RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 AP3D1O14617 1153 aa12□□□□□ -0.49
DDX56-204ENST00000431640 MAN1A2O60476 641 aa12□□□□□ -0.49
DDX56-204ENST00000431640 CYP7B1O75881 506 aa12□□□□□ -0.49
DDX56-204ENST00000431640 ZBTB11O95625 1053 aaPredicted RBP12□□□□□ -0.49
DDX56-204ENST00000431640 GPR75O95800 540 aa12□□□□□ -0.49
DDX56-204ENST00000431640 EPPINO95925 133 aa12□□□□□ -0.49
DDX56-204ENST00000431640 EIF2S1P05198 315 aaKnown RBP12□□□□□ -0.49
DDX56-204ENST00000431640 CELA2BP08218 269 aaPredicted RBP12□□□□□ -0.49
DDX56-204ENST00000431640 STSP08842 583 aa12□□□□□ -0.49
DDX56-204ENST00000431640 CCNYL3P0C7X3 344 aa12□□□□□ -0.49
DDX56-204ENST00000431640 FUT4P22083 530 aa12□□□□□ -0.49
DDX56-204ENST00000431640 ALDH4A1P30038 563 aa12□□□□□ -0.49
DDX56-204ENST00000431640 BMXP51813 675 aa12□□□□□ -0.49
DDX56-204ENST00000431640 TAS2R41P59536 307 aa12□□□□□ -0.49
DDX56-204ENST00000431640 BNC1Q01954 994 aa12□□□□□ -0.49
DDX56-204ENST00000431640 KHDRBS1Q07666 443 aaKnown RBP eCLIP12□□□□□ -0.49
DDX56-204ENST00000431640 ZNF846Q147U1 533 aa12□□□□□ -0.49
DDX56-204ENST00000431640 LARS2Q15031 903 aaKnown RBP12□□□□□ -0.49
DDX56-204ENST00000431640 ZNF542PQ5EBM4 170 aa12□□□□□ -0.49
DDX56-204ENST00000431640 SLC25A30Q5SVS4 291 aa12□□□□□ -0.49
DDX56-204ENST00000431640 PLAG1Q6DJT9 500 aa12□□□□□ -0.49
DDX56-204ENST00000431640 NIPAL1Q6NVV3 410 aa12□□□□□ -0.49
DDX56-204ENST00000431640 RRM2BQ7LG56 351 aa12□□□□□ -0.49
DDX56-204ENST00000431640 ZNF367Q7RTV3 350 aa12□□□□□ -0.49
DDX56-204ENST00000431640 MORN4Q8NDC4 146 aa12□□□□□ -0.49
DDX56-204ENST00000431640 OR7G2Q8NG99 324 aa12□□□□□ -0.49
DDX56-204ENST00000431640 WFDC6Q9BQY6 131 aa12□□□□□ -0.49
DDX56-204ENST00000431640 POLR2J2Q9GZM3 115 aaKnown RBP12□□□□□ -0.49
DDX56-204ENST00000431640 SEMA6CQ9H3T2 930 aa12□□□□□ -0.49
DDX56-204ENST00000431640 PIGUQ9H490 435 aa12□□□□□ -0.49
DDX56-204ENST00000431640 EVA1AQ9H8M9 152 aa12□□□□□ -0.49
DDX56-204ENST00000431640 SLC25A19Q9HC21 320 aa12□□□□□ -0.49
DDX56-204ENST00000431640 SPAG17Q6Q759 2223 aa11.99□□□□□ -0.49
DDX56-204ENST00000431640 A0A1W2PS29 197 aa11.99□□□□□ -0.49
DDX56-204ENST00000431640 GALR3O60755 368 aaPredicted RBP11.99□□□□□ -0.49
DDX56-204ENST00000431640 AK1P00568 194 aa11.99□□□□□ -0.49
DDX56-204ENST00000431640 ATP1B1P05026 303 aa11.99□□□□□ -0.49
DDX56-204ENST00000431640 NR4A1P22736 598 aa11.99□□□□□ -0.49
DDX56-204ENST00000431640 PTGER1P34995 402 aa11.99□□□□□ -0.49
DDX56-204ENST00000431640 TGFBR2P37173 567 aa11.99□□□□□ -0.49
DDX56-204ENST00000431640 SLC15A1P46059 708 aa11.99□□□□□ -0.49
DDX56-204ENST00000431640 CLK1P49759 484 aaKnown RBP11.99□□□□□ -0.49
DDX56-204ENST00000431640 NUDT6P53370 316 aa11.99□□□□□ -0.49
DDX56-204ENST00000431640 SKP1P63208 163 aa11.99□□□□□ -0.49
DDX56-204ENST00000431640 SIM1P81133 766 aaPredicted RBP11.99□□□□□ -0.49
DDX56-204ENST00000431640 HHEXQ03014 270 aa11.99□□□□□ -0.49
DDX56-204ENST00000431640 LTB4RQ15722 352 aa11.99□□□□□ -0.49
DDX56-204ENST00000431640 ZNF528Q3MIS6 628 aa11.99□□□□□ -0.49
DDX56-204ENST00000431640 EIPR1Q53HC9 387 aa11.99□□□□□ -0.49
DDX56-204ENST00000431640 RNLSQ5VYX0 342 aa11.99□□□□□ -0.49
DDX56-204ENST00000431640 ZER1Q7Z7L7 766 aa11.99□□□□□ -0.49
DDX56-204ENST00000431640 SLCO6A1Q86UG4 719 aa11.99□□□□□ -0.49
DDX56-204ENST00000431640 PARGQ86W56 976 aa11.99□□□□□ -0.49
DDX56-204ENST00000431640 FAM26EQ8N5C1 309 aa11.99□□□□□ -0.49
DDX56-204ENST00000431640 CSNK1A1LQ8N752 337 aa11.99□□□□□ -0.49
DDX56-204ENST00000431640 ZDHHC1Q8WTX9 485 aa11.99□□□□□ -0.49
DDX56-204ENST00000431640 PATE1Q8WXA2 126 aa11.99□□□□□ -0.49
DDX56-204ENST00000431640 OTUB1Q96FW1 271 aaPredicted RBP11.99□□□□□ -0.49
DDX56-204ENST00000431640 STACQ99469 402 aa11.99□□□□□ -0.49
DDX56-204ENST00000431640 CCDC3Q9BQI4 270 aa11.99□□□□□ -0.49
DDX56-204ENST00000431640 POLDIP3Q9BY77 421 aaKnown RBP11.99□□□□□ -0.49
DDX56-204ENST00000431640 IL21RQ9HBE5 538 aa11.99□□□□□ -0.49
DDX56-204ENST00000431640 HMG20AQ9NP66 347 aa11.99□□□□□ -0.49
DDX56-204ENST00000431640 FSCN3Q9NQT6 498 aa11.99□□□□□ -0.49
DDX56-204ENST00000431640 MAN2C1Q9NTJ4 1040 aa11.99□□□□□ -0.49
DDX56-204ENST00000431640 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.99□□□□□ -0.49
DDX56-204ENST00000431640 B3GNT3Q9Y2A9 372 aa11.99□□□□□ -0.49
DDX56-204ENST00000431640 WDR45Q9Y484 360 aa11.99□□□□□ -0.49
DDX56-204ENST00000431640 PCDH15Q96QU1 1955 aa11.98□□□□□ -0.49
DDX56-204ENST00000431640 BLACEA4D250 179 aa11.98□□□□□ -0.49
DDX56-204ENST00000431640 SNTNA6NMZ2 147 aa11.98□□□□□ -0.49
DDX56-204ENST00000431640 EFCAB9A8MZ26 197 aa11.98□□□□□ -0.49
DDX56-204ENST00000431640 PRR33A8MZF0 331 aa11.98□□□□□ -0.49
DDX56-204ENST00000431640 M0R082 166 aa11.98□□□□□ -0.49
DDX56-204ENST00000431640 GALR2O43603 387 aaPredicted RBP11.98□□□□□ -0.49
DDX56-204ENST00000431640 AIREO43918 545 aa11.98□□□□□ -0.49
DDX56-204ENST00000431640 FOXD2O60548 495 aaPredicted RBP11.98□□□□□ -0.49
DDX56-204ENST00000431640 PLOD3O60568 738 aa11.98□□□□□ -0.49
DDX56-204ENST00000431640 SRPX2O60687 465 aaPredicted RBP11.98□□□□□ -0.49
DDX56-204ENST00000431640 RPLP0P05388 317 aaKnown RBP11.98□□□□□ -0.49
DDX56-204ENST00000431640 THBS1P07996 1170 aa11.98□□□□□ -0.49
DDX56-204ENST00000431640 ALOX5P09917 674 aa11.98□□□□□ -0.49
DDX56-204ENST00000431640 ZNF12P17014 697 aa11.98□□□□□ -0.49
DDX56-204ENST00000431640 TNNI3P19429 210 aa11.98□□□□□ -0.49
DDX56-204ENST00000431640 MMP11P24347 488 aa11.98□□□□□ -0.49
DDX56-204ENST00000431640 CD38P28907 300 aa11.98□□□□□ -0.49
DDX56-204ENST00000431640 LSSP48449 732 aa11.98□□□□□ -0.49
DDX56-204ENST00000431640 GIPRP48546 466 aa11.98□□□□□ -0.49
DDX56-204ENST00000431640 DHPSP49366 369 aaPredicted RBP11.98□□□□□ -0.49
DDX56-204ENST00000431640 SMSP52788 366 aa11.98□□□□□ -0.49
DDX56-204ENST00000431640 VBP1P61758 197 aa11.98□□□□□ -0.49
DDX56-204ENST00000431640 RACK1P63244 317 aaKnown RBP11.98□□□□□ -0.49
DDX56-204ENST00000431640 CDK5Q00535 292 aa11.98□□□□□ -0.49
DDX56-204ENST00000431640 DUSP8Q13202 625 aa11.98□□□□□ -0.49
DDX56-204ENST00000431640 DECR1Q16698 335 aa11.98□□□□□ -0.49
DDX56-204ENST00000431640 ZNF628Q5EBL2 1059 aa11.98□□□□□ -0.49
DDX56-204ENST00000431640 LYSMD4Q5XG99 296 aa11.98□□□□□ -0.49
DDX56-204ENST00000431640 C16orf87Q6PH81 154 aa11.98□□□□□ -0.49
DDX56-204ENST00000431640 SLC46A3Q7Z3Q1 461 aa11.98□□□□□ -0.49
DDX56-204ENST00000431640 ADCK1Q86TW2 530 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms