RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 FUT5Q11128 374 aa7.32□□□□□ -1.24
HMGA1P4-201ENST00000428643 CHAF1BQ13112 559 aa7.32□□□□□ -1.24
HMGA1P4-201ENST00000428643 AIMP2Q13155 320 aaKnown RBP7.32□□□□□ -1.24
HMGA1P4-201ENST00000428643 SCARB2Q14108 478 aa7.32□□□□□ -1.24
HMGA1P4-201ENST00000428643 ADRM1Q16186 407 aa7.32□□□□□ -1.24
HMGA1P4-201ENST00000428643 VMACQ2NL98 169 aa7.32□□□□□ -1.24
HMGA1P4-201ENST00000428643 DEFB109BQ30KR1 87 aa7.32□□□□□ -1.24
HMGA1P4-201ENST00000428643 CYP27C1Q4G0S4 372 aa7.32□□□□□ -1.24
HMGA1P4-201ENST00000428643 LRRC23Q53EV4 343 aaPredicted RBP7.32□□□□□ -1.24
HMGA1P4-201ENST00000428643 CT45A2Q5DJT8 189 aa7.32□□□□□ -1.24
HMGA1P4-201ENST00000428643 INTS11Q5TA45 600 aaKnown RBP7.32□□□□□ -1.24
HMGA1P4-201ENST00000428643 C1orf146Q5VVC0 180 aa7.32□□□□□ -1.24
HMGA1P4-201ENST00000428643 FCRLBQ6BAA4 426 aa7.32□□□□□ -1.24
HMGA1P4-201ENST00000428643 TCTN3Q6NUS6 607 aa7.32□□□□□ -1.24
HMGA1P4-201ENST00000428643 FIGNL1Q6PIW4 674 aa7.32□□□□□ -1.24
HMGA1P4-201ENST00000428643 CCDC81Q6ZN84 652 aa7.32□□□□□ -1.24
HMGA1P4-201ENST00000428643 LRRC69Q6ZNQ3 347 aa7.32□□□□□ -1.24
HMGA1P4-201ENST00000428643 C16orf47Q6ZP98 133 aaPredicted RBP7.32□□□□□ -1.24
HMGA1P4-201ENST00000428643 KRT73Q86Y46 540 aa7.32□□□□□ -1.24
HMGA1P4-201ENST00000428643 PTOV1Q86YD1 416 aa7.32□□□□□ -1.24
HMGA1P4-201ENST00000428643 PRR22Q8IZ63 422 aa7.32□□□□□ -1.24
HMGA1P4-201ENST00000428643 TAGAPQ8N103 731 aa7.32□□□□□ -1.24
HMGA1P4-201ENST00000428643 SLC34A3Q8N130 599 aa7.32□□□□□ -1.24
HMGA1P4-201ENST00000428643 SIRT6Q8N6T7 355 aa7.32□□□□□ -1.24
HMGA1P4-201ENST00000428643 ANKFN1Q8N957 763 aa7.32□□□□□ -1.24
HMGA1P4-201ENST00000428643 HIPK4Q8NE63 616 aa7.32□□□□□ -1.24
HMGA1P4-201ENST00000428643 C17orf47Q8NEP4 570 aa7.32□□□□□ -1.24
HMGA1P4-201ENST00000428643 OR4N2Q8NGD1 307 aa7.32□□□□□ -1.24
HMGA1P4-201ENST00000428643 SLC22A8Q8TCC7 542 aa7.32□□□□□ -1.24
HMGA1P4-201ENST00000428643 BRIX1Q8TDN6 353 aaKnown RBP7.32□□□□□ -1.24
HMGA1P4-201ENST00000428643 ELP5Q8TE02 316 aa7.32□□□□□ -1.24
HMGA1P4-201ENST00000428643 SLC38A5Q8WUX1 472 aa7.32□□□□□ -1.24
HMGA1P4-201ENST00000428643 ZCCHC14Q8WYQ9 949 aaKnown RBP7.32□□□□□ -1.24
HMGA1P4-201ENST00000428643 FIG4Q92562 907 aa7.32□□□□□ -1.24
HMGA1P4-201ENST00000428643 TMBIM1Q969X1 311 aa7.32□□□□□ -1.24
HMGA1P4-201ENST00000428643 FAM162AQ96A26 154 aa7.32□□□□□ -1.24
HMGA1P4-201ENST00000428643 ADIPOR1Q96A54 375 aa7.32□□□□□ -1.24
HMGA1P4-201ENST00000428643 OMA1Q96E52 524 aa7.32□□□□□ -1.24
HMGA1P4-201ENST00000428643 SLC35A4Q96G79 324 aa7.32□□□□□ -1.24
HMGA1P4-201ENST00000428643 TMEM19Q96HH6 336 aa7.32□□□□□ -1.24
HMGA1P4-201ENST00000428643 THOC3Q96J01 351 aaKnown RBP7.32□□□□□ -1.24
HMGA1P4-201ENST00000428643 TRNT1Q96Q11 434 aaKnown RBP7.32□□□□□ -1.24
HMGA1P4-201ENST00000428643 LMF1Q96S06 567 aa7.32□□□□□ -1.24
HMGA1P4-201ENST00000428643 TRIM15Q9C019 465 aa7.32□□□□□ -1.24
HMGA1P4-201ENST00000428643 TMEM38AQ9H6F2 299 aa7.32□□□□□ -1.24
HMGA1P4-201ENST00000428643 LIN28AQ9H9Z2 209 aaKnown RBP7.32□□□□□ -1.24
HMGA1P4-201ENST00000428643 ATP13A2Q9NQ11 1180 aa7.32□□□□□ -1.24
HMGA1P4-201ENST00000428643 GIN1Q9NXP7 522 aa7.32□□□□□ -1.24
HMGA1P4-201ENST00000428643 MYOTQ9UBF9 498 aa7.32□□□□□ -1.24
HMGA1P4-201ENST00000428643 EGFL7Q9UHF1 273 aa7.32□□□□□ -1.24
HMGA1P4-201ENST00000428643 SLC7A8Q9UHI5 535 aa7.32□□□□□ -1.24
HMGA1P4-201ENST00000428643 MAGEL2Q9UJ55 1249 aa7.32□□□□□ -1.24
HMGA1P4-201ENST00000428643 MRTO4Q9UKD2 239 aaKnown RBP7.32□□□□□ -1.24
HMGA1P4-201ENST00000428643 CBLCQ9ULV8 474 aa7.32□□□□□ -1.24
HMGA1P4-201ENST00000428643 LIPT1Q9Y234 373 aa7.32□□□□□ -1.24
HMGA1P4-201ENST00000428643 SNX13Q9Y5W8 968 aa7.32□□□□□ -1.24
HMGA1P4-201ENST00000428643 ZFHX4Q86UP3 3567 aa7.32□□□□□ -1.24
HMGA1P4-201ENST00000428643 CHD8Q9HCK8 2581 aa7.32□□□□□ -1.24
HMGA1P4-201ENST00000428643 AKAP13Q12802 2813 aa7.32□□□□□ -1.24
HMGA1P4-201ENST00000428643 KNTC1P50748 2209 aa7.31□□□□□ -1.24
HMGA1P4-201ENST00000428643 A6NL46 340 aa7.31□□□□□ -1.24
HMGA1P4-201ENST00000428643 CXCR6O00574 342 aa7.31□□□□□ -1.24
HMGA1P4-201ENST00000428643 ARPC2O15144 300 aa7.31□□□□□ -1.24
HMGA1P4-201ENST00000428643 HS6ST1O60243 411 aa7.31□□□□□ -1.24
HMGA1P4-201ENST00000428643 STX11O75558 287 aa7.31□□□□□ -1.24
HMGA1P4-201ENST00000428643 REM1O75628 298 aa7.31□□□□□ -1.24
HMGA1P4-201ENST00000428643 OR2J2O76002 312 aa7.31□□□□□ -1.24
HMGA1P4-201ENST00000428643 PDE9AO76083 593 aa7.31□□□□□ -1.24
HMGA1P4-201ENST00000428643 SOX30O94993 753 aa7.31□□□□□ -1.24
HMGA1P4-201ENST00000428643 CHRM4P08173 479 aa7.31□□□□□ -1.24
HMGA1P4-201ENST00000428643 NQO1P15559 274 aaKnown RBP7.31□□□□□ -1.24
HMGA1P4-201ENST00000428643 GGT1P19440 569 aa7.31□□□□□ -1.24
HMGA1P4-201ENST00000428643 ABCD3P28288 659 aa7.31□□□□□ -1.24
HMGA1P4-201ENST00000428643 PIGAP37287 484 aa7.31□□□□□ -1.24
HMGA1P4-201ENST00000428643 EIF2S3P41091 472 aaKnown RBP7.31□□□□□ -1.24
HMGA1P4-201ENST00000428643 MAP3K8P41279 467 aa7.31□□□□□ -1.24
HMGA1P4-201ENST00000428643 TMED10P49755 219 aaKnown RBP7.31□□□□□ -1.24
HMGA1P4-201ENST00000428643 GZMMP51124 257 aa7.31□□□□□ -1.24
HMGA1P4-201ENST00000428643 POLE2P56282 527 aa7.31□□□□□ -1.24
HMGA1P4-201ENST00000428643 TLE3Q04726 772 aa7.31□□□□□ -1.24
HMGA1P4-201ENST00000428643 RAPSNQ13702 412 aa7.31□□□□□ -1.24
HMGA1P4-201ENST00000428643 FLOT2Q14254 428 aa7.31□□□□□ -1.24
HMGA1P4-201ENST00000428643 SYPL1Q16563 259 aa7.31□□□□□ -1.24
HMGA1P4-201ENST00000428643 DECR1Q16698 335 aa7.31□□□□□ -1.24
HMGA1P4-201ENST00000428643 CRTC2Q53ET0 693 aaPredicted RBP7.31□□□□□ -1.24
HMGA1P4-201ENST00000428643 EXOSC6Q5RKV6 272 aaKnown RBP7.31□□□□□ -1.24
HMGA1P4-201ENST00000428643 HEPHL1Q6MZM0 1159 aa7.31□□□□□ -1.24
HMGA1P4-201ENST00000428643 REEP3Q6NUK4 255 aa7.31□□□□□ -1.24
HMGA1P4-201ENST00000428643 JMJD6Q6NYC1 403 aaPredicted RBP7.31□□□□□ -1.24
HMGA1P4-201ENST00000428643 PGM2L1Q6PCE3 622 aa7.31□□□□□ -1.24
HMGA1P4-201ENST00000428643 OLIG3Q7RTU3 272 aa7.31□□□□□ -1.24
HMGA1P4-201ENST00000428643 HMGN2P46Q86SG4 172 aa7.31□□□□□ -1.24
HMGA1P4-201ENST00000428643 RPS19BP1Q86WX3 136 aaKnown RBP7.31□□□□□ -1.24
HMGA1P4-201ENST00000428643 DHFR2Q86XF0 187 aa7.31□□□□□ -1.24
HMGA1P4-201ENST00000428643 SLC30A8Q8IWU4 369 aa7.31□□□□□ -1.24
HMGA1P4-201ENST00000428643 BCORP1Q8N888 145 aa7.31□□□□□ -1.24
HMGA1P4-201ENST00000428643 ZNF441Q8N8Z8 693 aa7.31□□□□□ -1.24
HMGA1P4-201ENST00000428643 TMEM102Q8N9M5 508 aaPredicted RBP7.31□□□□□ -1.24
HMGA1P4-201ENST00000428643 CHDHQ8NE62 594 aaPredicted RBP7.31□□□□□ -1.24
HMGA1P4-201ENST00000428643 OR5M3Q8NGP4 307 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms