RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 PAOXQ6QHF9 649 aa10.84□□□□□ -0.67
HSPG2-206ENST00000439717 PACS2Q86VP3 889 aa10.84□□□□□ -0.67
HSPG2-206ENST00000439717 CLECL1Q8IZS7 167 aa10.84□□□□□ -0.67
HSPG2-206ENST00000439717 MIER2Q8N344 545 aa10.84□□□□□ -0.67
HSPG2-206ENST00000439717 OR4N2Q8NGD1 307 aa10.84□□□□□ -0.67
HSPG2-206ENST00000439717 TMEM41AQ96HV5 264 aa10.84□□□□□ -0.67
HSPG2-206ENST00000439717 RILPQ96NA2 401 aa10.84□□□□□ -0.67
HSPG2-206ENST00000439717 ADOQ96SZ5 270 aa10.84□□□□□ -0.67
HSPG2-206ENST00000439717 STACQ99469 402 aa10.84□□□□□ -0.67
HSPG2-206ENST00000439717 EBF4Q9BQW3 602 aa10.84□□□□□ -0.67
HSPG2-206ENST00000439717 CCDC134Q9H6E4 229 aa10.84□□□□□ -0.67
HSPG2-206ENST00000439717 METTL7AQ9H8H3 244 aa10.84□□□□□ -0.67
HSPG2-206ENST00000439717 ZDHHC11Q9H8X9 412 aa10.84□□□□□ -0.67
HSPG2-206ENST00000439717 ZFP64Q9NPA5 681 aa10.84□□□□□ -0.67
HSPG2-206ENST00000439717 TUBA8Q9NY65 449 aaPredicted RBP10.84□□□□□ -0.67
HSPG2-206ENST00000439717 NPIPA1Q9UND3 350 aa10.84□□□□□ -0.67
HSPG2-206ENST00000439717 FAF1Q9UNN5 650 aaPredicted RBP10.84□□□□□ -0.67
HSPG2-206ENST00000439717 UBR5O95071 2799 aaPredicted RBP10.84□□□□□ -0.67
HSPG2-206ENST00000439717 PRAMEF25A6NGN4 478 aa10.83□□□□□ -0.68
HSPG2-206ENST00000439717 DYNC1I1O14576 645 aa10.83□□□□□ -0.68
HSPG2-206ENST00000439717 HS6ST1O60243 411 aa10.83□□□□□ -0.68
HSPG2-206ENST00000439717 IL33O95760 270 aa10.83□□□□□ -0.68
HSPG2-206ENST00000439717 HMGN2P05204 90 aaKnown RBP10.83□□□□□ -0.68
HSPG2-206ENST00000439717 ALOX5P09917 674 aa10.83□□□□□ -0.68
HSPG2-206ENST00000439717 ACP2P11117 423 aa10.83□□□□□ -0.68
HSPG2-206ENST00000439717 LCN1P31025 176 aa10.83□□□□□ -0.68
HSPG2-206ENST00000439717 SOAT1P35610 550 aa10.83□□□□□ -0.68
HSPG2-206ENST00000439717 STX1BP61266 288 aa10.83□□□□□ -0.68
HSPG2-206ENST00000439717 TP53BP2Q13625 1128 aa10.83□□□□□ -0.68
HSPG2-206ENST00000439717 LASP1Q14847 261 aaKnown RBP10.83□□□□□ -0.68
HSPG2-206ENST00000439717 CMPK2Q5EBM0 449 aa10.83□□□□□ -0.68
HSPG2-206ENST00000439717 CDC73Q6P1J9 531 aa10.83□□□□□ -0.68
HSPG2-206ENST00000439717 MSANTD1Q6ZTZ1 278 aa10.83□□□□□ -0.68
HSPG2-206ENST00000439717 WDR53Q7Z5U6 358 aaPredicted RBP10.83□□□□□ -0.68
HSPG2-206ENST00000439717 GHDCQ8N2G8 530 aa10.83□□□□□ -0.68
HSPG2-206ENST00000439717 FAM109AQ8N4B1 249 aa10.83□□□□□ -0.68
HSPG2-206ENST00000439717 TMEM251Q8N6I4 163 aa10.83□□□□□ -0.68
HSPG2-206ENST00000439717 SLC16A11Q8NCK7 471 aa10.83□□□□□ -0.68
HSPG2-206ENST00000439717 OR4A15Q8NGL6 344 aa10.83□□□□□ -0.68
HSPG2-206ENST00000439717 GOT1L1Q8NHS2 421 aaPredicted RBP10.83□□□□□ -0.68
HSPG2-206ENST00000439717 GPR151Q8TDV0 419 aa10.83□□□□□ -0.68
HSPG2-206ENST00000439717 RNF138Q8WVD3 245 aa10.83□□□□□ -0.68
HSPG2-206ENST00000439717 SLC9A6Q92581 669 aa10.83□□□□□ -0.68
HSPG2-206ENST00000439717 C16orf58Q96GQ5 468 aa10.83□□□□□ -0.68
HSPG2-206ENST00000439717 MARK4Q96L34 752 aa10.83□□□□□ -0.68
HSPG2-206ENST00000439717 ZNF597Q96LX8 424 aa10.83□□□□□ -0.68
HSPG2-206ENST00000439717 CCDC115Q96NT0 180 aa10.83□□□□□ -0.68
HSPG2-206ENST00000439717 OR52E6Q96RD3 313 aa10.83□□□□□ -0.68
HSPG2-206ENST00000439717 NODALQ96S42 347 aa10.83□□□□□ -0.68
HSPG2-206ENST00000439717 ACTRT3Q9BYD9 372 aa10.83□□□□□ -0.68
HSPG2-206ENST00000439717 PIGUQ9H490 435 aa10.83□□□□□ -0.68
HSPG2-206ENST00000439717 DUSP22Q9NRW4 184 aa10.83□□□□□ -0.68
HSPG2-206ENST00000439717 GPATCH2Q9NW75 528 aa10.83□□□□□ -0.68
HSPG2-206ENST00000439717 TMEM45AQ9NWC5 275 aa10.83□□□□□ -0.68
HSPG2-206ENST00000439717 QPCTLQ9NXS2 382 aa10.83□□□□□ -0.68
HSPG2-206ENST00000439717 B4GALT7Q9UBV7 327 aa10.83□□□□□ -0.68
HSPG2-206ENST00000439717 PCDHGB3Q9Y5G1 929 aa10.83□□□□□ -0.68
HSPG2-206ENST00000439717 RNF103-CHMP3A0A140T963 221 aa10.82□□□□□ -0.68
HSPG2-206ENST00000439717 FAM234BA2RU67 622 aa10.82□□□□□ -0.68
HSPG2-206ENST00000439717 LRRC3CA6NJW4 275 aa10.82□□□□□ -0.68
HSPG2-206ENST00000439717 FAM166BA8MTA8 275 aa10.82□□□□□ -0.68
HSPG2-206ENST00000439717 ICOSLGO75144 302 aa10.82□□□□□ -0.68
HSPG2-206ENST00000439717 WISP2O76076 250 aa10.82□□□□□ -0.68
HSPG2-206ENST00000439717 STSP08842 583 aa10.82□□□□□ -0.68
HSPG2-206ENST00000439717 CYP4B1P13584 511 aa10.82□□□□□ -0.68
HSPG2-206ENST00000439717 UQCRC2P22695 453 aa10.82□□□□□ -0.68
HSPG2-206ENST00000439717 ELAVL4P26378 380 aaKnown RBP10.82□□□□□ -0.68
HSPG2-206ENST00000439717 PTGDSP41222 190 aa10.82□□□□□ -0.68
HSPG2-206ENST00000439717 MASP1P48740 699 aa10.82□□□□□ -0.68
HSPG2-206ENST00000439717 ATP4BP51164 291 aa10.82□□□□□ -0.68
HSPG2-206ENST00000439717 DGKQP52824 942 aa10.82□□□□□ -0.68
HSPG2-206ENST00000439717 KCNK10P57789 538 aa10.82□□□□□ -0.68
HSPG2-206ENST00000439717 DUSP5Q16690 384 aa10.82□□□□□ -0.68
HSPG2-206ENST00000439717 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.82□□□□□ -0.68
HSPG2-206ENST00000439717 EIF2S3LQ2VIR3 472 aaKnown RBP10.82□□□□□ -0.68
HSPG2-206ENST00000439717 BICRALQ6AI39 1079 aa10.82□□□□□ -0.68
HSPG2-206ENST00000439717 DESI1Q6ICB0 168 aa10.82□□□□□ -0.68
HSPG2-206ENST00000439717 C6orf120Q7Z4R8 191 aa10.82□□□□□ -0.68
HSPG2-206ENST00000439717 ANKRD46Q86W74 232 aa10.82□□□□□ -0.68
HSPG2-206ENST00000439717 TRIML2Q8N7C3 387 aa10.82□□□□□ -0.68
HSPG2-206ENST00000439717 OR52N2Q8NGI0 321 aa10.82□□□□□ -0.68
HSPG2-206ENST00000439717 PRR7Q8TB68 274 aa10.82□□□□□ -0.68
HSPG2-206ENST00000439717 FAM110BQ8TC76 370 aa10.82□□□□□ -0.68
HSPG2-206ENST00000439717 ADAMTS15Q8TE58 950 aa10.82□□□□□ -0.68
HSPG2-206ENST00000439717 PIK3R3Q92569 461 aa10.82□□□□□ -0.68
HSPG2-206ENST00000439717 JADE3Q92613 823 aa10.82□□□□□ -0.68
HSPG2-206ENST00000439717 EFHD2Q96C19 240 aaPredicted RBP10.82□□□□□ -0.68
HSPG2-206ENST00000439717 JSRP1Q96MG2 331 aaPredicted RBP10.82□□□□□ -0.68
HSPG2-206ENST00000439717 G6PC3Q9BUM1 346 aa10.82□□□□□ -0.68
HSPG2-206ENST00000439717 BTBD2Q9BX70 525 aa10.82□□□□□ -0.68
HSPG2-206ENST00000439717 OSBPL11Q9BXB4 747 aa10.82□□□□□ -0.68
HSPG2-206ENST00000439717 TSPAN10Q9H1Z9 355 aaPredicted RBP10.82□□□□□ -0.68
HSPG2-206ENST00000439717 ZNF703Q9H7S9 590 aaPredicted RBP10.82□□□□□ -0.68
HSPG2-206ENST00000439717 NPHS2Q9NP85 383 aa10.82□□□□□ -0.68
HSPG2-206ENST00000439717 PLSCR2Q9NRY7 297 aa10.82□□□□□ -0.68
HSPG2-206ENST00000439717 KLRF1Q9NZS2 232 aa10.82□□□□□ -0.68
HSPG2-206ENST00000439717 ABCG2Q9UNQ0 655 aa10.82□□□□□ -0.68
HSPG2-206ENST00000439717 TRIM33Q9UPN9 1127 aa10.82□□□□□ -0.68
HSPG2-206ENST00000439717 GCN1Q92616 2671 aaKnown RBP10.81□□□□□ -0.68
HSPG2-206ENST00000439717 GXYLT2A0PJZ3 443 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms