RNA–Protein interactions for RNA: ENST00000431543.6

LAMA4-208, Transcript of laminin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene LAMA4, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-208ENST00000431543 DNAJA2O60884 412 aa13.18□□□□□ -0.3
LAMA4-208ENST00000431543 RASAL1O95294 804 aa13.18□□□□□ -0.3
LAMA4-208ENST00000431543 AGR2O95994 175 aa13.18□□□□□ -0.3
LAMA4-208ENST00000431543 MST1P26927 711 aa13.18□□□□□ -0.3
LAMA4-208ENST00000431543 MC3RP41968 323 aa13.18□□□□□ -0.3
LAMA4-208ENST00000431543 CAPRIN1Q14444 709 aaKnown RBP13.18□□□□□ -0.3
LAMA4-208ENST00000431543 ZNHIT3Q15649 155 aaPredicted RBP13.18□□□□□ -0.3
LAMA4-208ENST00000431543 LTB4RQ15722 352 aa13.18□□□□□ -0.3
LAMA4-208ENST00000431543 SPATS1Q496A3 300 aa13.18□□□□□ -0.3
LAMA4-208ENST00000431543 ZNF324BQ6AW86 544 aaPredicted RBP13.18□□□□□ -0.3
LAMA4-208ENST00000431543 SLC25A25Q6KCM7 469 aa13.18□□□□□ -0.3
LAMA4-208ENST00000431543 NANOGP8Q6NSW7 305 aa13.18□□□□□ -0.3
LAMA4-208ENST00000431543 ZCCHC12Q6PEW1 402 aa13.18□□□□□ -0.3
LAMA4-208ENST00000431543 FAM180AQ6UWF9 173 aa13.18□□□□□ -0.3
LAMA4-208ENST00000431543 GALNTL5Q7Z4T8 443 aa13.18□□□□□ -0.3
LAMA4-208ENST00000431543 MDGA2Q7Z553 956 aa13.18□□□□□ -0.3
LAMA4-208ENST00000431543 C9orf40Q8IXQ3 194 aa13.18□□□□□ -0.3
LAMA4-208ENST00000431543 OR2L13Q8N349 312 aa13.18□□□□□ -0.3
LAMA4-208ENST00000431543 ZFP90Q8TF47 636 aa13.18□□□□□ -0.3
LAMA4-208ENST00000431543 NEURL3Q96EH8 262 aa13.18□□□□□ -0.3
LAMA4-208ENST00000431543 FAM120BQ96EK7 910 aaKnown RBP13.18□□□□□ -0.3
LAMA4-208ENST00000431543 FBXL20Q96IG2 436 aa13.18□□□□□ -0.3
LAMA4-208ENST00000431543 MMADHCQ9H3L0 296 aaPredicted RBP13.18□□□□□ -0.3
LAMA4-208ENST00000431543 NANOGQ9H9S0 305 aa13.18□□□□□ -0.3
LAMA4-208ENST00000431543 AGPAT4Q9NRZ5 378 aa13.18□□□□□ -0.3
LAMA4-208ENST00000431543 VAPAQ9P0L0 249 aa13.18□□□□□ -0.3
LAMA4-208ENST00000431543 PRPF19Q9UMS4 504 aaKnown RBP13.18□□□□□ -0.3
LAMA4-208ENST00000431543 YARS2Q9Y2Z4 477 aaKnown RBP13.18□□□□□ -0.3
LAMA4-208ENST00000431543 TMEM247A6NEH6 219 aa13.17□□□□□ -0.3
LAMA4-208ENST00000431543 TTC36A6NLP5 189 aa13.17□□□□□ -0.3
LAMA4-208ENST00000431543 UPK1AO00322 258 aa13.17□□□□□ -0.3
LAMA4-208ENST00000431543 GMNNO75496 209 aa13.17□□□□□ -0.3
LAMA4-208ENST00000431543 SLC25A12O75746 678 aa13.17□□□□□ -0.3
LAMA4-208ENST00000431543 DNAJC8O75937 253 aaPredicted RBP13.17□□□□□ -0.3
LAMA4-208ENST00000431543 OR6B1O95007 311 aa13.17□□□□□ -0.3
LAMA4-208ENST00000431543 CD46P15529 392 aa13.17□□□□□ -0.3
LAMA4-208ENST00000431543 MATN1P21941 496 aa13.17□□□□□ -0.3
LAMA4-208ENST00000431543 SSTR4P31391 388 aa13.17□□□□□ -0.3
LAMA4-208ENST00000431543 SOX18P35713 384 aa13.17□□□□□ -0.3
LAMA4-208ENST00000431543 SOX3P41225 446 aa13.17□□□□□ -0.3
LAMA4-208ENST00000431543 CRATP43155 626 aa13.17□□□□□ -0.3
LAMA4-208ENST00000431543 SSR4P51571 173 aa13.17□□□□□ -0.3
LAMA4-208ENST00000431543 MRPS35P82673 323 aaKnown RBP13.17□□□□□ -0.3
LAMA4-208ENST00000431543 FUT7Q11130 342 aa13.17□□□□□ -0.3
LAMA4-208ENST00000431543 TRMT12Q53H54 448 aaKnown RBP13.17□□□□□ -0.3
LAMA4-208ENST00000431543 SAMD4BQ5PRF9 694 aaKnown RBP13.17□□□□□ -0.3
LAMA4-208ENST00000431543 FAM111BQ6SJ93 734 aa13.17□□□□□ -0.3
LAMA4-208ENST00000431543 IL20RBQ6UXL0 311 aa13.17□□□□□ -0.3
LAMA4-208ENST00000431543 BNC2Q6ZN30 1099 aaPredicted RBP13.17□□□□□ -0.3
LAMA4-208ENST00000431543 RNF111Q6ZNA4 994 aa13.17□□□□□ -0.3
LAMA4-208ENST00000431543 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.17□□□□□ -0.3
LAMA4-208ENST00000431543 TMEM156Q8N614 296 aa13.17□□□□□ -0.3
LAMA4-208ENST00000431543 BCORP1Q8N888 145 aa13.17□□□□□ -0.3
LAMA4-208ENST00000431543 SIMC1Q8NDZ2 872 aa13.17□□□□□ -0.3
LAMA4-208ENST00000431543 TNIP2Q8NFZ5 429 aa13.17□□□□□ -0.3
LAMA4-208ENST00000431543 OR7G2Q8NG99 324 aa13.17□□□□□ -0.3
LAMA4-208ENST00000431543 OR52R1Q8NGF1 315 aa13.17□□□□□ -0.3
LAMA4-208ENST00000431543 OR5AK3PQ8NH89 298 aa13.17□□□□□ -0.3
LAMA4-208ENST00000431543 PRR7Q8TB68 274 aa13.17□□□□□ -0.3
LAMA4-208ENST00000431543 CTHRC1Q96CG8 243 aa13.17□□□□□ -0.3
LAMA4-208ENST00000431543 MS4A4EQ96PG1 132 aa13.17□□□□□ -0.3
LAMA4-208ENST00000431543 RASL10BQ96S79 203 aa13.17□□□□□ -0.3
LAMA4-208ENST00000431543 CDRT15Q96T59 188 aa13.17□□□□□ -0.3
LAMA4-208ENST00000431543 GPATCH1Q9BRR8 931 aaKnown RBP13.17□□□□□ -0.3
LAMA4-208ENST00000431543 OR10A5Q9H207 317 aa13.17□□□□□ -0.3
LAMA4-208ENST00000431543 SIRT3Q9NTG7 399 aaPredicted RBP13.17□□□□□ -0.3
LAMA4-208ENST00000431543 OLAHQ9NV23 265 aa13.17□□□□□ -0.3
LAMA4-208ENST00000431543 NTMQ9P121 344 aa13.17□□□□□ -0.3
LAMA4-208ENST00000431543 GMEB1Q9Y692 573 aa13.17□□□□□ -0.3
LAMA4-208ENST00000431543 UTP20O75691 2785 aaKnown RBP13.16□□□□□ -0.3
LAMA4-208ENST00000431543 ANKUB1A6NFN9 424 aa13.16□□□□□ -0.3
LAMA4-208ENST00000431543 OR6C76A6NM76 312 aa13.16□□□□□ -0.3
LAMA4-208ENST00000431543 STAMBPO95630 424 aa13.16□□□□□ -0.3
LAMA4-208ENST00000431543 S1PR1P21453 382 aa13.16□□□□□ -0.3
LAMA4-208ENST00000431543 SLC6A2P23975 617 aa13.16□□□□□ -0.3
LAMA4-208ENST00000431543 CPOXP36551 454 aa13.16□□□□□ -0.3
LAMA4-208ENST00000431543 PGM1P36871 562 aa13.16□□□□□ -0.3
LAMA4-208ENST00000431543 SLC37A1P57057 533 aa13.16□□□□□ -0.3
LAMA4-208ENST00000431543 MGAT2Q10469 447 aa13.16□□□□□ -0.3
LAMA4-208ENST00000431543 FADDQ13158 208 aa13.16□□□□□ -0.3
LAMA4-208ENST00000431543 GNA13Q14344 377 aa13.16□□□□□ -0.3
LAMA4-208ENST00000431543 HLA-DQA1Q5Y7H0 255 aa13.16□□□□□ -0.3
LAMA4-208ENST00000431543 SAXO2Q658L1 398 aa13.16□□□□□ -0.3
LAMA4-208ENST00000431543 SLC29A4Q7RTT9 530 aa13.16□□□□□ -0.3
LAMA4-208ENST00000431543 CYP4Z2PQ8N1L4 340 aa13.16□□□□□ -0.3
LAMA4-208ENST00000431543 HORMAD2Q8N7B1 307 aa13.16□□□□□ -0.3
LAMA4-208ENST00000431543 CDRT4Q8N9R6 151 aa13.16□□□□□ -0.3
LAMA4-208ENST00000431543 OR52N2Q8NGI0 321 aa13.16□□□□□ -0.3
LAMA4-208ENST00000431543 OR5L2Q8NGL0 311 aa13.16□□□□□ -0.3
LAMA4-208ENST00000431543 OR8K3Q8NH51 312 aa13.16□□□□□ -0.3
LAMA4-208ENST00000431543 ADAMTS15Q8TE58 950 aa13.16□□□□□ -0.3
LAMA4-208ENST00000431543 SLC7A6OSQ96CW6 309 aaPredicted RBP13.16□□□□□ -0.3
LAMA4-208ENST00000431543 SLC35G5Q96KT7 338 aa13.16□□□□□ -0.3
LAMA4-208ENST00000431543 C5orf34Q96MH7 638 aa13.16□□□□□ -0.3
LAMA4-208ENST00000431543 SLX1AQ9BQ83 275 aa13.16□□□□□ -0.3
LAMA4-208ENST00000431543 THTPAQ9BU02 230 aa13.16□□□□□ -0.3
LAMA4-208ENST00000431543 SPATA9Q9BWV2 254 aa13.16□□□□□ -0.3
LAMA4-208ENST00000431543 ACTRT3Q9BYD9 372 aa13.16□□□□□ -0.3
LAMA4-208ENST00000431543 LRMDAQ9H2I8 198 aa13.16□□□□□ -0.3
LAMA4-208ENST00000431543 SLC25A37Q9NYZ2 338 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms