RNA–Protein interactions for RNA: ENST00000445866.6

SGCE-206, Transcript of sarcoglycan epsilon, humanhuman

TSL 5 BASIC

Gene SGCE, Length 1,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-206ENST00000445866 MRPS22P82650 360 aaKnown RBP16.08■□□□□ 0.16
SGCE-206ENST00000445866 GPAT3Q53EU6 434 aa16.08■□□□□ 0.16
SGCE-206ENST00000445866 SAMD4BQ5PRF9 694 aaKnown RBP16.08■□□□□ 0.16
SGCE-206ENST00000445866 ABHD17BQ5VST6 288 aa16.08■□□□□ 0.16
SGCE-206ENST00000445866 AGAP7PQ5VUJ5 663 aa16.08■□□□□ 0.16
SGCE-206ENST00000445866 FIGNL1Q6PIW4 674 aa16.08■□□□□ 0.16
SGCE-206ENST00000445866 GALNT10Q86SR1 603 aa16.08■□□□□ 0.16
SGCE-206ENST00000445866 CALHM3Q86XJ0 350 aa16.08■□□□□ 0.16
SGCE-206ENST00000445866 BCORP1Q8N888 145 aa16.08■□□□□ 0.16
SGCE-206ENST00000445866 SLC22A8Q8TCC7 542 aa16.08■□□□□ 0.16
SGCE-206ENST00000445866 SLC38A5Q8WUX1 472 aa16.08■□□□□ 0.16
SGCE-206ENST00000445866 TMBIM1Q969X1 311 aa16.08■□□□□ 0.16
SGCE-206ENST00000445866 AGAP4Q96P64 663 aa16.08■□□□□ 0.16
SGCE-206ENST00000445866 ZBTB20Q9HC78 741 aaPredicted RBP16.08■□□□□ 0.16
SGCE-206ENST00000445866 GPR83Q9NYM4 423 aa16.08■□□□□ 0.16
SGCE-206ENST00000445866 GMPR2Q9P2T1 348 aaKnown RBP16.08■□□□□ 0.16
SGCE-206ENST00000445866 ABCD2Q9UBJ2 740 aa16.08■□□□□ 0.16
SGCE-206ENST00000445866 MRTO4Q9UKD2 239 aaKnown RBP16.08■□□□□ 0.16
SGCE-206ENST00000445866 NPFFR2Q9Y5X5 522 aa16.08■□□□□ 0.16
SGCE-206ENST00000445866 PRAMEF27A3QJZ7 478 aa16.07■□□□□ 0.16
SGCE-206ENST00000445866 C5orf58C9J3I9 102 aa16.07■□□□□ 0.16
SGCE-206ENST00000445866 DNAJC8O75937 253 aaPredicted RBP16.07■□□□□ 0.16
SGCE-206ENST00000445866 ABCD3P28288 659 aa16.07■□□□□ 0.16
SGCE-206ENST00000445866 PGM1P36871 562 aa16.07■□□□□ 0.16
SGCE-206ENST00000445866 GSK3BP49841 420 aa16.07■□□□□ 0.16
SGCE-206ENST00000445866 PLCXD2Q0VAA5 305 aa16.07■□□□□ 0.16
SGCE-206ENST00000445866 SYPL1Q16563 259 aa16.07■□□□□ 0.16
SGCE-206ENST00000445866 ARHGAP11BQ3KRB8 267 aa16.07■□□□□ 0.16
SGCE-206ENST00000445866 CCNJQ5T5M9 372 aa16.07■□□□□ 0.16
SGCE-206ENST00000445866 YTHDF3Q7Z739 585 aaKnown RBP16.07■□□□□ 0.16
SGCE-206ENST00000445866 ARMC10Q8N2F6 343 aa16.07■□□□□ 0.16
SGCE-206ENST00000445866 SLC15A4Q8N697 577 aa16.07■□□□□ 0.16
SGCE-206ENST00000445866 ANKFN1Q8N957 763 aa16.07■□□□□ 0.16
SGCE-206ENST00000445866 C11orf65Q8NCR3 313 aa16.07■□□□□ 0.16
SGCE-206ENST00000445866 OR2T12Q8NG77 320 aa16.07■□□□□ 0.16
SGCE-206ENST00000445866 TRNT1Q96Q11 434 aaKnown RBP16.07■□□□□ 0.16
SGCE-206ENST00000445866 LMF1Q96S06 567 aa16.07■□□□□ 0.16
SGCE-206ENST00000445866 RASL10BQ96S79 203 aa16.07■□□□□ 0.16
SGCE-206ENST00000445866 SDF2Q99470 211 aa16.07■□□□□ 0.16
SGCE-206ENST00000445866 KCTD14Q9BQ13 255 aaPredicted RBP16.07■□□□□ 0.16
SGCE-206ENST00000445866 TMEM38AQ9H6F2 299 aa16.07■□□□□ 0.16
SGCE-206ENST00000445866 A4GALTQ9NPC4 353 aa16.07■□□□□ 0.16
SGCE-206ENST00000445866 P2RX2Q9UBL9 471 aa16.07■□□□□ 0.16
SGCE-206ENST00000445866 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.07■□□□□ 0.16
SGCE-206ENST00000445866 LAMA5O15230 3695 aa16.06■□□□□ 0.16
SGCE-206ENST00000445866 PRORSD1PA6NEY8 169 aa16.06■□□□□ 0.16
SGCE-206ENST00000445866 RRP9O43818 475 aaKnown RBP16.06■□□□□ 0.16
SGCE-206ENST00000445866 ZNF354AO60765 605 aaPredicted RBP16.06■□□□□ 0.16
SGCE-206ENST00000445866 TCN1P20061 433 aaPredicted RBP16.06■□□□□ 0.16
SGCE-206ENST00000445866 SSR4P51571 173 aa16.06■□□□□ 0.16
SGCE-206ENST00000445866 PSPHP78330 225 aa16.06■□□□□ 0.16
SGCE-206ENST00000445866 CDK6Q00534 326 aa16.06■□□□□ 0.16
SGCE-206ENST00000445866 GNA13Q14344 377 aa16.06■□□□□ 0.16
SGCE-206ENST00000445866 CRB2Q5IJ48 1285 aa16.06■□□□□ 0.16
SGCE-206ENST00000445866 DCST2Q5T1A1 773 aa16.06■□□□□ 0.16
SGCE-206ENST00000445866 HEPHL1Q6MZM0 1159 aa16.06■□□□□ 0.16
SGCE-206ENST00000445866 BORAQ6PGQ7 559 aa16.06■□□□□ 0.16
SGCE-206ENST00000445866 LINC00696Q6ZRV3 163 aa16.06■□□□□ 0.16
SGCE-206ENST00000445866 PTOV1Q86YD1 416 aa16.06■□□□□ 0.16
SGCE-206ENST00000445866 SLC34A3Q8N130 599 aa16.06■□□□□ 0.16
SGCE-206ENST00000445866 ARHGAP24Q8N264 748 aa16.06■□□□□ 0.16
SGCE-206ENST00000445866 TMEM156Q8N614 296 aa16.06■□□□□ 0.16
SGCE-206ENST00000445866 CHDHQ8NE62 594 aaPredicted RBP16.06■□□□□ 0.16
SGCE-206ENST00000445866 FAM110BQ8TC76 370 aa16.06■□□□□ 0.16
SGCE-206ENST00000445866 MCUR1Q96AQ8 359 aa16.06■□□□□ 0.16
SGCE-206ENST00000445866 OMA1Q96E52 524 aa16.06■□□□□ 0.16
SGCE-206ENST00000445866 REXO5Q96IC2 774 aaKnown RBP16.06■□□□□ 0.16
SGCE-206ENST00000445866 ADOQ96SZ5 270 aa16.06■□□□□ 0.16
SGCE-206ENST00000445866 G6PC3Q9BUM1 346 aa16.06■□□□□ 0.16
SGCE-206ENST00000445866 SPATA9Q9BWV2 254 aa16.06■□□□□ 0.16
SGCE-206ENST00000445866 CADM1Q9BY67 442 aaKnown RBP16.06■□□□□ 0.16
SGCE-206ENST00000445866 ALG2Q9H553 416 aa16.06■□□□□ 0.16
SGCE-206ENST00000445866 FBXO34Q9NWN3 711 aa16.06■□□□□ 0.16
SGCE-206ENST00000445866 CD300AQ9UGN4 299 aa16.06■□□□□ 0.16
SGCE-206ENST00000445866 PRPF19Q9UMS4 504 aaKnown RBP16.06■□□□□ 0.16
SGCE-206ENST00000445866 USP22Q9UPT9 525 aa16.06■□□□□ 0.16
SGCE-206ENST00000445866 IGF2RP11717 2491 aa16.06■□□□□ 0.16
SGCE-206ENST00000445866 SCN2AQ99250 2005 aa16.06■□□□□ 0.16
SGCE-206ENST00000445866 ELOVL7A1L3X0 281 aa16.05■□□□□ 0.16
SGCE-206ENST00000445866 ERICH4A6NGS2 130 aa16.05■□□□□ 0.16
SGCE-206ENST00000445866 GSTA4O15217 222 aa16.05■□□□□ 0.16
SGCE-206ENST00000445866 FCMRO60667 390 aa16.05■□□□□ 0.16
SGCE-206ENST00000445866 DNAJA2O60884 412 aa16.05■□□□□ 0.16
SGCE-206ENST00000445866 STX11O75558 287 aa16.05■□□□□ 0.16
SGCE-206ENST00000445866 NADKO95544 446 aaPredicted RBP16.05■□□□□ 0.16
SGCE-206ENST00000445866 AK1P00568 194 aa16.05■□□□□ 0.16
SGCE-206ENST00000445866 IGKV1D-16P01601 117 aa16.05■□□□□ 0.16
SGCE-206ENST00000445866 ALPPP05187 535 aa16.05■□□□□ 0.16
SGCE-206ENST00000445866 BCHEP06276 602 aa16.05■□□□□ 0.16
SGCE-206ENST00000445866 ATP6V1C1P21283 382 aa16.05■□□□□ 0.16
SGCE-206ENST00000445866 MSX2P35548 267 aaPredicted RBP16.05■□□□□ 0.16
SGCE-206ENST00000445866 PSMD4P55036 377 aaKnown RBP16.05■□□□□ 0.16
SGCE-206ENST00000445866 RBBP4Q09028 425 aa16.05■□□□□ 0.16
SGCE-206ENST00000445866 CEACAM7Q14002 265 aa16.05■□□□□ 0.16
SGCE-206ENST00000445866 SCARB2Q14108 478 aa16.05■□□□□ 0.16
SGCE-206ENST00000445866 TBR1Q16650 682 aa16.05■□□□□ 0.16
SGCE-206ENST00000445866 ZNF630Q2M218 657 aaPredicted RBP16.05■□□□□ 0.16
SGCE-206ENST00000445866 VMACQ2NL98 169 aa16.05■□□□□ 0.16
SGCE-206ENST00000445866 OPN5Q6U736 354 aa16.05■□□□□ 0.16
SGCE-206ENST00000445866 ISLR2Q6UXK2 745 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms