RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 UBFD1O14562 309 aaKnown RBP19.1■□□□□ 0.65
VSX1-206ENST00000444511 GLRA3O75311 464 aa19.1■□□□□ 0.65
VSX1-206ENST00000444511 CRCPO75575 148 aa19.1■□□□□ 0.65
VSX1-206ENST00000444511 GRK2P25098 689 aa19.1■□□□□ 0.65
VSX1-206ENST00000444511 STARP49675 285 aa19.1■□□□□ 0.65
VSX1-206ENST00000444511 NCBP2P52298 156 aaKnown RBP eCLIP19.1■□□□□ 0.65
VSX1-206ENST00000444511 FOXA1P55317 472 aa19.1■□□□□ 0.65
VSX1-206ENST00000444511 SORDQ00796 357 aa19.1■□□□□ 0.65
VSX1-206ENST00000444511 FOXF2Q12947 444 aa19.1■□□□□ 0.65
VSX1-206ENST00000444511 DAZAP2Q15038 168 aaPredicted RBP19.1■□□□□ 0.65
VSX1-206ENST00000444511 ZYG11AQ6WRX3 759 aa19.1■□□□□ 0.65
VSX1-206ENST00000444511 MZB1Q8WU39 189 aa19.1■□□□□ 0.65
VSX1-206ENST00000444511 WNT2BQ93097 391 aa19.1■□□□□ 0.65
VSX1-206ENST00000444511 SFXN3Q9BWM7 321 aa19.1■□□□□ 0.65
VSX1-206ENST00000444511 JKAMPQ9P055 326 aa19.1■□□□□ 0.65
VSX1-206ENST00000444511 EMCNQ9ULC0 261 aa19.1■□□□□ 0.65
VSX1-206ENST00000444511 CLCA1A8K7I4 914 aa19.09■□□□□ 0.65
VSX1-206ENST00000444511 MYO1GB0I1T2 1018 aa19.09■□□□□ 0.65
VSX1-206ENST00000444511 G3V2L1 256 aa19.09■□□□□ 0.65
VSX1-206ENST00000444511 RCBTB2O95199 551 aa19.09■□□□□ 0.65
VSX1-206ENST00000444511 JUNP05412 331 aaKnown RBP19.09■□□□□ 0.65
VSX1-206ENST00000444511 EPXP11678 715 aa19.09■□□□□ 0.65
VSX1-206ENST00000444511 TCEA1P23193 301 aaKnown RBP19.09■□□□□ 0.65
VSX1-206ENST00000444511 DNASE1P24855 282 aa19.09■□□□□ 0.65
VSX1-206ENST00000444511 NAA20P61599 178 aa19.09■□□□□ 0.65
VSX1-206ENST00000444511 SH2D4BQ5SQS7 431 aa19.09■□□□□ 0.65
VSX1-206ENST00000444511 CHDHQ8NE62 594 aaPredicted RBP19.09■□□□□ 0.65
VSX1-206ENST00000444511 OR4K17Q8NGC6 315 aa19.09■□□□□ 0.65
VSX1-206ENST00000444511 OR4N2Q8NGD1 307 aa19.09■□□□□ 0.65
VSX1-206ENST00000444511 RBM24Q9BX46 236 aaKnown RBP19.09■□□□□ 0.65
VSX1-206ENST00000444511 TXLNGYQ9BZA5 131 aa19.09■□□□□ 0.65
VSX1-206ENST00000444511 CXXC4Q9H2H0 198 aa19.09■□□□□ 0.65
VSX1-206ENST00000444511 ACBD3Q9H3P7 528 aa19.09■□□□□ 0.65
VSX1-206ENST00000444511 PLEKHA6Q9Y2H5 1048 aa19.09■□□□□ 0.65
VSX1-206ENST00000444511 RPH3AQ9Y2J0 694 aaPredicted RBP19.09■□□□□ 0.65
VSX1-206ENST00000444511 MRPS18CQ9Y3D5 142 aaKnown RBP19.09■□□□□ 0.65
VSX1-206ENST00000444511 KIAA1549Q9HCM3 1950 aa19.08■□□□□ 0.65
VSX1-206ENST00000444511 A0A087WV62 115 aa19.08■□□□□ 0.64
VSX1-206ENST00000444511 A0A1W2PPM1 405 aa19.08■□□□□ 0.64
VSX1-206ENST00000444511 H3BQF6 201 aa19.08■□□□□ 0.64
VSX1-206ENST00000444511 PLOD2O00469 737 aa19.08■□□□□ 0.64
VSX1-206ENST00000444511 SLITRK5O94991 958 aa19.08■□□□□ 0.64
VSX1-206ENST00000444511 CHMP24386 653 aa19.08■□□□□ 0.64
VSX1-206ENST00000444511 DPP4P27487 766 aa19.08■□□□□ 0.64
VSX1-206ENST00000444511 NTSP30990 170 aa19.08■□□□□ 0.64
VSX1-206ENST00000444511 MC3RP41968 323 aa19.08■□□□□ 0.64
VSX1-206ENST00000444511 CPA2P48052 419 aa19.08■□□□□ 0.64
VSX1-206ENST00000444511 LHX2P50458 406 aa19.08■□□□□ 0.64
VSX1-206ENST00000444511 CFAP157Q5JU67 520 aa19.08■□□□□ 0.64
VSX1-206ENST00000444511 TMEM107Q6UX40 140 aa19.08■□□□□ 0.64
VSX1-206ENST00000444511 ADGRE4PQ86SQ3 457 aa19.08■□□□□ 0.64
VSX1-206ENST00000444511 LUZP2Q86TE4 346 aa19.08■□□□□ 0.64
VSX1-206ENST00000444511 LINC01560Q8TB33 94 aa19.08■□□□□ 0.64
VSX1-206ENST00000444511 INTS12Q96CB8 462 aaKnown RBP19.08■□□□□ 0.64
VSX1-206ENST00000444511 UCN2Q96RP3 112 aa19.08■□□□□ 0.64
VSX1-206ENST00000444511 MYNNQ9NPC7 610 aa19.08■□□□□ 0.64
VSX1-206ENST00000444511 PPP4R1LQ9P1A2 415 aa19.08■□□□□ 0.64
VSX1-206ENST00000444511 GRID1Q9ULK0 1009 aa19.08■□□□□ 0.64
VSX1-206ENST00000444511 POLR3HQ9Y535 204 aaPredicted RBP19.08■□□□□ 0.64
VSX1-206ENST00000444511 C2CD3Q4AC94 2353 aa19.07■□□□□ 0.64
VSX1-206ENST00000444511 MED13LQ71F56 2210 aa19.07■□□□□ 0.64
VSX1-206ENST00000444511 SCO2O43819 266 aa19.07■□□□□ 0.64
VSX1-206ENST00000444511 PROCP04070 461 aa19.07■□□□□ 0.64
VSX1-206ENST00000444511 EVI2BP34910 448 aa19.07■□□□□ 0.64
VSX1-206ENST00000444511 GAS1P54826 345 aa19.07■□□□□ 0.64
VSX1-206ENST00000444511 PSG6Q00889 435 aa19.07■□□□□ 0.64
VSX1-206ENST00000444511 PRSS53Q2L4Q9 553 aa19.07■□□□□ 0.64
VSX1-206ENST00000444511 FAM71E1Q6IPT2 247 aa19.07■□□□□ 0.64
VSX1-206ENST00000444511 PLXDC2Q6UX71 529 aa19.07■□□□□ 0.64
VSX1-206ENST00000444511 FRMD7Q6ZUT3 714 aa19.07■□□□□ 0.64
VSX1-206ENST00000444511 TRIM46Q7Z4K8 759 aa19.07■□□□□ 0.64
VSX1-206ENST00000444511 GRAMD2AQ8IUY3 354 aa19.07■□□□□ 0.64
VSX1-206ENST00000444511 GSPT2Q8IYD1 628 aaKnown RBP19.07■□□□□ 0.64
VSX1-206ENST00000444511 GCNT2Q8N0V5 402 aa19.07■□□□□ 0.64
VSX1-206ENST00000444511 FAM76AQ8TAV0 307 aa19.07■□□□□ 0.64
VSX1-206ENST00000444511 RNF138Q8WVD3 245 aa19.07■□□□□ 0.64
VSX1-206ENST00000444511 G6PC3Q9BUM1 346 aa19.07■□□□□ 0.64
VSX1-206ENST00000444511 RRAGDQ9NQL2 400 aaPredicted RBP19.07■□□□□ 0.64
VSX1-206ENST00000444511 DDX18Q9NVP1 670 aaKnown RBP19.07■□□□□ 0.64
VSX1-206ENST00000444511 TAS2R7Q9NYW3 318 aa19.07■□□□□ 0.64
VSX1-206ENST00000444511 CLCF1Q9UBD9 225 aa19.07■□□□□ 0.64
VSX1-206ENST00000444511 WBP11Q9Y2W2 641 aaKnown RBP19.07■□□□□ 0.64
VSX1-206ENST00000444511 ZIC3O60481 467 aa19.06■□□□□ 0.64
VSX1-206ENST00000444511 RSL1D1O76021 490 aaKnown RBP19.06■□□□□ 0.64
VSX1-206ENST00000444511 CD99P14209 185 aa19.06■□□□□ 0.64
VSX1-206ENST00000444511 ZNF708P17019 499 aa19.06■□□□□ 0.64
VSX1-206ENST00000444511 CCT5P48643 541 aa19.06■□□□□ 0.64
VSX1-206ENST00000444511 DSCR4P56555 118 aaPredicted RBP19.06■□□□□ 0.64
VSX1-206ENST00000444511 CLDN18P56856 261 aa19.06■□□□□ 0.64
VSX1-206ENST00000444511 GAB1Q13480 694 aa19.06■□□□□ 0.64
VSX1-206ENST00000444511 ZNHIT3Q15649 155 aaPredicted RBP19.06■□□□□ 0.64
VSX1-206ENST00000444511 CCDC153Q494R4 210 aa19.06■□□□□ 0.64
VSX1-206ENST00000444511 CYP27C1Q4G0S4 372 aa19.06■□□□□ 0.64
VSX1-206ENST00000444511 CHMP1BQ7LBR1 199 aa19.06■□□□□ 0.64
VSX1-206ENST00000444511 CCDC63Q8NA47 563 aa19.06■□□□□ 0.64
VSX1-206ENST00000444511 PUM2Q8TB72 1066 aaKnown RBP eCLIP19.06■□□□□ 0.64
VSX1-206ENST00000444511 YIPF4Q9BSR8 244 aa19.06■□□□□ 0.64
VSX1-206ENST00000444511 PIGMQ9H3S5 423 aa19.06■□□□□ 0.64
VSX1-206ENST00000444511 Q9N2J8 555 aa19.06■□□□□ 0.64
VSX1-206ENST00000444511 SDHAF3Q9NRP4 125 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms