RNA–Protein interactions for RNA: ENST00000439669.5

CPNE1-217, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 784 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-217ENST00000439669 ATP6V1HQ9UI12 483 aa21.97■■□□□ 1.11
CPNE1-217ENST00000439669 EIF3LQ9Y262 564 aaKnown RBP21.97■■□□□ 1.11
CPNE1-217ENST00000439669 NCKAP5O14513 1909 aa21.97■■□□□ 1.11
CPNE1-217ENST00000439669 FIGNL2A6NMB9 653 aa21.96■■□□□ 1.11
CPNE1-217ENST00000439669 PTGDSP41222 190 aa21.96■■□□□ 1.11
CPNE1-217ENST00000439669 MRPS22P82650 360 aaKnown RBP21.96■■□□□ 1.11
CPNE1-217ENST00000439669 MAD2L1Q13257 205 aaPredicted RBP21.96■■□□□ 1.11
CPNE1-217ENST00000439669 CASP8Q14790 479 aa21.96■■□□□ 1.11
CPNE1-217ENST00000439669 ZNF787Q6DD87 383 aa21.96■■□□□ 1.11
CPNE1-217ENST00000439669 TMEM211Q6ICI0 200 aa21.96■■□□□ 1.11
CPNE1-217ENST00000439669 KIRREL3Q8IZU9 778 aa21.96■■□□□ 1.11
CPNE1-217ENST00000439669 NEIL3Q8TAT5 605 aa21.96■■□□□ 1.11
CPNE1-217ENST00000439669 MAPRE3Q9UPY8 281 aa21.96■■□□□ 1.11
CPNE1-217ENST00000439669 PCNX1Q96RV3 2341 aa21.95■■□□□ 1.1
CPNE1-217ENST00000439669 C15orf38-AP3S2A0A0A6YYH1 394 aa21.95■■□□□ 1.1
CPNE1-217ENST00000439669 SNPHO15079 494 aa21.95■■□□□ 1.1
CPNE1-217ENST00000439669 AGAP20933 346 aa21.95■■□□□ 1.1
CPNE1-217ENST00000439669 DCTP40126 519 aa21.95■■□□□ 1.1
CPNE1-217ENST00000439669 FRKP42685 505 aaPredicted RBP21.95■■□□□ 1.1
CPNE1-217ENST00000439669 PNLIPRP2P54317 469 aa21.95■■□□□ 1.1
CPNE1-217ENST00000439669 PRKAG1P54619 331 aa21.95■■□□□ 1.1
CPNE1-217ENST00000439669 WDR4P57081 412 aaKnown RBP21.95■■□□□ 1.1
CPNE1-217ENST00000439669 BST1Q10588 318 aa21.95■■□□□ 1.1
CPNE1-217ENST00000439669 CYP27C1Q4G0S4 372 aa21.95■■□□□ 1.1
CPNE1-217ENST00000439669 RPRMLQ8N4K4 120 aa21.95■■□□□ 1.1
CPNE1-217ENST00000439669 MARVELD2Q8N4S9 558 aa21.95■■□□□ 1.1
CPNE1-217ENST00000439669 SDCCAG3Q96C92 435 aa21.95■■□□□ 1.1
CPNE1-217ENST00000439669 LMF2Q9BU23 707 aaKnown RBP21.95■■□□□ 1.1
CPNE1-217ENST00000439669 UBQLN3Q9H347 655 aa21.95■■□□□ 1.1
CPNE1-217ENST00000439669 ALKBH4Q9NXW9 302 aa21.95■■□□□ 1.1
CPNE1-217ENST00000439669 NKIRAS1Q9NYS0 192 aa21.95■■□□□ 1.1
CPNE1-217ENST00000439669 COQ3Q9NZJ6 369 aa21.95■■□□□ 1.1
CPNE1-217ENST00000439669 CBLCQ9ULV8 474 aa21.95■■□□□ 1.1
CPNE1-217ENST00000439669 NCOA6Q14686 2063 aaPredicted RBP21.95■■□□□ 1.1
CPNE1-217ENST00000439669 ACVR2AP27037 513 aa21.94■■□□□ 1.1
CPNE1-217ENST00000439669 PTPN6P29350 595 aa21.94■■□□□ 1.1
CPNE1-217ENST00000439669 RFX3P48380 749 aa21.94■■□□□ 1.1
CPNE1-217ENST00000439669 GAB1Q13480 694 aa21.94■■□□□ 1.1
CPNE1-217ENST00000439669 DECR1Q16698 335 aa21.94■■□□□ 1.1
CPNE1-217ENST00000439669 CPTPQ5TA50 214 aa21.94■■□□□ 1.1
CPNE1-217ENST00000439669 KRTCAP2Q8N6L1 136 aa21.94■■□□□ 1.1
CPNE1-217ENST00000439669 NUP43Q8NFH3 380 aa21.94■■□□□ 1.1
CPNE1-217ENST00000439669 CEP70Q8NHQ1 597 aa21.94■■□□□ 1.1
CPNE1-217ENST00000439669 TLCD1Q96CP7 247 aa21.94■■□□□ 1.1
CPNE1-217ENST00000439669 NTNG2Q96CW9 530 aa21.94■■□□□ 1.1
CPNE1-217ENST00000439669 C3orf14Q9HBI5 128 aa21.94■■□□□ 1.1
CPNE1-217ENST00000439669 SERHLQ9NQF3 203 aa21.94■■□□□ 1.1
CPNE1-217ENST00000439669 ATAD3AQ9NVI7 634 aa21.94■■□□□ 1.1
CPNE1-217ENST00000439669 NOP53Q9NZM5 478 aaKnown RBP21.94■■□□□ 1.1
CPNE1-217ENST00000439669 KLF2Q9Y5W3 355 aaPredicted RBP21.94■■□□□ 1.1
CPNE1-217ENST00000439669 HPNP05981 417 aa21.93■■□□□ 1.1
CPNE1-217ENST00000439669 LAMP1P11279 417 aa21.93■■□□□ 1.1
CPNE1-217ENST00000439669 G6PDP11413 515 aa21.93■■□□□ 1.1
CPNE1-217ENST00000439669 CYP4B1P13584 511 aa21.93■■□□□ 1.1
CPNE1-217ENST00000439669 PRPS1L1P21108 318 aa21.93■■□□□ 1.1
CPNE1-217ENST00000439669 HTR1EP28566 365 aa21.93■■□□□ 1.1
CPNE1-217ENST00000439669 GABRA3P34903 492 aa21.93■■□□□ 1.1
CPNE1-217ENST00000439669 EMX2Q04743 252 aa21.93■■□□□ 1.1
CPNE1-217ENST00000439669 MS4A4EQ96PG1 132 aa21.93■■□□□ 1.1
CPNE1-217ENST00000439669 PRPF18Q99633 342 aaKnown RBP21.93■■□□□ 1.1
CPNE1-217ENST00000439669 NUF2Q9BZD4 464 aa21.93■■□□□ 1.1
CPNE1-217ENST00000439669 AKTIPQ9H8T0 292 aa21.93■■□□□ 1.1
CPNE1-217ENST00000439669 HAO1Q9UJM8 370 aa21.93■■□□□ 1.1
CPNE1-217ENST00000439669 MRTO4Q9UKD2 239 aaKnown RBP21.93■■□□□ 1.1
CPNE1-217ENST00000439669 WIF1Q9Y5W5 379 aa21.93■■□□□ 1.1
CPNE1-217ENST00000439669 A0A1W2PRB8 838 aa21.92■■□□□ 1.1
CPNE1-217ENST00000439669 TTC36A6NLP5 189 aa21.92■■□□□ 1.1
CPNE1-217ENST00000439669 EMC8O43402 210 aa21.92■■□□□ 1.1
CPNE1-217ENST00000439669 WDR1O75083 606 aa21.92■■□□□ 1.1
CPNE1-217ENST00000439669 CLDN14O95500 239 aa21.92■■□□□ 1.1
CPNE1-217ENST00000439669 CDSNQ15517 529 aa21.92■■□□□ 1.1
CPNE1-217ENST00000439669 EIPR1Q53HC9 387 aa21.92■■□□□ 1.1
CPNE1-217ENST00000439669 FBXO30Q8TB52 745 aa21.92■■□□□ 1.1
CPNE1-217ENST00000439669 GPR151Q8TDV0 419 aa21.92■■□□□ 1.1
CPNE1-217ENST00000439669 RND1Q92730 232 aa21.92■■□□□ 1.1
CPNE1-217ENST00000439669 PNPOQ9NVS9 261 aa21.92■■□□□ 1.1
CPNE1-217ENST00000439669 SLC6A5Q9Y345 797 aa21.92■■□□□ 1.1
CPNE1-217ENST00000439669 SNX8Q9Y5X2 465 aa21.92■■□□□ 1.1
CPNE1-217ENST00000439669 UTP20O75691 2785 aaKnown RBP21.91■■□□□ 1.1
CPNE1-217ENST00000439669 SCO2O43819 266 aa21.91■■□□□ 1.1
CPNE1-217ENST00000439669 GRNP28799 593 aaKnown RBP21.91■■□□□ 1.1
CPNE1-217ENST00000439669 EVI2BP34910 448 aa21.91■■□□□ 1.1
CPNE1-217ENST00000439669 SLC18A1P54219 525 aa21.91■■□□□ 1.1
CPNE1-217ENST00000439669 PSMD4P55036 377 aaKnown RBP21.91■■□□□ 1.1
CPNE1-217ENST00000439669 NUP107P57740 925 aa21.91■■□□□ 1.1
CPNE1-217ENST00000439669 PRR5P85299 388 aa21.91■■□□□ 1.1
CPNE1-217ENST00000439669 PMPCAQ10713 525 aa21.91■■□□□ 1.1
CPNE1-217ENST00000439669 MLC1Q15049 377 aa21.91■■□□□ 1.1
CPNE1-217ENST00000439669 SMU1Q2TAY7 513 aa21.91■■□□□ 1.1
CPNE1-217ENST00000439669 VPS26BQ4G0F5 336 aa21.91■■□□□ 1.1
CPNE1-217ENST00000439669 WIPI1Q5MNZ9 446 aaPredicted RBP21.91■■□□□ 1.1
CPNE1-217ENST00000439669 C1orf185Q5T7R7 199 aa21.91■■□□□ 1.1
CPNE1-217ENST00000439669 SP5Q6BEB4 398 aaPredicted RBP21.91■■□□□ 1.1
CPNE1-217ENST00000439669 B3GNT6Q6ZMB0 384 aa21.91■■□□□ 1.1
CPNE1-217ENST00000439669 ACAD11Q709F0 780 aa21.91■■□□□ 1.1
CPNE1-217ENST00000439669 YRDCQ86U90 279 aaKnown RBP21.91■■□□□ 1.1
CPNE1-217ENST00000439669 PLCZ1Q86YW0 608 aa21.91■■□□□ 1.1
CPNE1-217ENST00000439669 CDRT4Q8N9R6 151 aa21.91■■□□□ 1.1
CPNE1-217ENST00000439669 WDSUB1Q8N9V3 476 aa21.91■■□□□ 1.1
CPNE1-217ENST00000439669 FAM83FQ8NEG4 500 aaPredicted RBP21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms