RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 ZNF350Q9GZX5 532 aa23.99■■□□□ 1.43
CPNE1-216ENST00000437340 THADAQ6YHU6 1953 aa23.99■■□□□ 1.43
CPNE1-216ENST00000437340 USP34Q70CQ2 3546 aa23.99■■□□□ 1.43
CPNE1-216ENST00000437340 EPHA4P54764 986 aa23.98■■□□□ 1.43
CPNE1-216ENST00000437340 TAS2R41P59536 307 aa23.98■■□□□ 1.43
CPNE1-216ENST00000437340 LARS2Q15031 903 aaKnown RBP23.98■■□□□ 1.43
CPNE1-216ENST00000437340 GARNL3Q5VVW2 1013 aa23.98■■□□□ 1.43
CPNE1-216ENST00000437340 SLX4IPQ5VYV7 408 aa23.98■■□□□ 1.43
CPNE1-216ENST00000437340 C1orf94Q6P1W5 598 aa23.98■■□□□ 1.43
CPNE1-216ENST00000437340 DNASE2BQ8WZ79 361 aa23.98■■□□□ 1.43
CPNE1-216ENST00000437340 FCGR1BQ92637 280 aa23.98■■□□□ 1.43
CPNE1-216ENST00000437340 PMM1Q92871 262 aa23.98■■□□□ 1.43
CPNE1-216ENST00000437340 EPHA6Q9UF33 1036 aa23.98■■□□□ 1.43
CPNE1-216ENST00000437340 MKLN1Q9UL63 735 aa23.98■■□□□ 1.43
CPNE1-216ENST00000437340 ZNF443Q9Y2A4 671 aaPredicted RBP23.98■■□□□ 1.43
CPNE1-216ENST00000437340 TMEM131Q92545 1883 aa23.98■■□□□ 1.43
CPNE1-216ENST00000437340 CTSBP07858 339 aa23.98■■□□□ 1.43
CPNE1-216ENST00000437340 THBS1P07996 1170 aa23.98■■□□□ 1.43
CPNE1-216ENST00000437340 RNH1P13489 461 aaKnown RBP23.98■■□□□ 1.43
CPNE1-216ENST00000437340 CNR2P34972 360 aa23.98■■□□□ 1.43
CPNE1-216ENST00000437340 MAP3K8P41279 467 aa23.98■■□□□ 1.43
CPNE1-216ENST00000437340 MAP2K4P45985 399 aa23.98■■□□□ 1.43
CPNE1-216ENST00000437340 DUSP8Q13202 625 aa23.98■■□□□ 1.43
CPNE1-216ENST00000437340 C14orf28Q4W4Y0 310 aa23.98■■□□□ 1.43
CPNE1-216ENST00000437340 GGHQ92820 318 aa23.98■■□□□ 1.43
CPNE1-216ENST00000437340 SLC38A4Q969I6 547 aa23.98■■□□□ 1.43
CPNE1-216ENST00000437340 SAP130Q9H0E3 1048 aa23.98■■□□□ 1.43
CPNE1-216ENST00000437340 PRMT8Q9NR22 394 aaPredicted RBP23.98■■□□□ 1.43
CPNE1-216ENST00000437340 ENPP5Q9UJA9 477 aa23.98■■□□□ 1.43
CPNE1-216ENST00000437340 PLCL2Q9UPR0 1127 aa23.98■■□□□ 1.43
CPNE1-216ENST00000437340 BDP1A6H8Y1 2624 aa23.98■■□□□ 1.43
CPNE1-216ENST00000437340 TLCD2A6NGC4 264 aa23.97■■□□□ 1.43
CPNE1-216ENST00000437340 POU1F1P28069 291 aa23.97■■□□□ 1.43
CPNE1-216ENST00000437340 GABRA4P48169 554 aa23.97■■□□□ 1.43
CPNE1-216ENST00000437340 ST3GAL3Q11203 375 aa23.97■■□□□ 1.43
CPNE1-216ENST00000437340 EIPR1Q53HC9 387 aa23.97■■□□□ 1.43
CPNE1-216ENST00000437340 PTCHD4Q6ZW05 846 aa23.97■■□□□ 1.43
CPNE1-216ENST00000437340 ZER1Q7Z7L7 766 aa23.97■■□□□ 1.43
CPNE1-216ENST00000437340 SHISA5Q8N114 240 aa23.97■■□□□ 1.43
CPNE1-216ENST00000437340 TRUB1Q8WWH5 349 aaKnown RBP23.97■■□□□ 1.43
CPNE1-216ENST00000437340 DIO2Q92813 273 aa23.97■■□□□ 1.43
CPNE1-216ENST00000437340 DCUN1D5Q9BTE7 237 aa23.97■■□□□ 1.43
CPNE1-216ENST00000437340 MRPS33Q9Y291 106 aaKnown RBP23.97■■□□□ 1.43
CPNE1-216ENST00000437340 GPR55Q9Y2T6 319 aaPredicted RBP23.97■■□□□ 1.43
CPNE1-216ENST00000437340 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa23.96■■□□□ 1.43
CPNE1-216ENST00000437340 A0A1W2PPW3 197 aa23.96■■□□□ 1.43
CPNE1-216ENST00000437340 CYP7B1O75881 506 aa23.96■■□□□ 1.43
CPNE1-216ENST00000437340 NSA2O95478 260 aaKnown RBP23.96■■□□□ 1.43
CPNE1-216ENST00000437340 FADS2O95864 444 aaKnown RBP23.96■■□□□ 1.43
CPNE1-216ENST00000437340 CDK1P06493 297 aa23.96■■□□□ 1.43
CPNE1-216ENST00000437340 CCNYL3P0C7X3 344 aa23.96■■□□□ 1.43
CPNE1-216ENST00000437340 GSTM3P21266 225 aa23.96■■□□□ 1.43
CPNE1-216ENST00000437340 IFNGR2P38484 337 aa23.96■■□□□ 1.43
CPNE1-216ENST00000437340 FNTBP49356 437 aa23.96■■□□□ 1.43
CPNE1-216ENST00000437340 ST13P50502 369 aaKnown RBP23.96■■□□□ 1.43
CPNE1-216ENST00000437340 SNRPGP62308 76 aaKnown RBP23.96■■□□□ 1.43
CPNE1-216ENST00000437340 MAP4K2Q12851 820 aa23.96■■□□□ 1.43
CPNE1-216ENST00000437340 NFATC3Q12968 1075 aa23.96■■□□□ 1.43
CPNE1-216ENST00000437340 TRAM2Q15035 370 aa23.96■■□□□ 1.43
CPNE1-216ENST00000437340 DEFB133Q30KQ1 61 aa23.96■■□□□ 1.43
CPNE1-216ENST00000437340 DCST2Q5T1A1 773 aa23.96■■□□□ 1.43
CPNE1-216ENST00000437340 UBE2UQ5VVX9 321 aa23.96■■□□□ 1.43
CPNE1-216ENST00000437340 TMEM236Q5W0B7 351 aa23.96■■□□□ 1.43
CPNE1-216ENST00000437340 NLGN4XQ8N0W4 816 aa23.96■■□□□ 1.43
CPNE1-216ENST00000437340 ZNF619Q8N2I2 560 aa23.96■■□□□ 1.43
CPNE1-216ENST00000437340 CD180Q99467 661 aa23.96■■□□□ 1.43
CPNE1-216ENST00000437340 CLN6Q9NWW5 311 aa23.96■■□□□ 1.43
CPNE1-216ENST00000437340 A0A0A6YYC8 382 aaPredicted RBP23.96■■□□□ 1.43
CPNE1-216ENST00000437340 AGAP5A6NIR3 686 aa23.96■■□□□ 1.43
CPNE1-216ENST00000437340 I3L1I5 382 aaPredicted RBP23.96■■□□□ 1.43
CPNE1-216ENST00000437340 AP3D1O14617 1153 aa23.96■■□□□ 1.43
CPNE1-216ENST00000437340 FOXS1O43638 330 aa23.96■■□□□ 1.43
CPNE1-216ENST00000437340 COQ9O75208 318 aa23.96■■□□□ 1.43
CPNE1-216ENST00000437340 STX11O75558 287 aa23.96■■□□□ 1.43
CPNE1-216ENST00000437340 PIAS2O75928 621 aa23.96■■□□□ 1.43
CPNE1-216ENST00000437340 TDGF1P13385 188 aa23.96■■□□□ 1.43
CPNE1-216ENST00000437340 MMP11P24347 488 aa23.96■■□□□ 1.43
CPNE1-216ENST00000437340 HOXA6P31267 233 aa23.96■■□□□ 1.43
CPNE1-216ENST00000437340 RGS8P57771 180 aaPredicted RBP23.96■■□□□ 1.43
CPNE1-216ENST00000437340 TBCEQ15813 527 aaPredicted RBP23.96■■□□□ 1.43
CPNE1-216ENST00000437340 TCTE1Q5JU00 501 aa23.96■■□□□ 1.43
CPNE1-216ENST00000437340 ENTPD8Q5MY95 495 aa23.96■■□□□ 1.43
CPNE1-216ENST00000437340 AP1ARQ63HQ0 302 aa23.96■■□□□ 1.43
CPNE1-216ENST00000437340 C12orf73Q69YU5 71 aa23.96■■□□□ 1.43
CPNE1-216ENST00000437340 CCDC81Q6ZN84 652 aa23.96■■□□□ 1.43
CPNE1-216ENST00000437340 SLC16A12Q6ZSM3 486 aa23.96■■□□□ 1.43
CPNE1-216ENST00000437340 ZNF595Q8IYB9 648 aa23.96■■□□□ 1.43
CPNE1-216ENST00000437340 CLIP4Q8N3C7 705 aa23.96■■□□□ 1.43
CPNE1-216ENST00000437340 COX18Q8N8Q8 333 aa23.96■■□□□ 1.43
CPNE1-216ENST00000437340 HOXB13Q92826 284 aaPredicted RBP23.96■■□□□ 1.43
CPNE1-216ENST00000437340 ZDHHC12Q96GR4 267 aa23.96■■□□□ 1.43
CPNE1-216ENST00000437340 TMEM221A6NGB7 291 aa23.95■■□□□ 1.42
CPNE1-216ENST00000437340 H3BN98 237 aa23.95■■□□□ 1.42
CPNE1-216ENST00000437340 M0R296 226 aa23.95■■□□□ 1.42
CPNE1-216ENST00000437340 TPST2O60704 377 aa23.95■■□□□ 1.42
CPNE1-216ENST00000437340 TP53P04637 393 aaPredicted RBP23.95■■□□□ 1.42
CPNE1-216ENST00000437340 CT62P0C5K7 136 aa23.95■■□□□ 1.42
CPNE1-216ENST00000437340 RPS4Y1P22090 263 aaKnown RBP23.95■■□□□ 1.42
CPNE1-216ENST00000437340 MLLT3P42568 568 aaPredicted RBP23.95■■□□□ 1.42
CPNE1-216ENST00000437340 VWA5B2Q8N398 1253 aa23.95■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms