RNA–Protein interactions for RNA: ENST00000437242.1

HMGB1P31-201, Transcript of high mobility group box 1 pseudogene 31, humanhuman

BASIC

Gene HMGB1P31, Length 427 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P31-201ENST00000437242 FBP2O00757 339 aa2.22□□□□□ -2.05
HMGB1P31-201ENST00000437242 B4GAT1O43505 415 aa2.22□□□□□ -2.05
HMGB1P31-201ENST00000437242 NME2P1O60361 137 aa2.22□□□□□ -2.05
HMGB1P31-201ENST00000437242 TSPAN2O60636 221 aa2.22□□□□□ -2.05
HMGB1P31-201ENST00000437242 HSF2BPO75031 334 aa2.22□□□□□ -2.05
HMGB1P31-201ENST00000437242 CXCL14O95715 111 aa2.22□□□□□ -2.05
HMGB1P31-201ENST00000437242 TXNDC12O95881 172 aa2.22□□□□□ -2.05
HMGB1P31-201ENST00000437242 IGHG1P01857 330 aa2.22□□□□□ -2.05
HMGB1P31-201ENST00000437242 APRTP07741 180 aa2.22□□□□□ -2.05
HMGB1P31-201ENST00000437242 FHP07954 510 aa2.22□□□□□ -2.05
HMGB1P31-201ENST00000437242 TPBGLP0DKB5 382 aa2.22□□□□□ -2.05
HMGB1P31-201ENST00000437242 ZNF32P17041 273 aa2.22□□□□□ -2.05
HMGB1P31-201ENST00000437242 TNFRSF4P43489 277 aa2.22□□□□□ -2.05
HMGB1P31-201ENST00000437242 RIDAP52758 137 aaKnown RBP2.22□□□□□ -2.05
HMGB1P31-201ENST00000437242 GEMP55040 296 aa2.22□□□□□ -2.05
HMGB1P31-201ENST00000437242 PPP1R8Q12972 351 aaKnown RBP2.22□□□□□ -2.05
HMGB1P31-201ENST00000437242 PPP2R5CQ13362 524 aa2.22□□□□□ -2.05
HMGB1P31-201ENST00000437242 KRT31Q15323 416 aa2.22□□□□□ -2.05
HMGB1P31-201ENST00000437242 ECSCRQ19T08 205 aa2.22□□□□□ -2.05
HMGB1P31-201ENST00000437242 POM121L1PQ3SYA9 428 aa2.22□□□□□ -2.05
HMGB1P31-201ENST00000437242 MUC21Q5SSG8 566 aa2.22□□□□□ -2.05
HMGB1P31-201ENST00000437242 MARC1Q5VT66 337 aa2.22□□□□□ -2.05
HMGB1P31-201ENST00000437242 NKAIN2Q5VXU1 208 aa2.22□□□□□ -2.05
HMGB1P31-201ENST00000437242 NEPROQ6NW34 567 aa2.22□□□□□ -2.05
HMGB1P31-201ENST00000437242 DLEU7Q6UYE1 221 aa2.22□□□□□ -2.05
HMGB1P31-201ENST00000437242 ZNF730Q6ZMV8 503 aa2.22□□□□□ -2.05
HMGB1P31-201ENST00000437242 Q6ZRG5 221 aa2.22□□□□□ -2.05
HMGB1P31-201ENST00000437242 COLGALT1Q8NBJ5 622 aa2.22□□□□□ -2.05
HMGB1P31-201ENST00000437242 ICA1LQ8NDH6 482 aa2.22□□□□□ -2.05
HMGB1P31-201ENST00000437242 BEST4Q8NFU0 473 aa2.22□□□□□ -2.05
HMGB1P31-201ENST00000437242 MGARPQ8TDB4 240 aa2.22□□□□□ -2.05
HMGB1P31-201ENST00000437242 U2AF1L4Q8WU68 220 aaKnown RBP2.22□□□□□ -2.05
HMGB1P31-201ENST00000437242 PCNPQ8WW12 178 aaKnown RBP2.22□□□□□ -2.05
HMGB1P31-201ENST00000437242 PCED1BQ96HM7 432 aa2.22□□□□□ -2.05
HMGB1P31-201ENST00000437242 RPGRIP1Q96KN7 1286 aa2.22□□□□□ -2.05
HMGB1P31-201ENST00000437242 RUNDC3BQ96NL0 473 aa2.22□□□□□ -2.05
HMGB1P31-201ENST00000437242 THAP9Q9H5L6 903 aa2.22□□□□□ -2.05
HMGB1P31-201ENST00000437242 DCLRE1BQ9H816 532 aa2.22□□□□□ -2.05
HMGB1P31-201ENST00000437242 WDR41Q9HAD4 459 aa2.22□□□□□ -2.05
HMGB1P31-201ENST00000437242 PLEKHA3Q9HB20 300 aa2.22□□□□□ -2.05
HMGB1P31-201ENST00000437242 KCNMB3Q9NPA1 279 aa2.22□□□□□ -2.05
HMGB1P31-201ENST00000437242 DEPPQ9NTK1 212 aa2.22□□□□□ -2.05
HMGB1P31-201ENST00000437242 DDX28Q9NUL7 540 aaKnown RBP2.22□□□□□ -2.05
HMGB1P31-201ENST00000437242 VPS54Q9P1Q0 977 aa2.22□□□□□ -2.05
HMGB1P31-201ENST00000437242 CIDEBQ9UHD4 219 aa2.22□□□□□ -2.05
HMGB1P31-201ENST00000437242 MOSPD1Q9UJG1 213 aa2.22□□□□□ -2.05
HMGB1P31-201ENST00000437242 MRTO4Q9UKD2 239 aaKnown RBP2.22□□□□□ -2.05
HMGB1P31-201ENST00000437242 SPATA2Q9UM82 520 aa2.22□□□□□ -2.05
HMGB1P31-201ENST00000437242 AUP1Q9Y679 476 aa2.22□□□□□ -2.05
HMGB1P31-201ENST00000437242 SIPA1L3O60292 1781 aaPredicted RBP2.22□□□□□ -2.05
HMGB1P31-201ENST00000437242 SPTBN5Q9NRC6 3674 aaKnown RBP2.21□□□□□ -2.06
HMGB1P31-201ENST00000437242 TTC21AQ8NDW8 1320 aa2.21□□□□□ -2.06
HMGB1P31-201ENST00000437242 USP42Q9H9J4 1324 aaKnown RBP2.21□□□□□ -2.06
HMGB1P31-201ENST00000437242 IGHV3-16A0A0C4DH30 117 aa2.21□□□□□ -2.06
HMGB1P31-201ENST00000437242 TRBV5-4A0A0C4DH59 114 aa2.21□□□□□ -2.06
HMGB1P31-201ENST00000437242 IGLON5A6NGN9 336 aa2.21□□□□□ -2.06
HMGB1P31-201ENST00000437242 YJEFN3A6XGL0 299 aa2.21□□□□□ -2.06
HMGB1P31-201ENST00000437242 ZNF724A8MTY0 619 aa2.21□□□□□ -2.06
HMGB1P31-201ENST00000437242 MEI4A8MW99 385 aa2.21□□□□□ -2.06
HMGB1P31-201ENST00000437242 K7EQG2 157 aa2.21□□□□□ -2.06
HMGB1P31-201ENST00000437242 TLR4O00206 839 aa2.21□□□□□ -2.06
HMGB1P31-201ENST00000437242 HTATSF1O43719 755 aaKnown RBP2.21□□□□□ -2.06
HMGB1P31-201ENST00000437242 ATP6V1G1O75348 118 aa2.21□□□□□ -2.06
HMGB1P31-201ENST00000437242 FRAT2O75474 233 aaPredicted RBP2.21□□□□□ -2.06
HMGB1P31-201ENST00000437242 OR6A2O95222 327 aa2.21□□□□□ -2.06
HMGB1P31-201ENST00000437242 MT-ND1P03886 318 aa2.21□□□□□ -2.06
HMGB1P31-201ENST00000437242 MT-ND3P03897 115 aa2.21□□□□□ -2.06
HMGB1P31-201ENST00000437242 FCER2P06734 321 aa2.21□□□□□ -2.06
HMGB1P31-201ENST00000437242 HIST1H2AGP0C0S8 130 aaPredicted RBP2.21□□□□□ -2.06
HMGB1P31-201ENST00000437242 B4GALT1P15291 398 aa2.21□□□□□ -2.06
HMGB1P31-201ENST00000437242 CD1DP15813 335 aa2.21□□□□□ -2.06
HMGB1P31-201ENST00000437242 IL10P22301 178 aa2.21□□□□□ -2.06
HMGB1P31-201ENST00000437242 ATP6V1E1P36543 226 aa2.21□□□□□ -2.06
HMGB1P31-201ENST00000437242 NUMBP49757 651 aa2.21□□□□□ -2.06
HMGB1P31-201ENST00000437242 CNN1P51911 297 aaKnown RBP2.21□□□□□ -2.06
HMGB1P31-201ENST00000437242 STARD6P59095 220 aa2.21□□□□□ -2.06
HMGB1P31-201ENST00000437242 RPL27P61353 136 aaKnown RBP2.21□□□□□ -2.06
HMGB1P31-201ENST00000437242 HERV-K104P63124 156 aa2.21□□□□□ -2.06
HMGB1P31-201ENST00000437242 GFPT1Q06210 699 aaPredicted RBP2.21□□□□□ -2.06
HMGB1P31-201ENST00000437242 EXOSC7Q15024 291 aaKnown RBP2.21□□□□□ -2.06
HMGB1P31-201ENST00000437242 HAGHQ16775 308 aa2.21□□□□□ -2.06
HMGB1P31-201ENST00000437242 SHROOM1Q2M3G4 852 aaPredicted RBP2.21□□□□□ -2.06
HMGB1P31-201ENST00000437242 DEFB115Q30KQ5 88 aa2.21□□□□□ -2.06
HMGB1P31-201ENST00000437242 HIST2H2AA3Q6FI13 130 aa2.21□□□□□ -2.06
HMGB1P31-201ENST00000437242 RTL6Q6ICC9 239 aa2.21□□□□□ -2.06
HMGB1P31-201ENST00000437242 CDC42EP5Q6NZY7 148 aa2.21□□□□□ -2.06
HMGB1P31-201ENST00000437242 TATDN1Q6P1N9 297 aa2.21□□□□□ -2.06
HMGB1P31-201ENST00000437242 NEK5Q6P3R8 708 aa2.21□□□□□ -2.06
HMGB1P31-201ENST00000437242 MCM10Q7L590 875 aa2.21□□□□□ -2.06
HMGB1P31-201ENST00000437242 MIER3Q7Z3K6 550 aa2.21□□□□□ -2.06
HMGB1P31-201ENST00000437242 NUFIP2Q7Z417 695 aaKnown RBP2.21□□□□□ -2.06
HMGB1P31-201ENST00000437242 ITIH5Q86UX2 942 aa2.21□□□□□ -2.06
HMGB1P31-201ENST00000437242 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.21□□□□□ -2.06
HMGB1P31-201ENST00000437242 HSCBQ8IWL3 235 aa2.21□□□□□ -2.06
HMGB1P31-201ENST00000437242 BATF2Q8N1L9 274 aa2.21□□□□□ -2.06
HMGB1P31-201ENST00000437242 BANPQ8N9N5 519 aa2.21□□□□□ -2.06
HMGB1P31-201ENST00000437242 LEMD2Q8NC56 503 aa2.21□□□□□ -2.06
HMGB1P31-201ENST00000437242 OR1B1Q8NGR6 318 aa2.21□□□□□ -2.06
HMGB1P31-201ENST00000437242 OR4L1Q8NH43 312 aa2.21□□□□□ -2.06
HMGB1P31-201ENST00000437242 EXOC6Q8TAG9 804 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms