RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 SLC30A6Q6NXT4 461 aa9.9□□□□□ -0.82
SF3A1-203ENST00000444440 ZNF551Q7Z340 670 aaPredicted RBP9.9□□□□□ -0.82
SF3A1-203ENST00000444440 SLC44A2Q8IWA5 706 aaPredicted RBP9.9□□□□□ -0.82
SF3A1-203ENST00000444440 DMRTC2Q8IXT2 367 aaPredicted RBP9.9□□□□□ -0.82
SF3A1-203ENST00000444440 LIX1Q8N485 282 aa9.9□□□□□ -0.82
SF3A1-203ENST00000444440 OR1J4Q8NGS1 313 aa9.9□□□□□ -0.82
SF3A1-203ENST00000444440 AGR3Q8TD06 166 aa9.9□□□□□ -0.82
SF3A1-203ENST00000444440 TCP10LQ8TDR4 215 aa9.9□□□□□ -0.82
SF3A1-203ENST00000444440 NUDT8Q8WV74 236 aa9.9□□□□□ -0.82
SF3A1-203ENST00000444440 C3orf30Q96M34 536 aa9.9□□□□□ -0.82
SF3A1-203ENST00000444440 COL21A1Q96P44 957 aa9.9□□□□□ -0.82
SF3A1-203ENST00000444440 TSSK3Q96PN8 268 aa9.9□□□□□ -0.82
SF3A1-203ENST00000444440 ADOQ96SZ5 270 aa9.9□□□□□ -0.82
SF3A1-203ENST00000444440 PRDM14Q9GZV8 571 aa9.9□□□□□ -0.82
SF3A1-203ENST00000444440 STMN4Q9H169 189 aaPredicted RBP9.9□□□□□ -0.82
SF3A1-203ENST00000444440 CENPHQ9H3R5 247 aa9.9□□□□□ -0.82
SF3A1-203ENST00000444440 LRTM1Q9HBL6 345 aa9.9□□□□□ -0.82
SF3A1-203ENST00000444440 KCNJ16Q9NPI9 418 aa9.9□□□□□ -0.82
SF3A1-203ENST00000444440 RRAGDQ9NQL2 400 aaPredicted RBP9.9□□□□□ -0.82
SF3A1-203ENST00000444440 C1orf109Q9NX04 203 aa9.9□□□□□ -0.82
SF3A1-203ENST00000444440 B4GALT7Q9UBV7 327 aa9.9□□□□□ -0.82
SF3A1-203ENST00000444440 BAIAP2L1Q9UHR4 511 aa9.9□□□□□ -0.82
SF3A1-203ENST00000444440 A0A087WV62 115 aa9.89□□□□□ -0.83
SF3A1-203ENST00000444440 SLC28A1O00337 649 aa9.89□□□□□ -0.83
SF3A1-203ENST00000444440 PIP5K1BO14986 540 aa9.89□□□□□ -0.83
SF3A1-203ENST00000444440 LSM1O15116 133 aaKnown RBP9.89□□□□□ -0.83
SF3A1-203ENST00000444440 AKAP10O43572 662 aa9.89□□□□□ -0.83
SF3A1-203ENST00000444440 NPHS1O60500 1241 aa9.89□□□□□ -0.83
SF3A1-203ENST00000444440 EPPINO95925 133 aa9.89□□□□□ -0.83
SF3A1-203ENST00000444440 IGKV1D-16P01601 117 aa9.89□□□□□ -0.83
SF3A1-203ENST00000444440 CYP4B1P13584 511 aa9.89□□□□□ -0.83
SF3A1-203ENST00000444440 GABRA1P14867 456 aa9.89□□□□□ -0.83
SF3A1-203ENST00000444440 EFNA1P20827 205 aaPredicted RBP9.89□□□□□ -0.83
SF3A1-203ENST00000444440 TCEA1P23193 301 aaKnown RBP9.89□□□□□ -0.83
SF3A1-203ENST00000444440 CEACAM8P31997 349 aaPredicted RBP9.89□□□□□ -0.83
SF3A1-203ENST00000444440 MPIP34949 423 aa9.89□□□□□ -0.83
SF3A1-203ENST00000444440 GSTM5P46439 218 aa9.89□□□□□ -0.83
SF3A1-203ENST00000444440 ZNF136P52737 540 aa9.89□□□□□ -0.83
SF3A1-203ENST00000444440 RPL38P63173 70 aaKnown RBP9.89□□□□□ -0.83
SF3A1-203ENST00000444440 ZNF844Q08AG5 666 aa9.89□□□□□ -0.83
SF3A1-203ENST00000444440 ZNF155Q12901 538 aaPredicted RBP9.89□□□□□ -0.83
SF3A1-203ENST00000444440 CEP85LQ5SZL2 805 aa9.89□□□□□ -0.83
SF3A1-203ENST00000444440 RIPPLY2Q5TAB7 128 aa9.89□□□□□ -0.83
SF3A1-203ENST00000444440 LRIG3Q6UXM1 1119 aa9.89□□□□□ -0.83
SF3A1-203ENST00000444440 RNF165Q6ZSG1 346 aa9.89□□□□□ -0.83
SF3A1-203ENST00000444440 LARP4Q71RC2 724 aaKnown RBP eCLIP9.89□□□□□ -0.83
SF3A1-203ENST00000444440 SAMD14Q8IZD0 417 aaPredicted RBP9.89□□□□□ -0.83
SF3A1-203ENST00000444440 OR2L13Q8N349 312 aa9.89□□□□□ -0.83
SF3A1-203ENST00000444440 OR6Y1Q8NGX8 325 aa9.89□□□□□ -0.83
SF3A1-203ENST00000444440 FAM76AQ8TAV0 307 aa9.89□□□□□ -0.83
SF3A1-203ENST00000444440 TWIST2Q8WVJ9 160 aa9.89□□□□□ -0.83
SF3A1-203ENST00000444440 ERP27Q96DN0 273 aa9.89□□□□□ -0.83
SF3A1-203ENST00000444440 ELP4Q96EB1 424 aa9.89□□□□□ -0.83
SF3A1-203ENST00000444440 C14orf79Q96F83 325 aa9.89□□□□□ -0.83
SF3A1-203ENST00000444440 METTL2AQ96IZ6 378 aaKnown RBP9.89□□□□□ -0.83
SF3A1-203ENST00000444440 G6PC3Q9BUM1 346 aa9.89□□□□□ -0.83
SF3A1-203ENST00000444440 OR2B2Q9GZK3 357 aa9.89□□□□□ -0.83
SF3A1-203ENST00000444440 SSU72Q9NP77 194 aaKnown RBP9.89□□□□□ -0.83
SF3A1-203ENST00000444440 MIEF1Q9NQG6 463 aa9.89□□□□□ -0.83
SF3A1-203ENST00000444440 GIMAP4Q9NUV9 329 aa9.89□□□□□ -0.83
SF3A1-203ENST00000444440 C19orf53Q9UNZ5 99 aaPredicted RBP9.89□□□□□ -0.83
SF3A1-203ENST00000444440 CAMK2AQ9UQM7 478 aa9.89□□□□□ -0.83
SF3A1-203ENST00000444440 WBP11Q9Y2W2 641 aaKnown RBP9.89□□□□□ -0.83
SF3A1-203ENST00000444440 PCDHGB3Q9Y5G1 929 aa9.89□□□□□ -0.83
SF3A1-203ENST00000444440 WIF1Q9Y5W5 379 aa9.89□□□□□ -0.83
SF3A1-203ENST00000444440 AKAP6Q13023 2319 aa9.88□□□□□ -0.83
SF3A1-203ENST00000444440 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.88□□□□□ -0.83
SF3A1-203ENST00000444440 GXYLT2A0PJZ3 443 aa9.88□□□□□ -0.83
SF3A1-203ENST00000444440 PLOD2O00469 737 aa9.88□□□□□ -0.83
SF3A1-203ENST00000444440 RGS14O43566 566 aa9.88□□□□□ -0.83
SF3A1-203ENST00000444440 TYROBPO43914 113 aa9.88□□□□□ -0.83
SF3A1-203ENST00000444440 FADS1O60427 444 aa9.88□□□□□ -0.83
SF3A1-203ENST00000444440 BCAS2O75934 225 aaPredicted RBP9.88□□□□□ -0.83
SF3A1-203ENST00000444440 FGF4P08620 206 aa9.88□□□□□ -0.83
SF3A1-203ENST00000444440 HOXD4P09016 255 aaPredicted RBP9.88□□□□□ -0.83
SF3A1-203ENST00000444440 GRK2P25098 689 aa9.88□□□□□ -0.83
SF3A1-203ENST00000444440 ELAVL4P26378 380 aaKnown RBP9.88□□□□□ -0.83
SF3A1-203ENST00000444440 NTSP30990 170 aa9.88□□□□□ -0.83
SF3A1-203ENST00000444440 SERPINB5P36952 375 aa9.88□□□□□ -0.83
SF3A1-203ENST00000444440 MAP3K8P41279 467 aa9.88□□□□□ -0.83
SF3A1-203ENST00000444440 FRKP42685 505 aaPredicted RBP9.88□□□□□ -0.83
SF3A1-203ENST00000444440 ETV4P43268 484 aa9.88□□□□□ -0.83
SF3A1-203ENST00000444440 STARP49675 285 aa9.88□□□□□ -0.83
SF3A1-203ENST00000444440 GFRA1P56159 465 aa9.88□□□□□ -0.83
SF3A1-203ENST00000444440 RPP38P78345 283 aaKnown RBP9.88□□□□□ -0.83
SF3A1-203ENST00000444440 TLE4Q04727 773 aa9.88□□□□□ -0.83
SF3A1-203ENST00000444440 HSPB3Q12988 150 aa9.88□□□□□ -0.83
SF3A1-203ENST00000444440 SNTA1Q13424 505 aa9.88□□□□□ -0.83
SF3A1-203ENST00000444440 GAB1Q13480 694 aa9.88□□□□□ -0.83
SF3A1-203ENST00000444440 PDE7AQ13946 482 aa9.88□□□□□ -0.83
SF3A1-203ENST00000444440 GALNTL6Q49A17 601 aa9.88□□□□□ -0.83
SF3A1-203ENST00000444440 XKR7Q5GH72 579 aa9.88□□□□□ -0.83
SF3A1-203ENST00000444440 SH2D4BQ5SQS7 431 aa9.88□□□□□ -0.83
SF3A1-203ENST00000444440 IKBIPQ70UQ0 350 aa9.88□□□□□ -0.83
SF3A1-203ENST00000444440 NUDCD3Q8IVD9 361 aa9.88□□□□□ -0.83
SF3A1-203ENST00000444440 C9orf106Q8NAJ2 232 aa9.88□□□□□ -0.83
SF3A1-203ENST00000444440 PPP1R14CQ8TAE6 165 aa9.88□□□□□ -0.83
SF3A1-203ENST00000444440 ABTB1Q969K4 478 aaPredicted RBP9.88□□□□□ -0.83
SF3A1-203ENST00000444440 GIMAP5Q96F15 307 aa9.88□□□□□ -0.83
SF3A1-203ENST00000444440 PKNOX2Q96KN3 472 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 153 ms