RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 TCEAL5Q5H9L2 206 aa11.2□□□□□ -0.62
LTBR-203ENST00000441074 CRTC1Q6UUV9 634 aa11.2□□□□□ -0.62
LTBR-203ENST00000441074 LIPIQ6XZB0 460 aa11.2□□□□□ -0.62
LTBR-203ENST00000441074 MS4A15Q8N5U1 240 aa11.2□□□□□ -0.62
LTBR-203ENST00000441074 ZNF485Q8NCK3 441 aa11.2□□□□□ -0.62
LTBR-203ENST00000441074 RSPRY1Q96DX4 576 aa11.2□□□□□ -0.62
LTBR-203ENST00000441074 RNFT2Q96EX2 444 aa11.2□□□□□ -0.62
LTBR-203ENST00000441074 WBP1Q96G27 269 aa11.2□□□□□ -0.62
LTBR-203ENST00000441074 NLNQ9BYT8 704 aa11.2□□□□□ -0.62
LTBR-203ENST00000441074 SHARPINQ9H0F6 387 aa11.2□□□□□ -0.62
LTBR-203ENST00000441074 CYSLTR2Q9NS75 346 aa11.2□□□□□ -0.62
LTBR-203ENST00000441074 NUDT15Q9NV35 164 aa11.2□□□□□ -0.62
LTBR-203ENST00000441074 TEX13CA0A0J9YWL9 993 aa11.2□□□□□ -0.62
LTBR-203ENST00000441074 CXorf51AA0A1B0GTR3 108 aa11.2□□□□□ -0.62
LTBR-203ENST00000441074 SHISA3A0PJX4 238 aa11.2□□□□□ -0.62
LTBR-203ENST00000441074 OTOL1A6NHN0 477 aaPredicted RBP11.2□□□□□ -0.62
LTBR-203ENST00000441074 ATG13O75143 517 aa11.2□□□□□ -0.62
LTBR-203ENST00000441074 ACSM4P0C7M7 580 aa11.2□□□□□ -0.62
LTBR-203ENST00000441074 OPRD1P41143 372 aa11.2□□□□□ -0.62
LTBR-203ENST00000441074 GIPRP48546 466 aa11.2□□□□□ -0.62
LTBR-203ENST00000441074 SMIM11AP58511 58 aa11.2□□□□□ -0.62
LTBR-203ENST00000441074 DCDC1P59894 354 aa11.2□□□□□ -0.62
LTBR-203ENST00000441074 COX10Q12887 443 aa11.2□□□□□ -0.62
LTBR-203ENST00000441074 GINS1Q14691 196 aa11.2□□□□□ -0.62
LTBR-203ENST00000441074 POM121L1PQ3SYA9 428 aa11.2□□□□□ -0.62
LTBR-203ENST00000441074 ATP13A5Q4VNC0 1218 aa11.2□□□□□ -0.62
LTBR-203ENST00000441074 HACD4Q5VWC8 232 aa11.2□□□□□ -0.62
LTBR-203ENST00000441074 TMEM215Q68D42 235 aa11.2□□□□□ -0.62
LTBR-203ENST00000441074 GRHL2Q6ISB3 625 aa11.2□□□□□ -0.62
LTBR-203ENST00000441074 REEP3Q6NUK4 255 aa11.2□□□□□ -0.62
LTBR-203ENST00000441074 TCTN3Q6NUS6 607 aa11.2□□□□□ -0.62
LTBR-203ENST00000441074 KIAA1211LQ6NV74 962 aa11.2□□□□□ -0.62
LTBR-203ENST00000441074 CD300LDQ6UXZ3 194 aa11.2□□□□□ -0.62
LTBR-203ENST00000441074 TMEM91Q6ZNR0 172 aa11.2□□□□□ -0.62
LTBR-203ENST00000441074 Q7L0L9 218 aa11.2□□□□□ -0.62
LTBR-203ENST00000441074 PRICKLE2Q7Z3G6 844 aa11.2□□□□□ -0.62
LTBR-203ENST00000441074 TSPAN33Q86UF1 283 aa11.2□□□□□ -0.62
LTBR-203ENST00000441074 ZFP41Q8N8Y5 198 aa11.2□□□□□ -0.62
LTBR-203ENST00000441074 OR5M3Q8NGP4 307 aa11.2□□□□□ -0.62
LTBR-203ENST00000441074 SLC9A6Q92581 669 aa11.2□□□□□ -0.62
LTBR-203ENST00000441074 FUZQ9BT04 418 aa11.2□□□□□ -0.62
LTBR-203ENST00000441074 REG4Q9BYZ8 158 aa11.2□□□□□ -0.62
LTBR-203ENST00000441074 ZDHHC4Q9NPG8 344 aa11.2□□□□□ -0.62
LTBR-203ENST00000441074 IMP3Q9NV31 184 aaKnown RBP11.2□□□□□ -0.62
LTBR-203ENST00000441074 GLS2Q9UI32 602 aa11.2□□□□□ -0.62
LTBR-203ENST00000441074 SCP2D1Q9UJQ7 156 aa11.2□□□□□ -0.62
LTBR-203ENST00000441074 MAFFQ9ULX9 164 aa11.2□□□□□ -0.62
LTBR-203ENST00000441074 PPIL1Q9Y3C6 166 aa11.2□□□□□ -0.62
LTBR-203ENST00000441074 KCNMB2Q9Y691 235 aa11.2□□□□□ -0.62
LTBR-203ENST00000441074 PLXNB3Q9ULL4 1909 aa11.19□□□□□ -0.62
LTBR-203ENST00000441074 MYOFQ9NZM1 2061 aa11.19□□□□□ -0.62
LTBR-203ENST00000441074 H3BUI4 141 aa11.19□□□□□ -0.62
LTBR-203ENST00000441074 GABRPO00591 440 aa11.19□□□□□ -0.62
LTBR-203ENST00000441074 PRODHO43272 600 aa11.19□□□□□ -0.62
LTBR-203ENST00000441074 HRO43593 1189 aa11.19□□□□□ -0.62
LTBR-203ENST00000441074 LIMS3P0CW19 117 aa11.19□□□□□ -0.62
LTBR-203ENST00000441074 LIMS4P0CW20 117 aa11.19□□□□□ -0.62
LTBR-203ENST00000441074 SULT1A3P0DMM9 295 aa11.19□□□□□ -0.62
LTBR-203ENST00000441074 SULT1A4P0DMN0 295 aa11.19□□□□□ -0.62
LTBR-203ENST00000441074 TFPIP10646 304 aa11.19□□□□□ -0.62
LTBR-203ENST00000441074 TYRP14679 529 aa11.19□□□□□ -0.62
LTBR-203ENST00000441074 RFX3P48380 749 aa11.19□□□□□ -0.62
LTBR-203ENST00000441074 EIF2B5Q13144 721 aaKnown RBP11.19□□□□□ -0.62
LTBR-203ENST00000441074 ZNF273Q14593 569 aa11.19□□□□□ -0.62
LTBR-203ENST00000441074 ACSM5Q6NUN0 579 aa11.19□□□□□ -0.62
LTBR-203ENST00000441074 LRRC28Q86X40 367 aaPredicted RBP11.19□□□□□ -0.62
LTBR-203ENST00000441074 KLHDC8AQ8IYD2 350 aa11.19□□□□□ -0.62
LTBR-203ENST00000441074 OR2AP1Q8NGE2 309 aa11.19□□□□□ -0.62
LTBR-203ENST00000441074 OR52H1Q8NGJ2 320 aa11.19□□□□□ -0.62
LTBR-203ENST00000441074 CYB5D2Q8WUJ1 264 aa11.19□□□□□ -0.62
LTBR-203ENST00000441074 SMG7Q92540 1137 aaKnown RBP11.19□□□□□ -0.62
LTBR-203ENST00000441074 SCRN2Q96FV2 425 aa11.19□□□□□ -0.62
LTBR-203ENST00000441074 SGK2Q9HBY8 427 aa11.19□□□□□ -0.62
LTBR-203ENST00000441074 DLL4Q9NR61 685 aa11.19□□□□□ -0.62
LTBR-203ENST00000441074 ENAMQ9NRM1 1142 aa11.19□□□□□ -0.62
LTBR-203ENST00000441074 CBLCQ9ULV8 474 aa11.19□□□□□ -0.62
LTBR-203ENST00000441074 CLCA2Q9UQC9 943 aa11.19□□□□□ -0.62
LTBR-203ENST00000441074 MRPS23Q9Y3D9 190 aaKnown RBP11.19□□□□□ -0.62
LTBR-203ENST00000441074 E7EQ34 232 aa11.19□□□□□ -0.62
LTBR-203ENST00000441074 GPR171O14626 319 aa11.19□□□□□ -0.62
LTBR-203ENST00000441074 SEMA7AO75326 666 aa11.19□□□□□ -0.62
LTBR-203ENST00000441074 SH3BGRLO75368 114 aa11.19□□□□□ -0.62
LTBR-203ENST00000441074 APOL3O95236 402 aa11.19□□□□□ -0.62
LTBR-203ENST00000441074 TCRBP04435 133 aa11.19□□□□□ -0.62
LTBR-203ENST00000441074 PEPDP12955 493 aa11.19□□□□□ -0.62
LTBR-203ENST00000441074 MMP12P39900 470 aa11.19□□□□□ -0.62
LTBR-203ENST00000441074 PNLIPRP1P54315 467 aa11.19□□□□□ -0.62
LTBR-203ENST00000441074 DSTNP60981 165 aa11.19□□□□□ -0.62
LTBR-203ENST00000441074 SNRPD1P62314 119 aaKnown RBP11.19□□□□□ -0.62
LTBR-203ENST00000441074 CDK5Q00535 292 aa11.19□□□□□ -0.62
LTBR-203ENST00000441074 NDUFA9Q16795 377 aa11.19□□□□□ -0.62
LTBR-203ENST00000441074 BHLHB9Q6PI77 547 aa11.19□□□□□ -0.62
LTBR-203ENST00000441074 TFAP2EQ6VUC0 442 aa11.19□□□□□ -0.62
LTBR-203ENST00000441074 KIAA0907Q7Z7F0 614 aaPredicted RBP11.19□□□□□ -0.62
LTBR-203ENST00000441074 THOC6Q86W42 341 aaKnown RBP11.19□□□□□ -0.62
LTBR-203ENST00000441074 RASGRP3Q8IV61 690 aa11.19□□□□□ -0.62
LTBR-203ENST00000441074 SFTPA1Q8IWL2 248 aa11.19□□□□□ -0.62
LTBR-203ENST00000441074 GPR156Q8NFN8 814 aa11.19□□□□□ -0.62
LTBR-203ENST00000441074 GPR32P1Q8NGA4 272 aa11.19□□□□□ -0.62
LTBR-203ENST00000441074 OR5AK3PQ8NH89 298 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms