RNA–Protein interactions for RNA: ENST00000448116.6

SHC1-210, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-210ENST00000448116 BBS10Q8TAM1 723 aa12.12□□□□□ -0.47
SHC1-210ENST00000448116 WFIKKN2Q8TEU8 576 aa12.12□□□□□ -0.47
SHC1-210ENST00000448116 ZFPM2Q8WW38 1151 aa12.12□□□□□ -0.47
SHC1-210ENST00000448116 SLC7A6Q92536 515 aa12.12□□□□□ -0.47
SHC1-210ENST00000448116 AP3S1Q92572 193 aa12.12□□□□□ -0.47
SHC1-210ENST00000448116 RSPRY1Q96DX4 576 aa12.12□□□□□ -0.47
SHC1-210ENST00000448116 GFM1Q96RP9 751 aaKnown RBP12.12□□□□□ -0.47
SHC1-210ENST00000448116 DCLRE1CQ96SD1 692 aaKnown RBP12.12□□□□□ -0.47
SHC1-210ENST00000448116 TBX5Q99593 518 aa12.12□□□□□ -0.47
SHC1-210ENST00000448116 CSNK1G3Q9Y6M4 447 aa12.12□□□□□ -0.47
SHC1-210ENST00000448116 NOTCH4Q99466 2003 aa12.12□□□□□ -0.47
SHC1-210ENST00000448116 A0A1W2PPV9 198 aa12.12□□□□□ -0.47
SHC1-210ENST00000448116 A0A1W2PR48 441 aa12.12□□□□□ -0.47
SHC1-210ENST00000448116 LRIT2A6NDA9 550 aa12.12□□□□□ -0.47
SHC1-210ENST00000448116 FAM183AA6NL82 134 aa12.12□□□□□ -0.47
SHC1-210ENST00000448116 OR52A4PA6NMU1 304 aa12.12□□□□□ -0.47
SHC1-210ENST00000448116 FAM25AB3EWG3 89 aa12.12□□□□□ -0.47
SHC1-210ENST00000448116 FAM25CB3EWG5 89 aa12.12□□□□□ -0.47
SHC1-210ENST00000448116 FAM25GB3EWG6 89 aa12.12□□□□□ -0.47
SHC1-210ENST00000448116 PAK4O96013 591 aaPredicted RBP12.12□□□□□ -0.47
SHC1-210ENST00000448116 LIMS3P0CW19 117 aa12.12□□□□□ -0.47
SHC1-210ENST00000448116 LIMS4P0CW20 117 aa12.12□□□□□ -0.47
SHC1-210ENST00000448116 CDK3Q00526 305 aa12.12□□□□□ -0.47
SHC1-210ENST00000448116 DPTQ07507 201 aa12.12□□□□□ -0.47
SHC1-210ENST00000448116 HSDL2Q6YN16 418 aa12.12□□□□□ -0.47
SHC1-210ENST00000448116 ZNF765Q7L2R6 523 aa12.12□□□□□ -0.47
SHC1-210ENST00000448116 C16orf62Q7Z3J2 963 aa12.12□□□□□ -0.47
SHC1-210ENST00000448116 GDPD1Q8N9F7 314 aa12.12□□□□□ -0.47
SHC1-210ENST00000448116 CHAC2Q8WUX2 184 aa12.12□□□□□ -0.47
SHC1-210ENST00000448116 TOX2Q96NM4 488 aa12.12□□□□□ -0.47
SHC1-210ENST00000448116 TMEM245Q9H330 911 aa12.12□□□□□ -0.47
SHC1-210ENST00000448116 DDX31Q9H8H2 851 aaKnown RBP12.12□□□□□ -0.47
SHC1-210ENST00000448116 WASH6PQ9NQA3 447 aa12.12□□□□□ -0.47
SHC1-210ENST00000448116 PAK6Q9NQU5 681 aaPredicted RBP12.12□□□□□ -0.47
SHC1-210ENST00000448116 SEMA4GQ9NTN9 838 aa12.12□□□□□ -0.47
SHC1-210ENST00000448116 H2AFY2Q9P0M6 372 aaPredicted RBP12.12□□□□□ -0.47
SHC1-210ENST00000448116 NLKQ9UBE8 527 aa12.12□□□□□ -0.47
SHC1-210ENST00000448116 DENND4CQ5VZ89 1909 aa12.12□□□□□ -0.47
SHC1-210ENST00000448116 FAM240BA0A1B0GVZ2 78 aa12.12□□□□□ -0.47
SHC1-210ENST00000448116 ANKRD34BA5PLL1 514 aa12.12□□□□□ -0.47
SHC1-210ENST00000448116 PLA2G10O15496 165 aa12.12□□□□□ -0.47
SHC1-210ENST00000448116 UBXN7O94888 489 aa12.12□□□□□ -0.47
SHC1-210ENST00000448116 PAHP00439 452 aa12.12□□□□□ -0.47
SHC1-210ENST00000448116 GSTM3P21266 225 aa12.12□□□□□ -0.47
SHC1-210ENST00000448116 MC3RP41968 323 aa12.12□□□□□ -0.47
SHC1-210ENST00000448116 TGM3Q08188 693 aa12.12□□□□□ -0.47
SHC1-210ENST00000448116 FUT5Q11128 374 aa12.12□□□□□ -0.47
SHC1-210ENST00000448116 RAB40BQ12829 278 aa12.12□□□□□ -0.47
SHC1-210ENST00000448116 CDK10Q15131 360 aa12.12□□□□□ -0.47
SHC1-210ENST00000448116 SLC35F1Q5T1Q4 408 aa12.12□□□□□ -0.47
SHC1-210ENST00000448116 METRNLQ641Q3 311 aa12.12□□□□□ -0.47
SHC1-210ENST00000448116 NKAIN4Q8IVV8 208 aa12.12□□□□□ -0.47
SHC1-210ENST00000448116 RAB42Q8N4Z0 105 aa12.12□□□□□ -0.47
SHC1-210ENST00000448116 TMEM145Q8NBT3 493 aa12.12□□□□□ -0.47
SHC1-210ENST00000448116 SUN3Q8TAQ9 357 aa12.12□□□□□ -0.47
SHC1-210ENST00000448116 CNRIP1Q96F85 164 aaPredicted RBP12.12□□□□□ -0.47
SHC1-210ENST00000448116 MSLNLQ96KJ4 702 aa12.12□□□□□ -0.47
SHC1-210ENST00000448116 INSM2Q96T92 566 aaPredicted RBP12.12□□□□□ -0.47
SHC1-210ENST00000448116 PLEKHM1Q9Y4G2 1056 aa12.12□□□□□ -0.47
SHC1-210ENST00000448116 LRRC72A6NJI9 287 aa12.11□□□□□ -0.47
SHC1-210ENST00000448116 ZSCAN5BA6NJL1 495 aa12.11□□□□□ -0.47
SHC1-210ENST00000448116 RGS13O14921 159 aa12.11□□□□□ -0.47
SHC1-210ENST00000448116 SLC2A10O95528 541 aa12.11□□□□□ -0.47
SHC1-210ENST00000448116 FGF19O95750 216 aa12.11□□□□□ -0.47
SHC1-210ENST00000448116 CERS1P27544 350 aa12.11□□□□□ -0.47
SHC1-210ENST00000448116 IFNA8P32881 189 aa12.11□□□□□ -0.47
SHC1-210ENST00000448116 EPHA5P54756 1037 aa12.11□□□□□ -0.47
SHC1-210ENST00000448116 RGS8P57771 180 aaPredicted RBP12.11□□□□□ -0.47
SHC1-210ENST00000448116 ASAH1Q13510 395 aa12.11□□□□□ -0.47
SHC1-210ENST00000448116 WSCD2Q2TBF2 565 aa12.11□□□□□ -0.47
SHC1-210ENST00000448116 ZNF57Q68EA5 555 aaPredicted RBP12.11□□□□□ -0.47
SHC1-210ENST00000448116 PLEKHM3Q6ZWE6 761 aa12.11□□□□□ -0.47
SHC1-210ENST00000448116 ACOT4Q8N9L9 421 aa12.11□□□□□ -0.47
SHC1-210ENST00000448116 TMIEQ8NEW7 156 aa12.11□□□□□ -0.47
SHC1-210ENST00000448116 BBS1Q8NFJ9 593 aa12.11□□□□□ -0.47
SHC1-210ENST00000448116 GNPDA2Q8TDQ7 276 aa12.11□□□□□ -0.47
SHC1-210ENST00000448116 AICDAQ9GZX7 198 aa12.11□□□□□ -0.47
SHC1-210ENST00000448116 PCBD2Q9H0N5 130 aa12.11□□□□□ -0.47
SHC1-210ENST00000448116 HEATR5BQ9P2D3 2071 aa12.11□□□□□ -0.47
SHC1-210ENST00000448116 TCF20Q9UGU0 1960 aaKnown RBP12.11□□□□□ -0.47
SHC1-210ENST00000448116 ALPPP05187 535 aa12.11□□□□□ -0.47
SHC1-210ENST00000448116 IFNGR2P38484 337 aa12.11□□□□□ -0.47
SHC1-210ENST00000448116 BCL6P41182 706 aa12.11□□□□□ -0.47
SHC1-210ENST00000448116 FRKP42685 505 aaPredicted RBP12.11□□□□□ -0.47
SHC1-210ENST00000448116 ANXA11P50995 505 aaKnown RBP12.11□□□□□ -0.47
SHC1-210ENST00000448116 PRDX1Q06830 199 aaKnown RBP12.11□□□□□ -0.47
SHC1-210ENST00000448116 RPA4Q13156 261 aa12.11□□□□□ -0.47
SHC1-210ENST00000448116 ARHGAP19Q14CB8 494 aa12.11□□□□□ -0.47
SHC1-210ENST00000448116 LTB4RQ15722 352 aa12.11□□□□□ -0.47
SHC1-210ENST00000448116 ZNF438Q7Z4V0 828 aa12.11□□□□□ -0.47
SHC1-210ENST00000448116 SPRED2Q7Z698 418 aa12.11□□□□□ -0.47
SHC1-210ENST00000448116 NOXA1Q86UR1 476 aa12.11□□□□□ -0.47
SHC1-210ENST00000448116 OR9A2Q8NGT5 310 aa12.11□□□□□ -0.47
SHC1-210ENST00000448116 NEIL3Q8TAT5 605 aa12.11□□□□□ -0.47
SHC1-210ENST00000448116 PIGXQ8TBF5 258 aa12.11□□□□□ -0.47
SHC1-210ENST00000448116 SECISBP2Q96T21 854 aaKnown RBP12.11□□□□□ -0.47
SHC1-210ENST00000448116 UQCC2Q9BRT2 126 aa12.11□□□□□ -0.47
SHC1-210ENST00000448116 MBNL1Q9NR56 388 aaKnown RBP12.11□□□□□ -0.47
SHC1-210ENST00000448116 TRPM6Q9BX84 2022 aa12.11□□□□□ -0.47
SHC1-210ENST00000448116 ARPC4-TTLL3A0A0A6YYG9 625 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms