RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 VPS13CQ709C8 3753 aa25.64■■□□□ 1.7
CBX4-202ENST00000448310 PLOD2O00469 737 aa25.64■■□□□ 1.7
CBX4-202ENST00000448310 GRK2P25098 689 aa25.64■■□□□ 1.7
CBX4-202ENST00000448310 CPA2P48052 419 aa25.64■■□□□ 1.7
CBX4-202ENST00000448310 CLDN18P56856 261 aa25.64■■□□□ 1.7
CBX4-202ENST00000448310 LCP2Q13094 533 aa25.64■■□□□ 1.7
CBX4-202ENST00000448310 PRSS53Q2L4Q9 553 aa25.64■■□□□ 1.7
CBX4-202ENST00000448310 SAMD14Q8IZD0 417 aaPredicted RBP25.64■■□□□ 1.7
CBX4-202ENST00000448310 FAM9CQ8IZT9 166 aa25.64■■□□□ 1.7
CBX4-202ENST00000448310 WNT2BQ93097 391 aa25.64■■□□□ 1.7
CBX4-202ENST00000448310 ALPK1Q96QP1 1244 aa25.64■■□□□ 1.7
CBX4-202ENST00000448310 YIPF4Q9BSR8 244 aa25.64■■□□□ 1.7
CBX4-202ENST00000448310 RAF1P04049 648 aa25.63■■□□□ 1.69
CBX4-202ENST00000448310 ENO1P06733 434 aaKnown RBP25.63■■□□□ 1.69
CBX4-202ENST00000448310 ANXA4P09525 319 aaPredicted RBP25.63■■□□□ 1.69
CBX4-202ENST00000448310 GAS1P54826 345 aa25.63■■□□□ 1.69
CBX4-202ENST00000448310 ZNF155Q12901 538 aaPredicted RBP25.63■■□□□ 1.69
CBX4-202ENST00000448310 AAGABQ6PD74 315 aa25.63■■□□□ 1.69
CBX4-202ENST00000448310 SLC22A9Q8IVM8 553 aa25.63■■□□□ 1.69
CBX4-202ENST00000448310 RNF138Q8WVD3 245 aa25.63■■□□□ 1.69
CBX4-202ENST00000448310 L3HYPDHQ96EM0 354 aa25.63■■□□□ 1.69
CBX4-202ENST00000448310 C11orf24Q96F05 449 aaPredicted RBP25.63■■□□□ 1.69
CBX4-202ENST00000448310 ZFP3Q96NJ6 502 aa25.63■■□□□ 1.69
CBX4-202ENST00000448310 BBS4Q96RK4 519 aa25.63■■□□□ 1.69
CBX4-202ENST00000448310 UCN2Q96RP3 112 aa25.63■■□□□ 1.69
CBX4-202ENST00000448310 GSTO2Q9H4Y5 243 aa25.63■■□□□ 1.69
CBX4-202ENST00000448310 OR10H1Q9Y4A9 318 aa25.63■■□□□ 1.69
CBX4-202ENST00000448310 ZIC3O60481 467 aa25.62■■□□□ 1.69
CBX4-202ENST00000448310 PLOD3O60568 738 aa25.62■■□□□ 1.69
CBX4-202ENST00000448310 ATE1O95260 518 aa25.62■■□□□ 1.69
CBX4-202ENST00000448310 ZNF708P17019 499 aa25.62■■□□□ 1.69
CBX4-202ENST00000448310 DPP4P27487 766 aa25.62■■□□□ 1.69
CBX4-202ENST00000448310 PNLIPRP2P54317 469 aa25.62■■□□□ 1.69
CBX4-202ENST00000448310 FOXA1P55317 472 aa25.62■■□□□ 1.69
CBX4-202ENST00000448310 PKNOX1P55347 436 aa25.62■■□□□ 1.69
CBX4-202ENST00000448310 SPDYAQ5MJ70 313 aa25.62■■□□□ 1.69
CBX4-202ENST00000448310 SH2D4BQ5SQS7 431 aa25.62■■□□□ 1.69
CBX4-202ENST00000448310 GALNT18Q6P9A2 607 aa25.62■■□□□ 1.69
CBX4-202ENST00000448310 LCA5Q86VQ0 697 aa25.62■■□□□ 1.69
CBX4-202ENST00000448310 GRAMD2AQ8IUY3 354 aa25.62■■□□□ 1.69
CBX4-202ENST00000448310 MBD6Q96DN6 1003 aa25.62■■□□□ 1.69
CBX4-202ENST00000448310 POM121Q96HA1 1249 aa25.62■■□□□ 1.69
CBX4-202ENST00000448310 PLEKHF2Q9H8W4 249 aa25.62■■□□□ 1.69
CBX4-202ENST00000448310 MID1IP1Q9NPA3 183 aa25.62■■□□□ 1.69
CBX4-202ENST00000448310 STK38LQ9Y2H1 464 aa25.62■■□□□ 1.69
CBX4-202ENST00000448310 NAV3Q8IVL0 2385 aa25.61■■□□□ 1.69
CBX4-202ENST00000448310 RIPK2O43353 540 aa25.61■■□□□ 1.69
CBX4-202ENST00000448310 SCO2O43819 266 aa25.61■■□□□ 1.69
CBX4-202ENST00000448310 TGM6O95932 706 aa25.61■■□□□ 1.69
CBX4-202ENST00000448310 JUNP05412 331 aaKnown RBP25.61■■□□□ 1.69
CBX4-202ENST00000448310 PYGBP11216 843 aa25.61■■□□□ 1.69
CBX4-202ENST00000448310 MPIP34949 423 aa25.61■■□□□ 1.69
CBX4-202ENST00000448310 C2orf80Q0P641 193 aa25.61■■□□□ 1.69
CBX4-202ENST00000448310 KEAP1Q14145 624 aa25.61■■□□□ 1.69
CBX4-202ENST00000448310 OR4K17Q8NGC6 315 aa25.61■■□□□ 1.69
CBX4-202ENST00000448310 TAS2R9Q9NYW1 312 aa25.61■■□□□ 1.69
CBX4-202ENST00000448310 NIPBLQ6KC79 2804 aaeCLIP25.6■■□□□ 1.69
CBX4-202ENST00000448310 UBFD1O14562 309 aaKnown RBP25.6■■□□□ 1.69
CBX4-202ENST00000448310 MC3RP41968 323 aa25.6■■□□□ 1.69
CBX4-202ENST00000448310 B3GALT5-AS1P59052 145 aa25.6■■□□□ 1.69
CBX4-202ENST00000448310 ADAM8P78325 824 aa25.6■■□□□ 1.69
CBX4-202ENST00000448310 PSG6Q00889 435 aa25.6■■□□□ 1.69
CBX4-202ENST00000448310 TRMT10CQ7L0Y3 403 aaKnown RBP25.6■■□□□ 1.69
CBX4-202ENST00000448310 CAMKMTQ7Z624 323 aa25.6■■□□□ 1.69
CBX4-202ENST00000448310 CCNYL1Q8N7R7 359 aa25.6■■□□□ 1.69
CBX4-202ENST00000448310 DSN1Q9H410 356 aa25.6■■□□□ 1.69
CBX4-202ENST00000448310 FLRT3Q9NZU0 649 aa25.6■■□□□ 1.69
CBX4-202ENST00000448310 PPP4R1LQ9P1A2 415 aa25.6■■□□□ 1.69
CBX4-202ENST00000448310 MRPS18CQ9Y3D5 142 aaKnown RBP25.6■■□□□ 1.69
CBX4-202ENST00000448310 TNFSF12-TNFSF13A0A0A6YY99 330 aa25.59■■□□□ 1.69
CBX4-202ENST00000448310 A0A1W2PPR1 153 aa25.59■■□□□ 1.69
CBX4-202ENST00000448310 SH3D21A4FU49 640 aa25.59■■□□□ 1.69
CBX4-202ENST00000448310 MYO1GB0I1T2 1018 aa25.59■■□□□ 1.69
CBX4-202ENST00000448310 TNFSF13O75888 250 aa25.59■■□□□ 1.69
CBX4-202ENST00000448310 HRGP04196 525 aa25.59■■□□□ 1.69
CBX4-202ENST00000448310 DDCP20711 480 aa25.59■■□□□ 1.69
CBX4-202ENST00000448310 CHMP24386 653 aa25.59■■□□□ 1.69
CBX4-202ENST00000448310 EVI2BP34910 448 aa25.59■■□□□ 1.69
CBX4-202ENST00000448310 CPOXP36551 454 aa25.59■■□□□ 1.69
CBX4-202ENST00000448310 NCBP2P52298 156 aaKnown RBP eCLIP25.59■■□□□ 1.693e-8■□□□□ 10.1
CBX4-202ENST00000448310 ZNF763Q0D2J5 394 aa25.59■■□□□ 1.69
CBX4-202ENST00000448310 DEFB113Q30KQ7 82 aa25.59■■□□□ 1.69
CBX4-202ENST00000448310 TMEM107Q6UX40 140 aa25.59■■□□□ 1.69
CBX4-202ENST00000448310 UBQLNLQ8IYU4 475 aa25.59■■□□□ 1.69
CBX4-202ENST00000448310 DTNBP1Q96EV8 351 aa25.59■■□□□ 1.69
CBX4-202ENST00000448310 DACH2Q96NX9 599 aa25.59■■□□□ 1.69
CBX4-202ENST00000448310 STMN4Q9H169 189 aaPredicted RBP25.59■■□□□ 1.69
CBX4-202ENST00000448310 ACBD3Q9H3P7 528 aa25.59■■□□□ 1.69
CBX4-202ENST00000448310 GSX1Q9H4S2 264 aaPredicted RBP25.59■■□□□ 1.69
CBX4-202ENST00000448310 SIRT5Q9NXA8 310 aa25.59■■□□□ 1.69
CBX4-202ENST00000448310 TBK1Q9UHD2 729 aa25.59■■□□□ 1.69
CBX4-202ENST00000448310 EMCNQ9ULC0 261 aa25.59■■□□□ 1.69
CBX4-202ENST00000448310 CCDC151A5D8V7 595 aa25.58■■□□□ 1.69
CBX4-202ENST00000448310 HCRTR2O43614 444 aa25.58■■□□□ 1.69
CBX4-202ENST00000448310 COQ9O75208 318 aa25.58■■□□□ 1.69
CBX4-202ENST00000448310 PSPHP78330 225 aa25.58■■□□□ 1.69
CBX4-202ENST00000448310 STX5Q13190 355 aa25.58■■□□□ 1.69
CBX4-202ENST00000448310 GAB1Q13480 694 aa25.58■■□□□ 1.69
CBX4-202ENST00000448310 P4HA3Q7Z4N8 544 aa25.58■■□□□ 1.69
CBX4-202ENST00000448310 MZB1Q8WU39 189 aa25.58■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms