RNA–Protein interactions for RNA: ENST00000438462.1

RTN4-211, Transcript of reticulon 4, humanhuman

TSL 5

Gene RTN4, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-211ENST00000438462 CTNNA2P26232 953 aa9.62□□□□□ -0.87
RTN4-211ENST00000438462 RPL22P35268 128 aaKnown RBP9.62□□□□□ -0.87
RTN4-211ENST00000438462 SERPINF1P36955 418 aa9.62□□□□□ -0.87
RTN4-211ENST00000438462 STXBP1P61764 594 aaKnown RBP9.62□□□□□ -0.87
RTN4-211ENST00000438462 IGLV3-21P80748 117 aaPredicted RBP9.62□□□□□ -0.87
RTN4-211ENST00000438462 REEP5Q00765 189 aa9.62□□□□□ -0.87
RTN4-211ENST00000438462 HMGCS1Q01581 520 aa9.62□□□□□ -0.87
RTN4-211ENST00000438462 DBPQ10586 325 aaPredicted RBP9.62□□□□□ -0.87
RTN4-211ENST00000438462 NAE1Q13564 534 aa9.62□□□□□ -0.87
RTN4-211ENST00000438462 NNATQ16517 81 aa9.62□□□□□ -0.87
RTN4-211ENST00000438462 TMEM201Q5SNT2 666 aa9.62□□□□□ -0.87
RTN4-211ENST00000438462 ZNF470Q6ECI4 717 aa9.62□□□□□ -0.87
RTN4-211ENST00000438462 ACSM5Q6NUN0 579 aa9.62□□□□□ -0.87
RTN4-211ENST00000438462 FIP1L1Q6UN15 594 aaKnown RBP9.62□□□□□ -0.87
RTN4-211ENST00000438462 ADAMTSL5Q6ZMM2 481 aa9.62□□□□□ -0.87
RTN4-211ENST00000438462 GALNT10Q86SR1 603 aa9.62□□□□□ -0.87
RTN4-211ENST00000438462 P2RY8Q86VZ1 359 aa9.62□□□□□ -0.87
RTN4-211ENST00000438462 OR52B6Q8NGF0 335 aa9.62□□□□□ -0.87
RTN4-211ENST00000438462 HAUS1Q96CS2 278 aa9.62□□□□□ -0.87
RTN4-211ENST00000438462 RBM18Q96H35 190 aaKnown RBP9.62□□□□□ -0.87
RTN4-211ENST00000438462 CATSPERZQ9NTU4 200 aa9.62□□□□□ -0.87
RTN4-211ENST00000438462 PLEK2Q9NYT0 353 aa9.62□□□□□ -0.87
RTN4-211ENST00000438462 EHD3Q9NZN3 535 aa9.62□□□□□ -0.87
RTN4-211ENST00000438462 WI2-2373I1.2A0A1W2PRP0 233 aa9.61□□□□□ -0.87
RTN4-211ENST00000438462 OR2M5A3KFT3 312 aa9.61□□□□□ -0.87
RTN4-211ENST00000438462 B9A039 149 aa9.61□□□□□ -0.87
RTN4-211ENST00000438462 HOXA3O43365 443 aaPredicted RBP9.61□□□□□ -0.87
RTN4-211ENST00000438462 UGT2B11O75310 529 aa9.61□□□□□ -0.87
RTN4-211ENST00000438462 ERLIN1O75477 346 aa9.61□□□□□ -0.87
RTN4-211ENST00000438462 SYNGR4O95473 234 aa9.61□□□□□ -0.87
RTN4-211ENST00000438462 HK1P19367 917 aa9.61□□□□□ -0.87
RTN4-211ENST00000438462 EEF1GP26641 437 aaKnown RBP9.61□□□□□ -0.87
RTN4-211ENST00000438462 SSTR4P31391 388 aa9.61□□□□□ -0.87
RTN4-211ENST00000438462 TTPAP49638 278 aa9.61□□□□□ -0.87
RTN4-211ENST00000438462 PLA2G16P53816 162 aa9.61□□□□□ -0.87
RTN4-211ENST00000438462 DSCR4P56555 118 aaPredicted RBP9.61□□□□□ -0.87
RTN4-211ENST00000438462 PRAMEP78395 509 aa9.61□□□□□ -0.87
RTN4-211ENST00000438462 SPRED3Q2MJR0 410 aa9.61□□□□□ -0.87
RTN4-211ENST00000438462 NRN1LQ496H8 165 aa9.61□□□□□ -0.87
RTN4-211ENST00000438462 CASC4Q6P4E1 433 aa9.61□□□□□ -0.87
RTN4-211ENST00000438462 Q6ZT83 130 aa9.61□□□□□ -0.87
RTN4-211ENST00000438462 ZNF571Q7Z3V5 609 aaPredicted RBP9.61□□□□□ -0.87
RTN4-211ENST00000438462 VSIG1Q86XK7 387 aa9.61□□□□□ -0.87
RTN4-211ENST00000438462 KLHDC8AQ8IYD2 350 aa9.61□□□□□ -0.87
RTN4-211ENST00000438462 TRIM58Q8NG06 486 aa9.61□□□□□ -0.87
RTN4-211ENST00000438462 OR10D3Q8NH80 312 aa9.61□□□□□ -0.87
RTN4-211ENST00000438462 LINC01006Q8NI28 216 aa9.61□□□□□ -0.87
RTN4-211ENST00000438462 ADIPOR1Q96A54 375 aa9.61□□□□□ -0.87
RTN4-211ENST00000438462 MS4A6EQ96DS6 147 aa9.61□□□□□ -0.87
RTN4-211ENST00000438462 SLC30A2Q9BRI3 323 aa9.61□□□□□ -0.87
RTN4-211ENST00000438462 HAUS8Q9BT25 410 aa9.61□□□□□ -0.87
RTN4-211ENST00000438462 C1QTNF6Q9BXI9 259 aa9.61□□□□□ -0.87
RTN4-211ENST00000438462 DDX47Q9H0S4 455 aaKnown RBP9.61□□□□□ -0.87
RTN4-211ENST00000438462 ANKZF1Q9H8Y5 726 aa9.61□□□□□ -0.87
RTN4-211ENST00000438462 TNFRSF19Q9NS68 423 aa9.61□□□□□ -0.87
RTN4-211ENST00000438462 RPUSD1Q9UJJ7 312 aaKnown RBP9.61□□□□□ -0.87
RTN4-211ENST00000438462 ANAPC5Q9UJX4 755 aa9.61□□□□□ -0.87
RTN4-211ENST00000438462 MYO6Q9UM54 1294 aa9.61□□□□□ -0.87
RTN4-211ENST00000438462 SLC25A15Q9Y619 301 aa9.61□□□□□ -0.87
RTN4-211ENST00000438462 ZBTB14O43829 449 aa9.6□□□□□ -0.87
RTN4-211ENST00000438462 XPNPEP2O43895 674 aa9.6□□□□□ -0.87
RTN4-211ENST00000438462 RAD51DO75771 328 aa9.6□□□□□ -0.87
RTN4-211ENST00000438462 PGM3O95394 542 aa9.6□□□□□ -0.87
RTN4-211ENST00000438462 LYL1P12980 280 aa9.6□□□□□ -0.87
RTN4-211ENST00000438462 CCND1P24385 295 aa9.6□□□□□ -0.87
RTN4-211ENST00000438462 RBL1P28749 1068 aa9.6□□□□□ -0.87
RTN4-211ENST00000438462 GPC1P35052 558 aa9.6□□□□□ -0.87
RTN4-211ENST00000438462 SLAMF1Q13291 335 aa9.6□□□□□ -0.87
RTN4-211ENST00000438462 RBBP5Q15291 538 aaKnown RBP9.6□□□□□ -0.87
RTN4-211ENST00000438462 ZNF311Q5JNZ3 666 aa9.6□□□□□ -0.87
RTN4-211ENST00000438462 SH2D4BQ5SQS7 431 aa9.6□□□□□ -0.87
RTN4-211ENST00000438462 AGTRAPQ6RW13 159 aa9.6□□□□□ -0.87
RTN4-211ENST00000438462 NUP54Q7Z3B4 507 aa9.6□□□□□ -0.87
RTN4-211ENST00000438462 LRRC6Q86X45 466 aa9.6□□□□□ -0.87
RTN4-211ENST00000438462 CEP112Q8N8E3 955 aa9.6□□□□□ -0.87
RTN4-211ENST00000438462 GPATCH11Q8N954 259 aa9.6□□□□□ -0.87
RTN4-211ENST00000438462 OR4K17Q8NGC6 315 aa9.6□□□□□ -0.87
RTN4-211ENST00000438462 LRRC45Q96CN5 670 aa9.6□□□□□ -0.87
RTN4-211ENST00000438462 OMA1Q96E52 524 aa9.6□□□□□ -0.87
RTN4-211ENST00000438462 ISCUQ9H1K1 167 aa9.6□□□□□ -0.87
RTN4-211ENST00000438462 PLK3Q9H4B4 646 aa9.6□□□□□ -0.87
RTN4-211ENST00000438462 HAUS4Q9H6D7 363 aa9.6□□□□□ -0.87
RTN4-211ENST00000438462 COPS7BQ9H9Q2 264 aaPredicted RBP9.6□□□□□ -0.87
RTN4-211ENST00000438462 PRSS50Q9UI38 385 aa9.6□□□□□ -0.87
RTN4-211ENST00000438462 GTF3C3Q9Y5Q9 886 aa9.6□□□□□ -0.87
RTN4-211ENST00000438462 MDFIC2A0A1B0GVS7 189 aa9.59□□□□□ -0.87
RTN4-211ENST00000438462 BTNL10A8MVZ5 291 aa9.59□□□□□ -0.87
RTN4-211ENST00000438462 KLF11O14901 512 aa9.59□□□□□ -0.87
RTN4-211ENST00000438462 CXCL13O43927 109 aa9.59□□□□□ -0.87
RTN4-211ENST00000438462 PROSCO94903 275 aa9.59□□□□□ -0.87
RTN4-211ENST00000438462 ALOX15P16050 662 aaPredicted RBP9.59□□□□□ -0.87
RTN4-211ENST00000438462 COX5AP20674 150 aa9.59□□□□□ -0.87
RTN4-211ENST00000438462 IGHV1-2P23083 117 aa9.59□□□□□ -0.87
RTN4-211ENST00000438462 GATA3P23771 443 aa9.59□□□□□ -0.87
RTN4-211ENST00000438462 GRK2P25098 689 aa9.59□□□□□ -0.87
RTN4-211ENST00000438462 NPY2RP49146 381 aa9.59□□□□□ -0.87
RTN4-211ENST00000438462 DUSP2Q05923 314 aa9.59□□□□□ -0.87
RTN4-211ENST00000438462 CUL1Q13616 776 aa9.59□□□□□ -0.87
RTN4-211ENST00000438462 TCP11X2Q5H9J9 407 aa9.59□□□□□ -0.87
RTN4-211ENST00000438462 KLF17Q5JT82 389 aaPredicted RBP9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms