RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 OR8K3Q8NH51 312 aa21.32■■□□□ 1
CPSF4-204ENST00000436336 LCORQ96JN0 433 aaPredicted RBP21.32■■□□□ 1
CPSF4-204ENST00000436336 WWTR1Q9GZV5 400 aa21.32■■□□□ 1
CPSF4-204ENST00000436336 GPN2Q9H9Y4 310 aaPredicted RBP21.32■■□□□ 1
CPSF4-204ENST00000436336 RPS6KA6Q9UK32 745 aa21.32■■□□□ 1
CPSF4-204ENST00000436336 SAMD4AQ9UPU9 718 aaKnown RBP21.32■■□□□ 1
CPSF4-204ENST00000436336 GXYLT2A0PJZ3 443 aa21.31■■□□□ 1
CPSF4-204ENST00000436336 FRG2CA6NGY1 282 aa21.31■■□□□ 1
CPSF4-204ENST00000436336 M0QX08 132 aa21.31■■□□□ 1
CPSF4-204ENST00000436336 MGRN1O60291 552 aa21.31■■□□□ 1
CPSF4-204ENST00000436336 FKBP6O75344 327 aa21.31■■□□□ 1
CPSF4-204ENST00000436336 IFNA14P01570 189 aa21.31■■□□□ 1
CPSF4-204ENST00000436336 MRPS22P82650 360 aaKnown RBP21.31■■□□□ 1
CPSF4-204ENST00000436336 CBLL1Q75N03 491 aa21.31■■□□□ 1
CPSF4-204ENST00000436336 RAB43Q86YS6 212 aa21.31■■□□□ 1
CPSF4-204ENST00000436336 RNF145Q96MT1 663 aa21.31■■□□□ 1
CPSF4-204ENST00000436336 GAL3ST4Q96RP7 486 aa21.31■■□□□ 1
CPSF4-204ENST00000436336 ZNF607Q96SK3 696 aa21.31■■□□□ 1
CPSF4-204ENST00000436336 SLC38A1Q9H2H9 487 aa21.31■■□□□ 1
CPSF4-204ENST00000436336 OR10H1Q9Y4A9 318 aa21.31■■□□□ 1
CPSF4-204ENST00000436336 MRPS18BQ9Y676 258 aaKnown RBP21.31■■□□□ 1
CPSF4-204ENST00000436336 NSG1A0A0A6YYJ2 146 aa21.3■■□□□ 1
CPSF4-204ENST00000436336 KCNK2O95069 426 aa21.3■■□□□ 1
CPSF4-204ENST00000436336 GPIP06744 558 aa21.3■■□□□ 1
CPSF4-204ENST00000436336 ETS2P15036 469 aa21.3■■□□□ 1
CPSF4-204ENST00000436336 CRYBA2P53672 197 aa21.3■■□□□ 1
CPSF4-204ENST00000436336 IL10RAQ13651 578 aa21.3■■□□□ 1
CPSF4-204ENST00000436336 TGIF1Q15583 401 aa21.3■■□□□ 1
CPSF4-204ENST00000436336 BTBD16Q32M84 506 aa21.3■■□□□ 1
CPSF4-204ENST00000436336 PLAG1Q6DJT9 500 aa21.3■■□□□ 1
CPSF4-204ENST00000436336 GALNT10Q86SR1 603 aa21.3■■□□□ 1
CPSF4-204ENST00000436336 KRT73Q86Y46 540 aa21.3■■□□□ 1
CPSF4-204ENST00000436336 ZSCAN1Q8NBB4 408 aa21.3■■□□□ 1
CPSF4-204ENST00000436336 NUBPLQ8TB37 319 aa21.3■■□□□ 1
CPSF4-204ENST00000436336 M1APQ8TC57 530 aa21.3■■□□□ 1
CPSF4-204ENST00000436336 DUS3LQ96G46 650 aaKnown RBP21.3■■□□□ 1
CPSF4-204ENST00000436336 RMND5BQ96G75 393 aaPredicted RBP21.3■■□□□ 1
CPSF4-204ENST00000436336 EFHD1Q9BUP0 239 aa21.3■■□□□ 1
CPSF4-204ENST00000436336 ZNF350Q9GZX5 532 aa21.3■■□□□ 1
CPSF4-204ENST00000436336 NXF5Q9H1B4 397 aaKnown RBP21.3■■□□□ 1
CPSF4-204ENST00000436336 IL17BQ9UHF5 180 aa21.3■■□□□ 1
CPSF4-204ENST00000436336 CBLCQ9ULV8 474 aa21.3■■□□□ 1
CPSF4-204ENST00000436336 DSPPQ9NZW4 1301 aa21.3■■□□□ 1
CPSF4-204ENST00000436336 TRBV11-1A0A0K0K1C0 115 aa21.29■■□□□ 1
CPSF4-204ENST00000436336 DHRS12A0PJE2 317 aa21.29■■□□□ 1
CPSF4-204ENST00000436336 STX11O75558 287 aa21.29■■□□□ 1
CPSF4-204ENST00000436336 GUSBP08236 651 aa21.29■■□□□ 1
CPSF4-204ENST00000436336 PIGAP37287 484 aa21.29■■□□□ 1
CPSF4-204ENST00000436336 CHRNEQ04844 493 aa21.29■■□□□ 1
CPSF4-204ENST00000436336 RIPK1Q13546 671 aa21.29■■□□□ 1
CPSF4-204ENST00000436336 NNATQ16517 81 aa21.29■■□□□ 1
CPSF4-204ENST00000436336 TBC1D25Q3MII6 688 aa21.29■■□□□ 1
CPSF4-204ENST00000436336 CYP27C1Q4G0S4 372 aa21.29■■□□□ 1
CPSF4-204ENST00000436336 CCNJQ5T5M9 372 aa21.29■■□□□ 1
CPSF4-204ENST00000436336 AAGABQ6PD74 315 aa21.29■■□□□ 1
CPSF4-204ENST00000436336 EIF3MQ7L2H7 374 aaKnown RBP21.29■■□□□ 1
CPSF4-204ENST00000436336 ZNF441Q8N8Z8 693 aa21.29■■□□□ 1
CPSF4-204ENST00000436336 OR4N2Q8NGD1 307 aa21.29■■□□□ 1
CPSF4-204ENST00000436336 FAM110BQ8TC76 370 aa21.29■■□□□ 1
CPSF4-204ENST00000436336 ELP5Q8TE02 316 aa21.29■■□□□ 1
CPSF4-204ENST00000436336 TP53INP1Q96A56 240 aa21.29■■□□□ 1
CPSF4-204ENST00000436336 FAM122AQ96E09 287 aa21.29■■□□□ 1
CPSF4-204ENST00000436336 SCNM1Q9BWG6 230 aa21.29■■□□□ 1
CPSF4-204ENST00000436336 POLE3Q9NRF9 147 aa21.29■■□□□ 1
CPSF4-204ENST00000436336 ADPRHL2Q9NX46 363 aa21.29■■□□□ 1
CPSF4-204ENST00000436336 WASF3Q9UPY6 502 aa21.29■■□□□ 1
CPSF4-204ENST00000436336 WDR45Q9Y484 360 aa21.29■■□□□ 1
CPSF4-204ENST00000436336 GPC6Q9Y625 555 aaPredicted RBP21.29■■□□□ 1
CPSF4-204ENST00000436336 SERPINB7O75635 380 aa21.29■■□□□ 1
CPSF4-204ENST00000436336 PSMA4P25789 261 aaKnown RBP21.29■■□□□ 1
CPSF4-204ENST00000436336 PSPHP78330 225 aa21.29■■□□□ 1
CPSF4-204ENST00000436336 CYBRD1Q53TN4 286 aa21.29■■□□□ 1
CPSF4-204ENST00000436336 AP1ARQ63HQ0 302 aa21.29■■□□□ 1
CPSF4-204ENST00000436336 TYW3Q6IPR3 259 aaKnown RBP21.29■■□□□ 1
CPSF4-204ENST00000436336 ZFP1Q6P2D0 407 aa21.29■■□□□ 1
CPSF4-204ENST00000436336 FIGNL1Q6PIW4 674 aa21.29■■□□□ 1
CPSF4-204ENST00000436336 FRRS1Q6ZNA5 592 aa21.29■■□□□ 1
CPSF4-204ENST00000436336 OLIG3Q7RTU3 272 aa21.29■■□□□ 1
CPSF4-204ENST00000436336 AMER2Q8N7J2 671 aa21.29■■□□□ 1
CPSF4-204ENST00000436336 OR5L2Q8NGL0 311 aa21.29■■□□□ 1
CPSF4-204ENST00000436336 CANT1Q8WVQ1 401 aa21.29■■□□□ 1
CPSF4-204ENST00000436336 TAMM41Q96BW9 452 aa21.29■■□□□ 1
CPSF4-204ENST00000436336 SPATA5L1Q9BVQ7 753 aa21.29■■□□□ 1
CPSF4-204ENST00000436336 SAP130Q9H0E3 1048 aa21.29■■□□□ 1
CPSF4-204ENST00000436336 MMP25Q9NPA2 562 aa21.29■■□□□ 1
CPSF4-204ENST00000436336 ANAPC2Q9UJX6 822 aa21.29■■□□□ 1
CPSF4-204ENST00000436336 EXPH5Q8NEV8 1989 aa21.29■■□□□ 1
CPSF4-204ENST00000436336 PCSK5Q92824 1860 aa21.28■■□□□ 1
CPSF4-204ENST00000436336 TO15178 435 aa21.28■■□□□ 1
CPSF4-204ENST00000436336 ACOX3O15254 700 aa21.28■■□□□ 1
CPSF4-204ENST00000436336 PRKNO60260 465 aaPredicted RBP21.28■■□□□ 1
CPSF4-204ENST00000436336 FCMRO60667 390 aa21.28■■□□□ 1
CPSF4-204ENST00000436336 ZFAND5O76080 213 aa21.28■■□□□ 1
CPSF4-204ENST00000436336 ZNF682O95780 498 aa21.28■■□□□ 1
CPSF4-204ENST00000436336 HPP00738 406 aa21.28■■□□□ 1
CPSF4-204ENST00000436336 MRGPREQ86SM8 312 aa21.28■■□□□ 1
CPSF4-204ENST00000436336 ADGRG5Q8IZF4 528 aa21.28■■□□□ 1
CPSF4-204ENST00000436336 ADAMTS17Q8TE56 1095 aa21.28■■□□□ 1
CPSF4-204ENST00000436336 RASSF5Q8WWW0 418 aa21.28■■□□□ 1
CPSF4-204ENST00000436336 PYDC1Q8WXC3 89 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms