□□□ -0.33
SHMT2-203ENST00000449049 DCST2Q5T1A1 773 aa13□□□□□ -0.33
SHMT2-203ENST00000449049 ATP1A1-AS1Q5TC04 95 aa13□□□□□ -0.33
SHMT2-203ENST00000449049 PRAMEF8Q5VWM4 474 aa13□□□□□ -0.33
SHMT2-203ENST00000449049 PRAMEF7Q5VXH5 474 aa13□□□□□ -0.33
SHMT2-203ENST00000449049 C16orf62Q7Z3J2 963 aa13□□□□□ -0.33
SHMT2-203ENST00000449049 KBTBD2Q8IY47 623 aa13□□□□□ -0.33
SHMT2-203ENST00000449049 ARMC10Q8N2F6 343 aa13□□□□□ -0.33
SHMT2-203ENST00000449049 ANKFN1Q8N957 763 aa13□□□□□ -0.33
SHMT2-203ENST00000449049 HIPK4Q8NE63 616 aa13□□□□□ -0.33
SHMT2-203ENST00000449049 OR4N2Q8NGD1 307 aa13□□□□□ -0.33
SHMT2-203ENST00000449049 FAM110BQ8TC76 370 aa13□□□□□ -0.33
SHMT2-203ENST00000449049 HSPBAP1Q96EW2 488 aa13□□□□□ -0.33
SHMT2-203ENST00000449049 EGFL7Q9UHF1 273 aa13□□□□□ -0.33
SHMT2-203ENST00000449049 MAGEL2Q9UJ55 1249 aa13□□□□□ -0.33
SHMT2-203ENST00000449049 CBLCQ9ULV8 474 aa13□□□□□ -0.33
SHMT2-203ENST00000449049 ANGPT4Q9Y264 503 aa13□□□□□ -0.33
SHMT2-203ENST00000449049 ACOT8O14734 319 aa12.99□□□□□ -0.33
SHMT2-203ENST00000449049 ACOX3O15254 700 aa12.99□□□□□ -0.33
SHMT2-203ENST00000449049 EFSO43281 561 aa12.99□□□□□ -0.33
SHMT2-203ENST00000449049 SLC28A2O43868 658 aa12.99□□□□□ -0.33
SHMT2-203ENST00000449049 KCNK2O95069 426 aa12.99□□□□□ -0.33
SHMT2-203ENST00000449049 CHRM4P08173 479 aa12.99□□□□□ -0.33
SHMT2-203ENST00000449049 GUSBP08236 651 aa12.99□□□□□ -0.33
SHMT2-203ENST00000449049 NR2F1P10589 423 aa12.99□□□□□ -0.33
SHMT2-203ENST00000449049 ITGAMP11215 1152 aa12.99□□□□□ -0.33
SHMT2-203ENST00000449049 SOX11P35716 441 aa12.99□□□□□ -0.33
SHMT2-203ENST00000449049 PIGAP37287 484 aa12.99□□□□□ -0.33
SHMT2-203ENST00000449049 CRISP3P54108 245 aa12.99□□□□□ -0.33
SHMT2-203ENST00000449049 MRPS22P82650 360 aaKnown RBP12.99□□□□□ -0.33
SHMT2-203ENST00000449049 TRAP1Q12931 704 aaKnown RBP12.99□□□□□ -0.33
SHMT2-203ENST00000449049 AP1ARQ63HQ0 302 aa12.99□□□□□ -0.33
SHMT2-203ENST00000449049 REEP3Q6NUK4 255 aa12.99□□□□□ -0.33
SHMT2-203ENST00000449049 RMND5BQ96G75 393 aaPredicted RBP12.99□□□□□ -0.33
SHMT2-203ENST00000449049 SDF2Q99470 211 aa12.99□□□□□ -0.33
SHMT2-203ENST00000449049 ZNF350Q9GZX5 532 aa12.99□□□□□ -0.33
SHMT2-203ENST00000449049 RUBCNLQ9H714 662 aa12.99□□□□□ -0.33
SHMT2-203ENST00000449049 BCL2L10Q9HD36 194 aa12.99□□□□□ -0.33
SHMT2-203ENST00000449049 MYOTQ9UBF9 498 aa12.99□□□□□ -0.33
SHMT2-203ENST00000449049 OR10H1Q9Y4A9 318 aa12.99□□□□□ -0.33
SHMT2-203ENST00000449049 SNX13Q9Y5W8 968 aa12.99□□□□□ -0.33
SHMT2-203ENST00000449049 C5orf58C9J3I9 102 aa12.98□□□□□ -0.33
SHMT2-203ENST00000449049 CXCR6O00574 342 aa12.98□□□□□ -0.33
SHMT2-203ENST00000449049 ARPC2O15144 300 aa12.98□□□□□ -0.33
SHMT2-203ENST00000449049 GSTA4O15217 222 aa12.98□□□□□ -0.33
SHMT2-203ENST00000449049 NR0B1P51843 470 aaKnown RBP12.98□□□□□ -0.33
SHMT2-203ENST00000449049 PCBP3P57721 371 aaKnown RBP12.98□□□□□ -0.33
SHMT2-203ENST00000449049 AIMP2Q13155 320 aaKnown RBP12.98□□□□□ -0.33
SHMT2-203ENST00000449049 GPAT3Q53EU6 434 aa12.98□□□□□ -0.33
SHMT2-203ENST00000449049 INTS11Q5TA45 600 aaKnown RBP12.98□□□□□ -0.33
SHMT2-203ENST00000449049 GLYATQ6IB77 296 aa12.98□□□□□ -0.33
SHMT2-203ENST00000449049 H3F3CQ6NXT2 135 aa12.98□□□□□ -0.33
SHMT2-203ENST00000449049 LRRC74BQ6ZQY2 392 aa12.98□□□□□ -0.33
SHMT2-203ENST00000449049 PROSER1Q86XN7 944 aa12.98□□□□□ -0.33
SHMT2-203ENST00000449049 BCORP1Q8N888 145 aa12.98□□□□□ -0.33
SHMT2-203ENST00000449049 CALML5Q9NZT1 146 aa12.98□□□□□ -0.33
SHMT2-203ENST00000449049 ACTR3BQ9P1U1 418 aa12.98□□□□□ -0.33
SHMT2-203ENST00000449049 PIEZO1Q92508 2521 aa12.98□□□□□ -0.33
SHMT2-203ENST00000449049 DSPPQ9NZW4 1301 aa12.98□□□□□ -0.33
SHMT2-203ENST00000449049 MGRN1O60291 552 aa12.98□□□□□ -0.33
SHMT2-203ENST00000449049 GCM2O75603 506 aaPredicted RBP12.98□□□□□ -0.33
SHMT2-203ENST00000449049 PGM3O95394 542 aa12.98□□□□□ -0.33
SHMT2-203ENST00000449049 ZIC2O95409 532 aaPredicted RBP12.98□□□□□ -0.33
SHMT2-203ENST00000449049 H6PDO95479 791 aa12.98□□□□□ -0.33
SHMT2-203ENST00000449049 NADKO95544 446 aaPredicted RBP12.98□□□□□ -0.33
SHMT2-203ENST00000449049 PRKAR1AP10644 381 aa12.98□□□□□ -0.33
SHMT2-203ENST00000449049 NCK1P16333 377 aa12.98□□□□□ -0.33
SHMT2-203ENST00000449049 CCNJQ5T5M9 372 aa12.98□□□□□ -0.33
SHMT2-203ENST00000449049 LCN8Q6JVE9 175 aa12.98□□□□□ -0.33
SHMT2-203ENST00000449049 TCTN3Q6NUS6 607 aa12.98□□□□□ -0.33
SHMT2-203ENST00000449049 JMJD6Q6NYC1 403 aaPredicted RBP12.98□□□□□ -0.33
SHMT2-203ENST00000449049 CCDC80Q76M96 950 aa12.98□□□□□ -0.33
SHMT2-203ENST00000449049 TMEM102Q8N9M5 508 aaPredicted RBP12.98□□□□□ -0.33
SHMT2-203ENST00000449049 FAM13CQ8NE31 585 aa12.98□□□□□ -0.33
SHMT2-203ENST00000449049 BBS10Q8TAM1 723 aa12.98□□□□□ -0.33
SHMT2-203ENST00000449049 THAP3Q8WTV1 239 aaPredicted RBP12.98□□□□□ -0.33
SHMT2-203ENST00000449049 LMF1Q96S06 567 aa12.98□□□□□ -0.33
SHMT2-203ENST00000449049 TREX2Q9BQ50 279 aaPredicted RBP12.98□□□□□ -0.33
SHMT2-203ENST00000449049 SAP130Q9H0E3 1048 aa12.98□□□□□ -0.33
SHMT2-203ENST00000449049 SLC38A1Q9H2H9 487 aa12.98□□□□□ -0.33
SHMT2-203ENST00000449049 GORASP2Q9H8Y8 452 aa12.98□□□□□ -0.33
SHMT2-203ENST00000449049 LIN28AQ9H9Z2 209 aaKnown RBP12.98□□□□□ -0.33
SHMT2-203ENST00000449049 ATP13A2Q9NQ11 1180 aa12.98□□□□□ -0.33
SHMT2-203ENST00000449049 POLE3Q9NRF9 147 aa12.98□□□□□ -0.33
SHMT2-203ENST00000449049 A0A0G2JPF8 293 aa12.97□□□□□ -0.33
SHMT2-203ENST00000449049 MED19A0JLT2 244 aaPredicted RBP12.97□□□□□ -0.33
SHMT2-203ENST00000449049 HNRNPCL2B2RXH8 293 aa12.97□□□□□ -0.33
SHMT2-203ENST00000449049 HNRNPCL3B7ZW38 293 aa12.97□□□□□ -0.33
SHMT2-203ENST00000449049 STX11O75558 287 aa12.97□□□□□ -0.33
SHMT2-203ENST00000449049 CIB2O75838 187 aa12.97□□□□□ -0.33
SHMT2-203ENST00000449049 IGKV1D-16P01601 117 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms