RNA–Protein interactions for RNA: ENST00000448905.6

HMGB3-204, Transcript of high mobility group box 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGB3, Length 812 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-204ENST00000448905 C8orf74Q6P047 294 aa12.03□□□□□ -0.48
HMGB3-204ENST00000448905 RELL1Q8IUW5 271 aa12.03□□□□□ -0.48
HMGB3-204ENST00000448905 UBQLNLQ8IYU4 475 aa12.03□□□□□ -0.48
HMGB3-204ENST00000448905 SIMC1Q8NDZ2 872 aa12.03□□□□□ -0.48
HMGB3-204ENST00000448905 METTL6Q8TCB7 284 aa12.03□□□□□ -0.48
HMGB3-204ENST00000448905 ZNF483Q8TF39 744 aaPredicted RBP12.03□□□□□ -0.48
HMGB3-204ENST00000448905 ZNF592Q92610 1267 aa12.03□□□□□ -0.48
HMGB3-204ENST00000448905 STARD4Q96DR4 205 aa12.03□□□□□ -0.48
HMGB3-204ENST00000448905 MTBPQ96DY7 904 aa12.03□□□□□ -0.48
HMGB3-204ENST00000448905 BBS4Q96RK4 519 aa12.03□□□□□ -0.48
HMGB3-204ENST00000448905 G6PC3Q9BUM1 346 aa12.03□□□□□ -0.48
HMGB3-204ENST00000448905 HHATLQ9HCP6 504 aa12.03□□□□□ -0.48
HMGB3-204ENST00000448905 FANCFQ9NPI8 374 aa12.03□□□□□ -0.48
HMGB3-204ENST00000448905 KLHL28Q9NXS3 571 aa12.03□□□□□ -0.48
HMGB3-204ENST00000448905 C6orf203Q9P0P8 240 aaPredicted RBP12.03□□□□□ -0.48
HMGB3-204ENST00000448905 PPP4R1LQ9P1A2 415 aa12.03□□□□□ -0.48
HMGB3-204ENST00000448905 STK38LQ9Y2H1 464 aa12.03□□□□□ -0.48
HMGB3-204ENST00000448905 TESMINQ9Y4I5 508 aa12.03□□□□□ -0.48
HMGB3-204ENST00000448905 ESYT3A0FGR9 886 aa12.02□□□□□ -0.49
HMGB3-204ENST00000448905 MANBAO00462 879 aa12.02□□□□□ -0.49
HMGB3-204ENST00000448905 HCRTR2O43614 444 aa12.02□□□□□ -0.49
HMGB3-204ENST00000448905 PLOD3O60568 738 aa12.02□□□□□ -0.49
HMGB3-204ENST00000448905 TSPAN2O60636 221 aa12.02□□□□□ -0.49
HMGB3-204ENST00000448905 COQ9O75208 318 aa12.02□□□□□ -0.49
HMGB3-204ENST00000448905 SUPT7LO94864 414 aa12.02□□□□□ -0.49
HMGB3-204ENST00000448905 POU2F1P14859 743 aa12.02□□□□□ -0.49
HMGB3-204ENST00000448905 TSPAN8P19075 237 aa12.02□□□□□ -0.49
HMGB3-204ENST00000448905 HMOX2P30519 316 aa12.02□□□□□ -0.49
HMGB3-204ENST00000448905 PSMD4P55036 377 aaKnown RBP12.02□□□□□ -0.49
HMGB3-204ENST00000448905 RPS3AP61247 264 aaKnown RBP12.02□□□□□ -0.49
HMGB3-204ENST00000448905 ETF1P62495 437 aaKnown RBP12.02□□□□□ -0.49
HMGB3-204ENST00000448905 CKAP4Q07065 602 aaKnown RBP12.02□□□□□ -0.49
HMGB3-204ENST00000448905 ACSM2AQ08AH3 577 aa12.02□□□□□ -0.49
HMGB3-204ENST00000448905 GANABQ14697 944 aaKnown RBP12.02□□□□□ -0.49
HMGB3-204ENST00000448905 SGCBQ16585 318 aa12.02□□□□□ -0.49
HMGB3-204ENST00000448905 CYP27C1Q4G0S4 372 aa12.02□□□□□ -0.49
HMGB3-204ENST00000448905 SPIN4Q56A73 249 aa12.02□□□□□ -0.49
HMGB3-204ENST00000448905 ZNF628Q5EBL2 1059 aa12.02□□□□□ -0.49
HMGB3-204ENST00000448905 Q5PR19 223 aa12.02□□□□□ -0.49
HMGB3-204ENST00000448905 ACSM2BQ68CK6 577 aa12.02□□□□□ -0.49
HMGB3-204ENST00000448905 FAM180BQ6P0A1 224 aa12.02□□□□□ -0.49
HMGB3-204ENST00000448905 LETMD1Q6P1Q0 360 aa12.02□□□□□ -0.49
HMGB3-204ENST00000448905 CXorf67Q86X51 503 aaPredicted RBP12.02□□□□□ -0.49
HMGB3-204ENST00000448905 CDYL2Q8N8U2 506 aa12.02□□□□□ -0.49
HMGB3-204ENST00000448905 KAT2AQ92830 837 aa12.02□□□□□ -0.49
HMGB3-204ENST00000448905 GFM2Q969S9 779 aaKnown RBP12.02□□□□□ -0.49
HMGB3-204ENST00000448905 EXOSC8Q96B26 276 aaKnown RBP12.02□□□□□ -0.49
HMGB3-204ENST00000448905 PIK3IP1Q96FE7 263 aa12.02□□□□□ -0.49
HMGB3-204ENST00000448905 ZNF845Q96IR2 970 aaPredicted RBP12.02□□□□□ -0.49
HMGB3-204ENST00000448905 VSTM2LQ96N03 204 aa12.02□□□□□ -0.49
HMGB3-204ENST00000448905 CCL19Q99731 98 aa12.02□□□□□ -0.49
HMGB3-204ENST00000448905 PIGQQ9BRB3 760 aa12.02□□□□□ -0.49
HMGB3-204ENST00000448905 C1QTNF3Q9BXJ4 246 aa12.02□□□□□ -0.49
HMGB3-204ENST00000448905 DSN1Q9H410 356 aa12.02□□□□□ -0.49
HMGB3-204ENST00000448905 SLC35C2Q9NQQ7 365 aa12.02□□□□□ -0.49
HMGB3-204ENST00000448905 ZDHHC18Q9NUE0 388 aa12.02□□□□□ -0.49
HMGB3-204ENST00000448905 NINJ2Q9NZG7 142 aa12.02□□□□□ -0.49
HMGB3-204ENST00000448905 PYCARDQ9ULZ3 195 aa12.02□□□□□ -0.49
HMGB3-204ENST00000448905 AKAP6Q13023 2319 aa12.02□□□□□ -0.49
HMGB3-204ENST00000448905 A0A1B0GTL3 188 aa12.01□□□□□ -0.49
HMGB3-204ENST00000448905 A8MT66 165 aa12.01□□□□□ -0.49
HMGB3-204ENST00000448905 POC1B-GALNT4F8VUJ3 575 aa12.01□□□□□ -0.49
HMGB3-204ENST00000448905 PPP6CO00743 305 aa12.01□□□□□ -0.49
HMGB3-204ENST00000448905 EMC8O43402 210 aa12.01□□□□□ -0.49
HMGB3-204ENST00000448905 PCDH7O60245 1069 aa12.01□□□□□ -0.49
HMGB3-204ENST00000448905 SLITRK5O94991 958 aa12.01□□□□□ -0.49
HMGB3-204ENST00000448905 OR4F21O95013 312 aa12.01□□□□□ -0.49
HMGB3-204ENST00000448905 LY6G6DO95868 133 aa12.01□□□□□ -0.49
HMGB3-204ENST00000448905 IL3P08700 152 aa12.01□□□□□ -0.49
HMGB3-204ENST00000448905 RPS17P08708 135 aaKnown RBP12.01□□□□□ -0.49
HMGB3-204ENST00000448905 SNRPAP09012 282 aaKnown RBP12.01□□□□□ -0.49
HMGB3-204ENST00000448905 HK1P19367 917 aa12.01□□□□□ -0.49
HMGB3-204ENST00000448905 CRYGSP22914 178 aa12.01□□□□□ -0.49
HMGB3-204ENST00000448905 TCEA1P23193 301 aaKnown RBP12.01□□□□□ -0.49
HMGB3-204ENST00000448905 UGT2B10P36537 528 aa12.01□□□□□ -0.49
HMGB3-204ENST00000448905 MAGEA12P43365 314 aa12.01□□□□□ -0.49
HMGB3-204ENST00000448905 CORO7P57737 925 aa12.01□□□□□ -0.49
HMGB3-204ENST00000448905 OCRLQ01968 901 aa12.01□□□□□ -0.49
HMGB3-204ENST00000448905 ZNHIT3Q15649 155 aaPredicted RBP12.01□□□□□ -0.49
HMGB3-204ENST00000448905 DECR1Q16698 335 aa12.01□□□□□ -0.49
HMGB3-204ENST00000448905 GLYR1Q49A26 553 aaPredicted RBP12.01□□□□□ -0.49
HMGB3-204ENST00000448905 RAET1LQ5VY80 246 aa12.01□□□□□ -0.49
HMGB3-204ENST00000448905 PLXDC2Q6UX71 529 aa12.01□□□□□ -0.49
HMGB3-204ENST00000448905 SYT10Q6XYQ8 523 aa12.01□□□□□ -0.49
HMGB3-204ENST00000448905 C20orf204Q6ZNR8 217 aa12.01□□□□□ -0.49
HMGB3-204ENST00000448905 GPRIN3Q6ZVF9 776 aa12.01□□□□□ -0.49
HMGB3-204ENST00000448905 BTLAQ7Z6A9 289 aa12.01□□□□□ -0.49
HMGB3-204ENST00000448905 FAM9CQ8IZT9 166 aa12.01□□□□□ -0.49
HMGB3-204ENST00000448905 OR9A2Q8NGT5 310 aa12.01□□□□□ -0.49
HMGB3-204ENST00000448905 UHMK1Q8TAS1 419 aaKnown RBP12.01□□□□□ -0.49
HMGB3-204ENST00000448905 EFHD2Q96C19 240 aaPredicted RBP12.01□□□□□ -0.49
HMGB3-204ENST00000448905 FUT8Q9BYC5 575 aa12.01□□□□□ -0.49
HMGB3-204ENST00000448905 PRRG4Q9BZD6 226 aa12.01□□□□□ -0.49
HMGB3-204ENST00000448905 UBTD1Q9HAC8 227 aa12.01□□□□□ -0.49
HMGB3-204ENST00000448905 FOLH1BQ9HBA9 442 aa12.01□□□□□ -0.49
HMGB3-204ENST00000448905 HEY2Q9UBP5 337 aa12.01□□□□□ -0.49
HMGB3-204ENST00000448905 ZNF180Q9UJW8 692 aa12.01□□□□□ -0.49
HMGB3-204ENST00000448905 ZNF175Q9Y473 711 aa12.01□□□□□ -0.49
HMGB3-204ENST00000448905 ARHGAP21Q5T5U3 1957 aa12.01□□□□□ -0.49
HMGB3-204ENST00000448905 ANXA4P09525 319 aaPredicted RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms