RNA–Protein interactions for RNA: ENST00000430158.5

USP40-205, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 1,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-205ENST00000430158 GSNP06396 782 aa11.42□□□□□ -0.58
USP40-205ENST00000430158 CCL3P10147 92 aa11.42□□□□□ -0.58
USP40-205ENST00000430158 ADSLP30566 484 aaPredicted RBP11.42□□□□□ -0.58
USP40-205ENST00000430158 GABRA3P34903 492 aa11.42□□□□□ -0.58
USP40-205ENST00000430158 PRKAG1P54619 331 aa11.42□□□□□ -0.58
USP40-205ENST00000430158 FBXW4P57775 412 aa11.42□□□□□ -0.58
USP40-205ENST00000430158 PSPHP78330 225 aa11.42□□□□□ -0.58
USP40-205ENST00000430158 ZNF155Q12901 538 aaPredicted RBP11.42□□□□□ -0.58
USP40-205ENST00000430158 LASP1Q14847 261 aaKnown RBP11.42□□□□□ -0.58
USP40-205ENST00000430158 MAPKAPK3Q16644 382 aa11.42□□□□□ -0.58
USP40-205ENST00000430158 GTDC1Q4AE62 458 aa11.42□□□□□ -0.58
USP40-205ENST00000430158 ZNF766Q5HY98 468 aa11.42□□□□□ -0.58
USP40-205ENST00000430158 LRIF1Q5T3J3 769 aa11.42□□□□□ -0.58
USP40-205ENST00000430158 SLC25A25Q6KCM7 469 aa11.42□□□□□ -0.58
USP40-205ENST00000430158 CDC73Q6P1J9 531 aa11.42□□□□□ -0.58
USP40-205ENST00000430158 TMEM81Q6P7N7 255 aa11.42□□□□□ -0.58
USP40-205ENST00000430158 DLEU7Q6UYE1 221 aa11.42□□□□□ -0.58
USP40-205ENST00000430158 RTL4Q6ZR62 310 aa11.42□□□□□ -0.58
USP40-205ENST00000430158 DND1Q8IYX4 353 aaKnown RBP11.42□□□□□ -0.58
USP40-205ENST00000430158 CYP4Z2PQ8N1L4 340 aa11.42□□□□□ -0.58
USP40-205ENST00000430158 DPP10Q8N608 796 aa11.42□□□□□ -0.58
USP40-205ENST00000430158 OR10G3Q8NGC4 313 aa11.42□□□□□ -0.58
USP40-205ENST00000430158 ZFP90Q8TF47 636 aa11.42□□□□□ -0.58
USP40-205ENST00000430158 TMBIM1Q969X1 311 aa11.42□□□□□ -0.58
USP40-205ENST00000430158 OMA1Q96E52 524 aa11.42□□□□□ -0.58
USP40-205ENST00000430158 ITCHQ96J02 903 aa11.42□□□□□ -0.58
USP40-205ENST00000430158 PANX1Q96RD7 426 aa11.42□□□□□ -0.58
USP40-205ENST00000430158 TAAR6Q96RI8 345 aa11.42□□□□□ -0.58
USP40-205ENST00000430158 CCT8L2Q96SF2 557 aa11.42□□□□□ -0.58
USP40-205ENST00000430158 ACTRT3Q9BYD9 372 aa11.42□□□□□ -0.58
USP40-205ENST00000430158 PIGUQ9H490 435 aa11.42□□□□□ -0.58
USP40-205ENST00000430158 EQTNQ9NQ60 294 aa11.42□□□□□ -0.58
USP40-205ENST00000430158 DUSP22Q9NRW4 184 aa11.42□□□□□ -0.58
USP40-205ENST00000430158 HPF1Q9NWY4 346 aa11.42□□□□□ -0.58
USP40-205ENST00000430158 ANAPC2Q9UJX6 822 aa11.42□□□□□ -0.58
USP40-205ENST00000430158 NTNG1Q9Y2I2 539 aa11.42□□□□□ -0.58
USP40-205ENST00000430158 PCDHB14Q9Y5E9 798 aa11.42□□□□□ -0.58
USP40-205ENST00000430158 RNF103-CHMP3A0A140T963 221 aa11.41□□□□□ -0.58
USP40-205ENST00000430158 PRAMEF27A3QJZ7 478 aa11.41□□□□□ -0.58
USP40-205ENST00000430158 OR6C70A6NIJ9 312 aa11.41□□□□□ -0.58
USP40-205ENST00000430158 RFXANKO14593 260 aa11.41□□□□□ -0.58
USP40-205ENST00000430158 SLC22A2O15244 555 aa11.41□□□□□ -0.58
USP40-205ENST00000430158 UGT2B11O75310 529 aa11.41□□□□□ -0.58
USP40-205ENST00000430158 PIGAP37287 484 aa11.41□□□□□ -0.58
USP40-205ENST00000430158 CASRP41180 1078 aa11.41□□□□□ -0.58
USP40-205ENST00000430158 PTGDSP41222 190 aa11.41□□□□□ -0.58
USP40-205ENST00000430158 KCNK10P57789 538 aa11.41□□□□□ -0.58
USP40-205ENST00000430158 RPS26P62854 115 aaKnown RBP11.41□□□□□ -0.58
USP40-205ENST00000430158 OC90Q02509 493 aaPredicted RBP11.41□□□□□ -0.58
USP40-205ENST00000430158 FOXO1Q12778 655 aa11.41□□□□□ -0.58
USP40-205ENST00000430158 TP53BP2Q13625 1128 aa11.41□□□□□ -0.58
USP40-205ENST00000430158 ZNF324BQ6AW86 544 aaPredicted RBP11.41□□□□□ -0.58
USP40-205ENST00000430158 CPLX4Q7Z7G2 160 aa11.41□□□□□ -0.58
USP40-205ENST00000430158 ZAR1Q86SH2 424 aa11.41□□□□□ -0.58
USP40-205ENST00000430158 PACS2Q86VP3 889 aa11.41□□□□□ -0.58
USP40-205ENST00000430158 TREML1Q86YW5 311 aa11.41□□□□□ -0.58
USP40-205ENST00000430158 BCORP1Q8N888 145 aa11.41□□□□□ -0.58
USP40-205ENST00000430158 TEX19Q8NA77 164 aa11.41□□□□□ -0.58
USP40-205ENST00000430158 PSD4Q8NDX1 1056 aa11.41□□□□□ -0.58
USP40-205ENST00000430158 SPPL2AQ8TCT8 520 aa11.41□□□□□ -0.58
USP40-205ENST00000430158 PIK3R3Q92569 461 aa11.41□□□□□ -0.58
USP40-205ENST00000430158 OTUB1Q96FW1 271 aaPredicted RBP11.41□□□□□ -0.58
USP40-205ENST00000430158 NODALQ96S42 347 aa11.41□□□□□ -0.58
USP40-205ENST00000430158 SECISBP2Q96T21 854 aaKnown RBP11.41□□□□□ -0.58
USP40-205ENST00000430158 STACQ99469 402 aa11.41□□□□□ -0.58
USP40-205ENST00000430158 SLC35A5Q9BS91 424 aa11.41□□□□□ -0.58
USP40-205ENST00000430158 YIPF4Q9BSR8 244 aa11.41□□□□□ -0.58
USP40-205ENST00000430158 CCDC106Q9BWC9 280 aa11.41□□□□□ -0.58
USP40-205ENST00000430158 FAM107BQ9H098 131 aa11.41□□□□□ -0.58
USP40-205ENST00000430158 NSRP1Q9H0G5 558 aaKnown RBP11.41□□□□□ -0.58
USP40-205ENST00000430158 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.41□□□□□ -0.58
USP40-205ENST00000430158 FBXO34Q9NWN3 711 aa11.41□□□□□ -0.58
USP40-205ENST00000430158 LUZP4Q9P127 313 aa11.41□□□□□ -0.58
USP40-205ENST00000430158 CBLCQ9ULV8 474 aa11.41□□□□□ -0.58
USP40-205ENST00000430158 PCDHGB4Q9UN71 923 aa11.41□□□□□ -0.58
USP40-205ENST00000430158 PCNX1Q96RV3 2341 aa11.41□□□□□ -0.58
USP40-205ENST00000430158 PINLYPA6NC86 204 aa11.4□□□□□ -0.58
USP40-205ENST00000430158 ANKRD33BA6NCL7 494 aa11.4□□□□□ -0.58
USP40-205ENST00000430158 CAPN14A8MX76 684 aa11.4□□□□□ -0.58
USP40-205ENST00000430158 WISP2O76076 250 aa11.4□□□□□ -0.58
USP40-205ENST00000430158 KCNK2O95069 426 aa11.4□□□□□ -0.58
USP40-205ENST00000430158 ZIC2O95409 532 aaPredicted RBP11.4□□□□□ -0.58
USP40-205ENST00000430158 IL33O95760 270 aa11.4□□□□□ -0.58
USP40-205ENST00000430158 FAM107AO95990 144 aa11.4□□□□□ -0.58
USP40-205ENST00000430158 SNRPB2P08579 225 aaKnown RBP11.4□□□□□ -0.58
USP40-205ENST00000430158 SOAT1P35610 550 aa11.4□□□□□ -0.58
USP40-205ENST00000430158 PRIM2P49643 509 aa11.4□□□□□ -0.58
USP40-205ENST00000430158 PNLIPRP2P54317 469 aa11.4□□□□□ -0.58
USP40-205ENST00000430158 GAS1P54826 345 aa11.4□□□□□ -0.58
USP40-205ENST00000430158 NRG3P56975 720 aa11.4□□□□□ -0.58
USP40-205ENST00000430158 MRPS22P82650 360 aaKnown RBP11.4□□□□□ -0.58
USP40-205ENST00000430158 PLCXD2Q0VAA5 305 aa11.4□□□□□ -0.58
USP40-205ENST00000430158 FUT5Q11128 374 aa11.4□□□□□ -0.58
USP40-205ENST00000430158 MAPK11Q15759 364 aa11.4□□□□□ -0.58
USP40-205ENST00000430158 SPDYE7PQ495Y7 208 aa11.4□□□□□ -0.58
USP40-205ENST00000430158 PRR30Q53SZ7 412 aaPredicted RBP11.4□□□□□ -0.58
USP40-205ENST00000430158 RNFT1Q5M7Z0 435 aa11.4□□□□□ -0.58
USP40-205ENST00000430158 COX20Q5RI15 118 aa11.4□□□□□ -0.58
USP40-205ENST00000430158 HEPHL1Q6MZM0 1159 aa11.4□□□□□ -0.58
USP40-205ENST00000430158 ZNF621Q6ZSS3 439 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms