RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 FBXO15Q8NCQ5 510 aaPredicted RBP13.13□□□□□ -0.31
VPS52-212ENST00000445902 HMGB4Q8WW32 186 aa13.13□□□□□ -0.31
VPS52-212ENST00000445902 FCRL4Q96PJ5 515 aa13.13□□□□□ -0.31
VPS52-212ENST00000445902 ERMAPQ96PL5 475 aaPredicted RBP13.13□□□□□ -0.31
VPS52-212ENST00000445902 MAN2C1Q9NTJ4 1040 aa13.13□□□□□ -0.31
VPS52-212ENST00000445902 CFAP97Q9P2B7 532 aa13.13□□□□□ -0.31
VPS52-212ENST00000445902 SCP2D1Q9UJQ7 156 aa13.13□□□□□ -0.31
VPS52-212ENST00000445902 ZC3H12DA2A288 527 aaKnown RBP13.12□□□□□ -0.31
VPS52-212ENST00000445902 AGAP14A8MT82 685 aa13.12□□□□□ -0.31
VPS52-212ENST00000445902 RTCAO00442 366 aaKnown RBP13.12□□□□□ -0.31
VPS52-212ENST00000445902 ZNF593O00488 134 aaPredicted RBP13.12□□□□□ -0.31
VPS52-212ENST00000445902 FRS3O43559 492 aa13.12□□□□□ -0.31
VPS52-212ENST00000445902 SOX30O94993 753 aa13.12□□□□□ -0.31
VPS52-212ENST00000445902 SLC2A10O95528 541 aa13.12□□□□□ -0.31
VPS52-212ENST00000445902 SP140Q13342 867 aa13.12□□□□□ -0.31
VPS52-212ENST00000445902 IKZF1Q13422 519 aa13.12□□□□□ -0.31
VPS52-212ENST00000445902 SLC25A35Q3KQZ1 300 aa13.12□□□□□ -0.31
VPS52-212ENST00000445902 SFRP4Q6FHJ7 346 aaPredicted RBP13.12□□□□□ -0.31
VPS52-212ENST00000445902 FAM71E1Q6IPT2 247 aa13.12□□□□□ -0.31
VPS52-212ENST00000445902 SLC27A4Q6P1M0 643 aa13.12□□□□□ -0.31
VPS52-212ENST00000445902 PRSS55Q6UWB4 352 aaPredicted RBP13.12□□□□□ -0.31
VPS52-212ENST00000445902 C17orf107Q6ZR85 190 aa13.12□□□□□ -0.31
VPS52-212ENST00000445902 PRSS45Q7RTY3 260 aa13.12□□□□□ -0.31
VPS52-212ENST00000445902 OAFQ86UD1 273 aa13.12□□□□□ -0.31
VPS52-212ENST00000445902 KLHL36Q8N4N3 616 aa13.12□□□□□ -0.31
VPS52-212ENST00000445902 TRMT10AQ8TBZ6 339 aaKnown RBP13.12□□□□□ -0.31
VPS52-212ENST00000445902 ELMOD3Q96FG2 381 aa13.12□□□□□ -0.31
VPS52-212ENST00000445902 WDR89Q96FK6 387 aaPredicted RBP13.12□□□□□ -0.31
VPS52-212ENST00000445902 ZNF436Q9C0F3 470 aaPredicted RBP13.12□□□□□ -0.31
VPS52-212ENST00000445902 RETREG1Q9H6L5 497 aa13.12□□□□□ -0.31
VPS52-212ENST00000445902 IFT46Q9NQC8 304 aa13.12□□□□□ -0.31
VPS52-212ENST00000445902 TDP1Q9NUW8 608 aa13.12□□□□□ -0.31
VPS52-212ENST00000445902 CHST2Q9Y4C5 530 aa13.12□□□□□ -0.31
VPS52-212ENST00000445902 B4GALT2O60909 372 aa13.12□□□□□ -0.31
VPS52-212ENST00000445902 TBXA2RP21731 343 aa13.12□□□□□ -0.31
VPS52-212ENST00000445902 UQCRC2P22695 453 aa13.12□□□□□ -0.31
VPS52-212ENST00000445902 KCNJ5P48544 419 aa13.12□□□□□ -0.31
VPS52-212ENST00000445902 MANFP55145 182 aaKnown RBP13.12□□□□□ -0.31
VPS52-212ENST00000445902 RPS7P62081 194 aaKnown RBP13.12□□□□□ -0.31
VPS52-212ENST00000445902 EFNB1P98172 346 aa13.12□□□□□ -0.31
VPS52-212ENST00000445902 DUSP6Q16828 381 aa13.12□□□□□ -0.31
VPS52-212ENST00000445902 SYTL3Q4VX76 610 aa13.12□□□□□ -0.31
VPS52-212ENST00000445902 TCTE1Q5JU00 501 aa13.12□□□□□ -0.31
VPS52-212ENST00000445902 C2orf73Q8N5S3 287 aaPredicted RBP13.12□□□□□ -0.31
VPS52-212ENST00000445902 OR6T1Q8NGN1 323 aa13.12□□□□□ -0.31
VPS52-212ENST00000445902 OR10Z1Q8NGY1 313 aa13.12□□□□□ -0.31
VPS52-212ENST00000445902 MOSPD2Q8NHP6 518 aa13.12□□□□□ -0.31
VPS52-212ENST00000445902 XAGE5Q8WWM1 108 aa13.12□□□□□ -0.31
VPS52-212ENST00000445902 CXorf40BQ96DE9 158 aa13.12□□□□□ -0.31
VPS52-212ENST00000445902 FUZQ9BT04 418 aa13.12□□□□□ -0.31
VPS52-212ENST00000445902 SHARPINQ9H0F6 387 aa13.12□□□□□ -0.31
VPS52-212ENST00000445902 SAV1Q9H4B6 383 aaPredicted RBP13.12□□□□□ -0.31
VPS52-212ENST00000445902 DDX31Q9H8H2 851 aaKnown RBP13.12□□□□□ -0.31
VPS52-212ENST00000445902 BAIAP2Q9UQB8 552 aa13.12□□□□□ -0.31
VPS52-212ENST00000445902 CSNK1G3Q9Y6M4 447 aa13.12□□□□□ -0.31
VPS52-212ENST00000445902 MYOFQ9NZM1 2061 aa13.12□□□□□ -0.31
VPS52-212ENST00000445902 LAMA2P24043 3122 aaKnown RBP13.12□□□□□ -0.31
VPS52-212ENST00000445902 ZNF840PA6NDX5 716 aa13.11□□□□□ -0.31
VPS52-212ENST00000445902 MFSD2BA6NFX1 497 aa13.11□□□□□ -0.31
VPS52-212ENST00000445902 FZD7O75084 574 aa13.11□□□□□ -0.31
VPS52-212ENST00000445902 HOXD10P28358 340 aa13.11□□□□□ -0.31
VPS52-212ENST00000445902 PDE7AQ13946 482 aa13.11□□□□□ -0.31
VPS52-212ENST00000445902 HBMQ6B0K9 141 aa13.11□□□□□ -0.31
VPS52-212ENST00000445902 SYT9Q86SS6 491 aa13.11□□□□□ -0.31
VPS52-212ENST00000445902 SERINC5Q86VE9 423 aa13.11□□□□□ -0.31
VPS52-212ENST00000445902 OR51G2Q8NGK0 314 aa13.11□□□□□ -0.31
VPS52-212ENST00000445902 BRI3BPQ8WY22 251 aa13.11□□□□□ -0.31
VPS52-212ENST00000445902 GCDHQ92947 438 aaPredicted RBP13.11□□□□□ -0.31
VPS52-212ENST00000445902 CHFRQ96EP1 664 aa13.11□□□□□ -0.31
VPS52-212ENST00000445902 FAM46AQ96IP4 442 aaKnown RBP13.11□□□□□ -0.31
VPS52-212ENST00000445902 TREX2Q9BQ50 279 aaPredicted RBP13.11□□□□□ -0.31
VPS52-212ENST00000445902 ISYNA1Q9NPH2 558 aa13.11□□□□□ -0.31
VPS52-212ENST00000445902 ADARB2Q9NS39 739 aaKnown RBP13.11□□□□□ -0.31
VPS52-212ENST00000445902 A0A1W2PPK0 400 aa13.11□□□□□ -0.31
VPS52-212ENST00000445902 SLC9B1P1A6NJY1 282 aa13.11□□□□□ -0.31
VPS52-212ENST00000445902 HMGN4O00479 90 aa13.11□□□□□ -0.31
VPS52-212ENST00000445902 MMP20O60882 483 aa13.11□□□□□ -0.31
VPS52-212ENST00000445902 EFCAB14O75071 495 aa13.11□□□□□ -0.31
VPS52-212ENST00000445902 WNT1P04628 370 aa13.11□□□□□ -0.31
VPS52-212ENST00000445902 LPLP06858 475 aa13.11□□□□□ -0.31
VPS52-212ENST00000445902 ACP5P13686 325 aa13.11□□□□□ -0.31
VPS52-212ENST00000445902 RBMS1P29558 406 aaKnown RBP13.11□□□□□ -0.31
VPS52-212ENST00000445902 THBS2P35442 1172 aa13.11□□□□□ -0.31
VPS52-212ENST00000445902 BUD31P41223 144 aaPredicted RBP13.11□□□□□ -0.31
VPS52-212ENST00000445902 SIM1P81133 766 aaPredicted RBP13.11□□□□□ -0.31
VPS52-212ENST00000445902 KCNA10Q16322 511 aa13.11□□□□□ -0.31
VPS52-212ENST00000445902 RTP2Q5QGT7 225 aa13.11□□□□□ -0.31
VPS52-212ENST00000445902 PLEKHS1Q5SXH7 462 aa13.11□□□□□ -0.31
VPS52-212ENST00000445902 CLVS2Q5SYC1 327 aa13.11□□□□□ -0.31
VPS52-212ENST00000445902 SHEQ5VZ18 495 aa13.11□□□□□ -0.31
VPS52-212ENST00000445902 ATRAIDQ6UW56 229 aa13.11□□□□□ -0.31
VPS52-212ENST00000445902 C3P1Q6ZMU1 363 aa13.11□□□□□ -0.31
VPS52-212ENST00000445902 SLCO4C1Q6ZQN7 724 aa13.11□□□□□ -0.31
VPS52-212ENST00000445902 Q6ZTK2 550 aa13.11□□□□□ -0.31
VPS52-212ENST00000445902 DEFB132Q7Z7B7 95 aa13.11□□□□□ -0.31
VPS52-212ENST00000445902 LINC00518Q8N0U6 118 aa13.11□□□□□ -0.31
VPS52-212ENST00000445902 TRPV1Q8NER1 839 aa13.11□□□□□ -0.31
VPS52-212ENST00000445902 ASZ1Q8WWH4 475 aa13.11□□□□□ -0.31
VPS52-212ENST00000445902 QRSL1Q9H0R6 528 aaKnown RBP13.11□□□□□ -0.31
VPS52-212ENST00000445902 PTTG3PQ9NZH4 202 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms