RNA–Protein interactions for RNA: ENST00000429738.1

MRPL28-203, Transcript of mitochondrial ribosomal protein L28, human

TSL 2 BASIC

Gene MRPL28, Length 310 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL28-203	ENST00000429738	GPATCH1	Q9BRR8	931 aa	Known RBP	16.14	■□□□□ 0.17
MRPL28-203	ENST00000429738	OR2B2	Q9GZK3	357 aa		16.14	■□□□□ 0.17
MRPL28-203	ENST00000429738	CLEC4M	Q9H2X3	399 aa	Predicted RBP	16.14	■□□□□ 0.17
MRPL28-203	ENST00000429738	RASSF1	Q9NS23	344 aa		16.14	■□□□□ 0.17
MRPL28-203	ENST00000429738	MAPRE3	Q9UPY8	281 aa		16.14	■□□□□ 0.17
MRPL28-203	ENST00000429738	POLR3H	Q9Y535	204 aa	Predicted RBP	16.14	■□□□□ 0.17
MRPL28-203	ENST00000429738	VPS13C	Q709C8	3753 aa		16.13	■□□□□ 0.17
MRPL28-203	ENST00000429738	CD8B2	A6NJW9	211 aa		16.13	■□□□□ 0.17
MRPL28-203	ENST00000429738	PLOD2	O00469	737 aa		16.13	■□□□□ 0.17
MRPL28-203	ENST00000429738	COPE	O14579	308 aa		16.13	■□□□□ 0.17
MRPL28-203	ENST00000429738	PSMG1	O95456	288 aa		16.13	■□□□□ 0.17
MRPL28-203	ENST00000429738	ACTL6A	O96019	429 aa		16.13	■□□□□ 0.17
MRPL28-203	ENST00000429738	PNLIPRP2	P54317	469 aa		16.13	■□□□□ 0.17
MRPL28-203	ENST00000429738	WNT3	P56703	355 aa		16.13	■□□□□ 0.17
MRPL28-203	ENST00000429738	PSG6	Q00889	435 aa		16.13	■□□□□ 0.17
MRPL28-203	ENST00000429738	TOMM20	Q15388	145 aa		16.13	■□□□□ 0.17
MRPL28-203	ENST00000429738	SF3B4	Q15427	424 aa	Known RBP eCLIP	16.13	■□□□□ 0.17	9e-6	■■■■■ 27.7
MRPL28-203	ENST00000429738	NOXRED1	Q6NXP6	359 aa		16.13	■□□□□ 0.17
MRPL28-203	ENST00000429738	RNF165	Q6ZSG1	346 aa		16.13	■□□□□ 0.17
MRPL28-203	ENST00000429738	WDR53	Q7Z5U6	358 aa	Predicted RBP	16.13	■□□□□ 0.17
MRPL28-203	ENST00000429738	C4orf33	Q8N1A6	199 aa		16.13	■□□□□ 0.17
MRPL28-203	ENST00000429738	RMND5B	Q96G75	393 aa	Predicted RBP	16.13	■□□□□ 0.17
MRPL28-203	ENST00000429738	ALPK1	Q96QP1	1244 aa		16.13	■□□□□ 0.17
MRPL28-203	ENST00000429738	BBS4	Q96RK4	519 aa		16.13	■□□□□ 0.17
MRPL28-203	ENST00000429738	ADO	Q96SZ5	270 aa		16.13	■□□□□ 0.17
MRPL28-203	ENST00000429738	ANKZF1	Q9H8Y5	726 aa		16.13	■□□□□ 0.17
MRPL28-203	ENST00000429738	SERHL	Q9NQF3	203 aa		16.13	■□□□□ 0.17
MRPL28-203	ENST00000429738	RRAGD	Q9NQL2	400 aa	Predicted RBP	16.13	■□□□□ 0.17
MRPL28-203	ENST00000429738	MKS1	Q9NXB0	559 aa		16.13	■□□□□ 0.17
MRPL28-203	ENST00000429738	TAS2R9	Q9NYW1	312 aa		16.13	■□□□□ 0.17
MRPL28-203	ENST00000429738	ZNF629	Q9UEG4	869 aa	Predicted RBP	16.13	■□□□□ 0.17
MRPL28-203	ENST00000429738	CAMK2A	Q9UQM7	478 aa		16.13	■□□□□ 0.17
MRPL28-203	ENST00000429738	PLEKHA6	Q9Y2H5	1048 aa		16.13	■□□□□ 0.17
MRPL28-203	ENST00000429738	WIF1	Q9Y5W5	379 aa		16.13	■□□□□ 0.17
MRPL28-203	ENST00000429738	MBD3L4	A6NDZ8	208 aa	Predicted RBP	16.12	■□□□□ 0.17
MRPL28-203	ENST00000429738	MBD3L3	A6NE82	208 aa	Predicted RBP	16.12	■□□□□ 0.17
MRPL28-203	ENST00000429738	MBD3L5	A6NJ08	208 aa	Predicted RBP	16.12	■□□□□ 0.17
MRPL28-203	ENST00000429738	SMIM23	A6NLE4	172 aa		16.12	■□□□□ 0.17
MRPL28-203	ENST00000429738		B4DXG7	233 aa		16.12	■□□□□ 0.17
MRPL28-203	ENST00000429738	SYT5	O00445	386 aa		16.12	■□□□□ 0.17
MRPL28-203	ENST00000429738	COQ9	O75208	318 aa		16.12	■□□□□ 0.17
MRPL28-203	ENST00000429738	JUN	P05412	331 aa	Known RBP	16.12	■□□□□ 0.17
MRPL28-203	ENST00000429738	CPN1	P15169	458 aa		16.12	■□□□□ 0.17
MRPL28-203	ENST00000429738	PEX19	P40855	299 aa		16.12	■□□□□ 0.17
MRPL28-203	ENST00000429738	NCBP2	P52298	156 aa	Known RBP eCLIP	16.12	■□□□□ 0.17
MRPL28-203	ENST00000429738	ZNF136	P52737	540 aa		16.12	■□□□□ 0.17
MRPL28-203	ENST00000429738	GAS1	P54826	345 aa		16.12	■□□□□ 0.17
MRPL28-203	ENST00000429738	ADAM8	P78325	824 aa		16.12	■□□□□ 0.17
MRPL28-203	ENST00000429738	EFR3A	Q14156	821 aa		16.12	■□□□□ 0.17
MRPL28-203	ENST00000429738	PCLAF	Q15004	111 aa		16.12	■□□□□ 0.17
MRPL28-203	ENST00000429738	FBXL19-AS1	Q494R0	122 aa		16.12	■□□□□ 0.17
MRPL28-203	ENST00000429738	IKBIP	Q70UQ0	350 aa		16.12	■□□□□ 0.17
MRPL28-203	ENST00000429738	PLCZ1	Q86YW0	608 aa		16.12	■□□□□ 0.17
MRPL28-203	ENST00000429738	C10orf107	Q8IVU9	208 aa		16.12	■□□□□ 0.17
MRPL28-203	ENST00000429738	CCDC63	Q8NA47	563 aa		16.12	■□□□□ 0.17
MRPL28-203	ENST00000429738	OR4N2	Q8NGD1	307 aa		16.12	■□□□□ 0.17
MRPL28-203	ENST00000429738	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	16.12	■□□□□ 0.17
MRPL28-203	ENST00000429738	ZPLD1	Q8TCW7	415 aa		16.12	■□□□□ 0.17
MRPL28-203	ENST00000429738	SH3GL2	Q99962	352 aa		16.12	■□□□□ 0.17
MRPL28-203	ENST00000429738	GLIPR2	Q9H4G4	154 aa		16.12	■□□□□ 0.17
MRPL28-203	ENST00000429738	MIEF1	Q9NQG6	463 aa		16.12	■□□□□ 0.17
MRPL28-203	ENST00000429738	SENP1	Q9P0U3	644 aa		16.12	■□□□□ 0.17
MRPL28-203	ENST00000429738	C19orf53	Q9UNZ5	99 aa	Predicted RBP	16.12	■□□□□ 0.17
MRPL28-203	ENST00000429738	PCNX3	Q9H6A9	2034 aa		16.11	■□□□□ 0.17
MRPL28-203	ENST00000429738	CRCP	O75575	148 aa		16.11	■□□□□ 0.17
MRPL28-203	ENST00000429738	IL2RA	P01589	272 aa		16.11	■□□□□ 0.17
MRPL28-203	ENST00000429738	IFI6	P09912	130 aa		16.11	■□□□□ 0.17
MRPL28-203	ENST00000429738	IL12B	P29460	328 aa		16.11	■□□□□ 0.17
MRPL28-203	ENST00000429738	MC3R	P41968	323 aa		16.11	■□□□□ 0.17
MRPL28-203	ENST00000429738	DGKQ	P52824	942 aa		16.11	■□□□□ 0.17
MRPL28-203	ENST00000429738	GFRA1	P56159	465 aa		16.11	■□□□□ 0.17
MRPL28-203	ENST00000429738	SNTB1	Q13884	538 aa	Known RBP	16.11	■□□□□ 0.17
MRPL28-203	ENST00000429738	CLEC6A	Q6EIG7	209 aa		16.11	■□□□□ 0.17
MRPL28-203	ENST00000429738		Q6ZSR9	355 aa		16.11	■□□□□ 0.17
MRPL28-203	ENST00000429738	LARP4	Q71RC2	724 aa	Known RBP eCLIP	16.11	■□□□□ 0.17	3e-7	■■■□□ 14.8
MRPL28-203	ENST00000429738	ADGRE4P	Q86SQ3	457 aa		16.11	■□□□□ 0.17
MRPL28-203	ENST00000429738	SLC44A2	Q8IWA5	706 aa	Predicted RBP	16.11	■□□□□ 0.17
MRPL28-203	ENST00000429738	OR2L13	Q8N349	312 aa		16.11	■□□□□ 0.17
MRPL28-203	ENST00000429738	GOT1L1	Q8NHS2	421 aa	Predicted RBP	16.11	■□□□□ 0.17
MRPL28-203	ENST00000429738	CDC26	Q8NHZ8	85 aa		16.11	■□□□□ 0.17
MRPL28-203	ENST00000429738	MBD6	Q96DN6	1003 aa		16.11	■□□□□ 0.17
MRPL28-203	ENST00000429738	ZNF764	Q96H86	408 aa	Predicted RBP	16.11	■□□□□ 0.17
MRPL28-203	ENST00000429738	EGLN2	Q96KS0	407 aa		16.11	■□□□□ 0.17
MRPL28-203	ENST00000429738	FCRL1	Q96LA6	429 aa		16.11	■□□□□ 0.17
MRPL28-203	ENST00000429738	AMDHD1	Q96NU7	426 aa		16.11	■□□□□ 0.17
MRPL28-203	ENST00000429738	GATA5	Q9BWX5	397 aa	Predicted RBP	16.11	■□□□□ 0.17
MRPL28-203	ENST00000429738	CALHM2	Q9HA72	323 aa		16.11	■□□□□ 0.17
MRPL28-203	ENST00000429738	CRIM1	Q9NZV1	1036 aa		16.11	■□□□□ 0.17
MRPL28-203	ENST00000429738	MID2	Q9UJV3	735 aa		16.11	■□□□□ 0.17
MRPL28-203	ENST00000429738	FBXL2	Q9UKC9	423 aa		16.11	■□□□□ 0.17
MRPL28-203	ENST00000429738	MRPS18C	Q9Y3D5	142 aa	Known RBP	16.11	■□□□□ 0.17
MRPL28-203	ENST00000429738	PTGDR2	Q9Y5Y4	395 aa		16.11	■□□□□ 0.17
MRPL28-203	ENST00000429738	MED12L	Q86YW9	2145 aa		16.1	■□□□□ 0.17
MRPL28-203	ENST00000429738	HRNR	Q86YZ3	2850 aa	Predicted RBP	16.1	■□□□□ 0.17
MRPL28-203	ENST00000429738	UPK1A	O00322	258 aa		16.1	■□□□□ 0.17
MRPL28-203	ENST00000429738	DVL2	O14641	736 aa		16.1	■□□□□ 0.17
MRPL28-203	ENST00000429738	NUDT17	P0C025	328 aa		16.1	■□□□□ 0.17
MRPL28-203	ENST00000429738	BMP5	P22003	454 aa		16.1	■□□□□ 0.17
MRPL28-203	ENST00000429738	TACR1	P25103	407 aa		16.1	■□□□□ 0.17
MRPL28-203	ENST00000429738	SRD5A2	P31213	254 aa		16.1	■□□□□ 0.17

Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms