RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 MAGEA4P43358 317 aa16.51■□□□□ 0.23
UPK3BP1-201ENST00000428678 DSCR4P56555 118 aaPredicted RBP16.51■□□□□ 0.23
UPK3BP1-201ENST00000428678 CORO7P57737 925 aa16.51■□□□□ 0.23
UPK3BP1-201ENST00000428678 EEFSECP57772 596 aaKnown RBP16.51■□□□□ 0.23
UPK3BP1-201ENST00000428678 TRAF3Q13114 568 aa16.51■□□□□ 0.23
UPK3BP1-201ENST00000428678 RAET1LQ5VY80 246 aa16.51■□□□□ 0.23
UPK3BP1-201ENST00000428678 ZNF610Q8N9Z0 462 aa16.51■□□□□ 0.23
UPK3BP1-201ENST00000428678 TM4SF18Q96CE8 201 aa16.51■□□□□ 0.23
UPK3BP1-201ENST00000428678 NSUN5Q96P11 429 aaKnown RBP16.51■□□□□ 0.23
UPK3BP1-201ENST00000428678 GPR78Q96P69 363 aa16.51■□□□□ 0.23
UPK3BP1-201ENST00000428678 NTMT1Q9BV86 223 aa16.51■□□□□ 0.23
UPK3BP1-201ENST00000428678 FAIM2Q9BWQ8 316 aa16.51■□□□□ 0.23
UPK3BP1-201ENST00000428678 PINK1Q9BXM7 581 aa16.51■□□□□ 0.23
UPK3BP1-201ENST00000428678 KLHL4Q9C0H6 718 aa16.51■□□□□ 0.23
UPK3BP1-201ENST00000428678 FARSBQ9NSD9 589 aaKnown RBP16.51■□□□□ 0.23
UPK3BP1-201ENST00000428678 PCTPQ9UKL6 214 aa16.51■□□□□ 0.23
UPK3BP1-201ENST00000428678 PRR14LQ5THK1 2151 aa16.5■□□□□ 0.23
UPK3BP1-201ENST00000428678 H0YC42 278 aa16.5■□□□□ 0.23
UPK3BP1-201ENST00000428678 SEC14L5O43304 696 aa16.5■□□□□ 0.23
UPK3BP1-201ENST00000428678 EMC8O43402 210 aa16.5■□□□□ 0.23
UPK3BP1-201ENST00000428678 SCO2O43819 266 aa16.5■□□□□ 0.23
UPK3BP1-201ENST00000428678 BCAS2O75934 225 aaPredicted RBP16.5■□□□□ 0.23
UPK3BP1-201ENST00000428678 ESRRBO95718 433 aa16.5■□□□□ 0.23
UPK3BP1-201ENST00000428678 CGAP01215 116 aa16.5■□□□□ 0.23
UPK3BP1-201ENST00000428678 PLTPP55058 493 aa16.5■□□□□ 0.23
UPK3BP1-201ENST00000428678 TPD52P55327 224 aaPredicted RBP16.5■□□□□ 0.23
UPK3BP1-201ENST00000428678 GALNT1Q10472 559 aaPredicted RBP16.5■□□□□ 0.23
UPK3BP1-201ENST00000428678 UAP1Q16222 522 aaPredicted RBP16.5■□□□□ 0.23
UPK3BP1-201ENST00000428678 EXOC3L2Q2M3D2 409 aa16.5■□□□□ 0.23
UPK3BP1-201ENST00000428678 ERCC6LQ2NKX8 1250 aa16.5■□□□□ 0.23
UPK3BP1-201ENST00000428678 TECRLQ5HYJ1 363 aa16.5■□□□□ 0.23
UPK3BP1-201ENST00000428678 FNDC9Q8TBE3 224 aa16.5■□□□□ 0.23
UPK3BP1-201ENST00000428678 TMEM171Q8WVE6 324 aa16.5■□□□□ 0.23
UPK3BP1-201ENST00000428678 KAT2AQ92830 837 aa16.5■□□□□ 0.23
UPK3BP1-201ENST00000428678 EFHD2Q96C19 240 aaPredicted RBP16.5■□□□□ 0.23
UPK3BP1-201ENST00000428678 ZNF681Q96N22 645 aa16.5■□□□□ 0.23
UPK3BP1-201ENST00000428678 VPS11Q9H270 941 aa16.5■□□□□ 0.23
UPK3BP1-201ENST00000428678 DSN1Q9H410 356 aa16.5■□□□□ 0.23
UPK3BP1-201ENST00000428678 PPP4R1LQ9P1A2 415 aa16.5■□□□□ 0.23
UPK3BP1-201ENST00000428678 UTS2RQ9UKP6 389 aa16.5■□□□□ 0.23
UPK3BP1-201ENST00000428678 PROCRQ9UNN8 238 aa16.5■□□□□ 0.23
UPK3BP1-201ENST00000428678 ABCA1O95477 2261 aa16.5■□□□□ 0.23
UPK3BP1-201ENST00000428678 UQCRHLA0A096LP55 91 aa16.49■□□□□ 0.23
UPK3BP1-201ENST00000428678 HMX2A2RU54 273 aa16.49■□□□□ 0.23
UPK3BP1-201ENST00000428678 RAD51CO43502 376 aa16.49■□□□□ 0.23
UPK3BP1-201ENST00000428678 PDYNP01213 254 aa16.49■□□□□ 0.23
UPK3BP1-201ENST00000428678 CT45A8P0DMV1 189 aa16.49■□□□□ 0.23
UPK3BP1-201ENST00000428678 CT45A9P0DMV2 189 aa16.49■□□□□ 0.23
UPK3BP1-201ENST00000428678 CD8BP10966 210 aa16.49■□□□□ 0.23
UPK3BP1-201ENST00000428678 NID1P14543 1247 aa16.49■□□□□ 0.23
UPK3BP1-201ENST00000428678 HK1P19367 917 aa16.49■□□□□ 0.23
UPK3BP1-201ENST00000428678 TBXA2RP21731 343 aa16.49■□□□□ 0.23
UPK3BP1-201ENST00000428678 TYK2P29597 1187 aa16.49■□□□□ 0.23
UPK3BP1-201ENST00000428678 SERPINB8P50452 374 aa16.49■□□□□ 0.23
UPK3BP1-201ENST00000428678 GAS1P54826 345 aa16.49■□□□□ 0.23
UPK3BP1-201ENST00000428678 CLDN15P56746 228 aa16.49■□□□□ 0.23
UPK3BP1-201ENST00000428678 FGFBP1Q14512 234 aa16.49■□□□□ 0.23
UPK3BP1-201ENST00000428678 CT45A2Q5DJT8 189 aa16.49■□□□□ 0.23
UPK3BP1-201ENST00000428678 ZNF628Q5EBL2 1059 aa16.49■□□□□ 0.23
UPK3BP1-201ENST00000428678 NPSR1Q6W5P4 371 aa16.49■□□□□ 0.23
UPK3BP1-201ENST00000428678 C22orf34Q6ZV56 151 aa16.49■□□□□ 0.23
UPK3BP1-201ENST00000428678 MILR1Q7Z6M3 343 aa16.49■□□□□ 0.23
UPK3BP1-201ENST00000428678 CCDC116Q8IYX3 515 aa16.49■□□□□ 0.23
UPK3BP1-201ENST00000428678 OR4F6Q8NGB9 312 aa16.49■□□□□ 0.23
UPK3BP1-201ENST00000428678 ZNF675Q8TD23 568 aa16.49■□□□□ 0.23
UPK3BP1-201ENST00000428678 SELENOMQ8WWX9 145 aa16.49■□□□□ 0.23
UPK3BP1-201ENST00000428678 CAVIN3Q969G5 261 aa16.49■□□□□ 0.23
UPK3BP1-201ENST00000428678 CXorf56Q9H5V9 222 aa16.49■□□□□ 0.23
UPK3BP1-201ENST00000428678 RNF122Q9H9V4 155 aa16.49■□□□□ 0.23
UPK3BP1-201ENST00000428678 ZBTB26Q9HCK0 441 aa16.49■□□□□ 0.23
UPK3BP1-201ENST00000428678 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.48■□□□□ 0.23
UPK3BP1-201ENST00000428678 CRLF1O75462 422 aa16.48■□□□□ 0.23
UPK3BP1-201ENST00000428678 TNFRSF21O75509 655 aa16.48■□□□□ 0.23
UPK3BP1-201ENST00000428678 SUCLG1P53597 346 aaKnown RBP16.48■□□□□ 0.23
UPK3BP1-201ENST00000428678 PNLIPRP2P54317 469 aa16.48■□□□□ 0.23
UPK3BP1-201ENST00000428678 ATP5J2P56134 94 aa16.48■□□□□ 0.23
UPK3BP1-201ENST00000428678 MRPS22P82650 360 aaKnown RBP16.48■□□□□ 0.23
UPK3BP1-201ENST00000428678 PON3Q15166 354 aa16.48■□□□□ 0.23
UPK3BP1-201ENST00000428678 GGTA1PQ4G0N0 100 aa16.48■□□□□ 0.23
UPK3BP1-201ENST00000428678 BEX5Q5H9J7 111 aa16.48■□□□□ 0.23
UPK3BP1-201ENST00000428678 ZNF704Q6ZNC4 412 aaPredicted RBP16.48■□□□□ 0.23
UPK3BP1-201ENST00000428678 SLC44A2Q8IWA5 706 aaPredicted RBP16.48■□□□□ 0.23
UPK3BP1-201ENST00000428678 C1orf52Q8N6N3 182 aaKnown RBP16.48■□□□□ 0.23
UPK3BP1-201ENST00000428678 OR5M1Q8NGP8 315 aa16.48■□□□□ 0.23
UPK3BP1-201ENST00000428678 OR9A2Q8NGT5 310 aa16.48■□□□□ 0.23
UPK3BP1-201ENST00000428678 FBXO25Q8TCJ0 367 aa16.48■□□□□ 0.23
UPK3BP1-201ENST00000428678 RNF138Q8WVD3 245 aa16.48■□□□□ 0.23
UPK3BP1-201ENST00000428678 VSTM2LQ96N03 204 aa16.48■□□□□ 0.23
UPK3BP1-201ENST00000428678 FOLH1BQ9HBA9 442 aa16.48■□□□□ 0.23
UPK3BP1-201ENST00000428678 RNF14Q9UBS8 474 aa16.48■□□□□ 0.23
UPK3BP1-201ENST00000428678 ZNF337Q9Y3M9 751 aa16.48■□□□□ 0.23
UPK3BP1-201ENST00000428678 ZNF175Q9Y473 711 aa16.48■□□□□ 0.23
UPK3BP1-201ENST00000428678 OR10H1Q9Y4A9 318 aa16.48■□□□□ 0.23
UPK3BP1-201ENST00000428678 PCNX3Q9H6A9 2034 aa16.48■□□□□ 0.23
UPK3BP1-201ENST00000428678 H3BML4 177 aa16.47■□□□□ 0.23
UPK3BP1-201ENST00000428678 STX16-NPEPL1H3BU86 382 aa16.47■□□□□ 0.23
UPK3BP1-201ENST00000428678 STX16O14662 325 aa16.47■□□□□ 0.23
UPK3BP1-201ENST00000428678 SMIM24O75264 130 aa16.47■□□□□ 0.23
UPK3BP1-201ENST00000428678 ALDOAP04075 364 aaKnown RBP16.47■□□□□ 0.23
UPK3BP1-201ENST00000428678 EVI2BP34910 448 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms