RNA–Protein interactions for RNA: ENST00000446204.6

VPS8-210, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS8, Length 4,721 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-210ENST00000446204 PRELID1Q9Y255 219 aa7.56□□□□□ -1.2
VPS8-210ENST00000446204 GXYLT2A0PJZ3 443 aa7.56□□□□□ -1.2
VPS8-210ENST00000446204 ZSCAN5BA6NJL1 495 aa7.56□□□□□ -1.2
VPS8-210ENST00000446204 FAM227AF5H4B4 570 aa7.56□□□□□ -1.2
VPS8-210ENST00000446204 TRIM3O75382 744 aaPredicted RBP7.56□□□□□ -1.2
VPS8-210ENST00000446204 CSO75390 466 aaKnown RBP7.56□□□□□ -1.2
VPS8-210ENST00000446204 CLEC3AO75596 197 aa7.56□□□□□ -1.2
VPS8-210ENST00000446204 KDM4BO94953 1096 aa7.56□□□□□ -1.2
VPS8-210ENST00000446204 EPCAMP16422 314 aa7.56□□□□□ -1.2
VPS8-210ENST00000446204 LHCGRP22888 699 aa7.56□□□□□ -1.2
VPS8-210ENST00000446204 TGFBR1P36897 503 aa7.56□□□□□ -1.2
VPS8-210ENST00000446204 MC3RP41968 323 aa7.56□□□□□ -1.2
VPS8-210ENST00000446204 PYCR3Q53H96 274 aa7.56□□□□□ -1.2
VPS8-210ENST00000446204 C3orf38Q5JPI3 329 aa7.56□□□□□ -1.2
VPS8-210ENST00000446204 PHC2Q8IXK0 858 aa7.56□□□□□ -1.2
VPS8-210ENST00000446204 THEM6Q8WUY1 208 aa7.56□□□□□ -1.2
VPS8-210ENST00000446204 MSANTD3Q96H12 275 aa7.56□□□□□ -1.2
VPS8-210ENST00000446204 OR2M4Q96R27 311 aa7.56□□□□□ -1.2
VPS8-210ENST00000446204 POLDIP3Q9BY77 421 aaKnown RBP7.56□□□□□ -1.2
VPS8-210ENST00000446204 SIAEQ9HAT2 523 aa7.56□□□□□ -1.2
VPS8-210ENST00000446204 TMEFF2Q9UIK5 374 aaPredicted RBP7.56□□□□□ -1.2
VPS8-210ENST00000446204 DNMT3AQ9Y6K1 912 aaPredicted RBP7.56□□□□□ -1.2
VPS8-210ENST00000446204 HYKKA2RU49 373 aa7.55□□□□□ -1.2
VPS8-210ENST00000446204 AK1P00568 194 aa7.55□□□□□ -1.2
VPS8-210ENST00000446204 S100A9P06702 114 aaKnown RBP7.55□□□□□ -1.2
VPS8-210ENST00000446204 HNRNPA1P09651 372 aaKnown RBP eCLIP7.55□□□□□ -1.2
VPS8-210ENST00000446204 POLR2CP19387 275 aaPredicted RBP7.55□□□□□ -1.2
VPS8-210ENST00000446204 ITGB7P26010 798 aa7.55□□□□□ -1.2
VPS8-210ENST00000446204 GDI1P31150 447 aa7.55□□□□□ -1.2
VPS8-210ENST00000446204 GABRA5P31644 462 aa7.55□□□□□ -1.2
VPS8-210ENST00000446204 SOX2P48431 317 aa7.55□□□□□ -1.2
VPS8-210ENST00000446204 RNF144AP50876 292 aaPredicted RBP7.55□□□□□ -1.2
VPS8-210ENST00000446204 RPS15AP62244 130 aaKnown RBP7.55□□□□□ -1.2
VPS8-210ENST00000446204 RPS21P63220 83 aaKnown RBP7.55□□□□□ -1.2
VPS8-210ENST00000446204 TEKQ02763 1124 aa7.55□□□□□ -1.2
VPS8-210ENST00000446204 CDC20Q12834 499 aa7.55□□□□□ -1.2
VPS8-210ENST00000446204 ZNF234Q14588 700 aa7.55□□□□□ -1.2
VPS8-210ENST00000446204 SOWAHCQ53LP3 525 aaPredicted RBP7.55□□□□□ -1.2
VPS8-210ENST00000446204 PRRT3Q5FWE3 981 aa7.55□□□□□ -1.2
VPS8-210ENST00000446204 TMEM69Q5SWH9 247 aa7.55□□□□□ -1.2
VPS8-210ENST00000446204 SLX4IPQ5VYV7 408 aa7.55□□□□□ -1.2
VPS8-210ENST00000446204 FAHD1Q6P587 224 aa7.55□□□□□ -1.2
VPS8-210ENST00000446204 CALHM3Q86XJ0 350 aa7.55□□□□□ -1.2
VPS8-210ENST00000446204 OR4N5Q8IXE1 308 aa7.55□□□□□ -1.2
VPS8-210ENST00000446204 TOR1AIP2Q8NFQ8 470 aa7.55□□□□□ -1.2
VPS8-210ENST00000446204 GPER1Q99527 375 aa7.55□□□□□ -1.2
VPS8-210ENST00000446204 THAP7Q9BT49 309 aaPredicted RBP7.55□□□□□ -1.2
VPS8-210ENST00000446204 RNF167Q9H6Y7 350 aa7.55□□□□□ -1.2
VPS8-210ENST00000446204 EXO5Q9H790 373 aa7.55□□□□□ -1.2
VPS8-210ENST00000446204 DDX31Q9H8H2 851 aaKnown RBP7.55□□□□□ -1.2
VPS8-210ENST00000446204 CD93Q9NPY3 652 aa7.55□□□□□ -1.2
VPS8-210ENST00000446204 NUDT15Q9NV35 164 aa7.55□□□□□ -1.2
VPS8-210ENST00000446204 SLC7A7Q9UM01 511 aa7.55□□□□□ -1.2
VPS8-210ENST00000446204 SNX11Q9Y5W9 270 aa7.55□□□□□ -1.2
VPS8-210ENST00000446204 XIRP1Q702N8 1843 aaKnown RBP7.55□□□□□ -1.2
VPS8-210ENST00000446204 LOC102723532A0A0G2JNH3 316 aa7.55□□□□□ -1.2
VPS8-210ENST00000446204 A0A1W2PP55 124 aa7.55□□□□□ -1.2
VPS8-210ENST00000446204 GRXCR1A8MXD5 290 aa7.55□□□□□ -1.2
VPS8-210ENST00000446204 LDOC1O95751 146 aaPredicted RBP7.55□□□□□ -1.2
VPS8-210ENST00000446204 CXCR1P25024 350 aa7.55□□□□□ -1.2
VPS8-210ENST00000446204 ELAVL4P26378 380 aaKnown RBP7.55□□□□□ -1.2
VPS8-210ENST00000446204 EPHA2P29317 976 aa7.55□□□□□ -1.2
VPS8-210ENST00000446204 IGFALSP35858 605 aa7.55□□□□□ -1.2
VPS8-210ENST00000446204 MASP1P48740 699 aa7.55□□□□□ -1.2
VPS8-210ENST00000446204 SIM1P81133 766 aaPredicted RBP7.55□□□□□ -1.2
VPS8-210ENST00000446204 CRYZQ08257 329 aaKnown RBP7.55□□□□□ -1.2
VPS8-210ENST00000446204 GAS6Q14393 721 aa7.55□□□□□ -1.2
VPS8-210ENST00000446204 SF3B4Q15427 424 aaKnown RBP eCLIP7.55□□□□□ -1.21e-7■■■■□ 24.8
VPS8-210ENST00000446204 CCSMST1Q4G0I0 132 aa7.55□□□□□ -1.2
VPS8-210ENST00000446204 METAP1DQ6UB28 335 aaPredicted RBP7.55□□□□□ -1.2
VPS8-210ENST00000446204 QSOX2Q6ZRP7 698 aa7.55□□□□□ -1.2
VPS8-210ENST00000446204 NLRP8Q86W28 1048 aa7.55□□□□□ -1.2
VPS8-210ENST00000446204 ATCAYQ86WG3 371 aa7.55□□□□□ -1.2
VPS8-210ENST00000446204 KLHDC8BQ8IXV7 354 aa7.55□□□□□ -1.2
VPS8-210ENST00000446204 ZNF740Q8NDX6 193 aa7.55□□□□□ -1.2
VPS8-210ENST00000446204 SIMC1Q8NDZ2 872 aa7.55□□□□□ -1.2
VPS8-210ENST00000446204 OR5W2Q8NH69 310 aa7.55□□□□□ -1.2
VPS8-210ENST00000446204 MYLIPQ8WY64 445 aa7.55□□□□□ -1.2
VPS8-210ENST00000446204 SNAPC3Q92966 411 aa7.55□□□□□ -1.2
VPS8-210ENST00000446204 NEURL3Q96EH8 262 aa7.55□□□□□ -1.2
VPS8-210ENST00000446204 TMEM121BQ9BXQ6 578 aaPredicted RBP7.55□□□□□ -1.2
VPS8-210ENST00000446204 DPH1Q9BZG8 443 aa7.55□□□□□ -1.2
VPS8-210ENST00000446204 IFT46Q9NQC8 304 aa7.55□□□□□ -1.2
VPS8-210ENST00000446204 DIMT1Q9UNQ2 313 aaKnown RBP7.55□□□□□ -1.2
VPS8-210ENST00000446204 OR1A2Q9Y585 309 aa7.55□□□□□ -1.2
VPS8-210ENST00000446204 LRRC37AA6NMS7 1700 aa7.55□□□□□ -1.2
VPS8-210ENST00000446204 GREB1LQ9C091 1923 aaPredicted RBP7.55□□□□□ -1.2
VPS8-210ENST00000446204 TRBV5-4A0A0C4DH59 114 aa7.55□□□□□ -1.2
VPS8-210ENST00000446204 KANTRA0A1W2PQU2 76 aa7.55□□□□□ -1.2
VPS8-210ENST00000446204 FZD6O60353 706 aa7.55□□□□□ -1.2
VPS8-210ENST00000446204 ADAM23O75077 832 aa7.55□□□□□ -1.2
VPS8-210ENST00000446204 RBBP9O75884 186 aa7.55□□□□□ -1.2
VPS8-210ENST00000446204 CCL5P13501 91 aa7.55□□□□□ -1.2
VPS8-210ENST00000446204 RPS19P39019 145 aaKnown RBP7.55□□□□□ -1.2
VPS8-210ENST00000446204 SLC19A1P41440 591 aa7.55□□□□□ -1.2
VPS8-210ENST00000446204 XCR1P46094 333 aa7.55□□□□□ -1.2
VPS8-210ENST00000446204 SNRPGP62308 76 aaKnown RBP7.55□□□□□ -1.2
VPS8-210ENST00000446204 FAM71E1Q6IPT2 247 aa7.55□□□□□ -1.2
VPS8-210ENST00000446204 FIGNL1Q6PIW4 674 aa7.55□□□□□ -1.2
VPS8-210ENST00000446204 PTOV1Q86YD1 416 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms