RNA–Protein interactions for RNA: ENST00000428574.6

NR1I3-209, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-209ENST00000428574 HEXBP07686 556 aa8.43□□□□□ -1.06
NR1I3-209ENST00000428574 ENDOUP21128 410 aaKnown RBP8.43□□□□□ -1.06
NR1I3-209ENST00000428574 ATP6V1C1P21283 382 aa8.43□□□□□ -1.06
NR1I3-209ENST00000428574 AQP1P29972 269 aa8.43□□□□□ -1.06
NR1I3-209ENST00000428574 DNAJA1P31689 397 aaKnown RBP8.43□□□□□ -1.06
NR1I3-209ENST00000428574 IFNA8P32881 189 aa8.43□□□□□ -1.06
NR1I3-209ENST00000428574 SOX11P35716 441 aa8.43□□□□□ -1.06
NR1I3-209ENST00000428574 HMGA2P52926 109 aa8.43□□□□□ -1.06
NR1I3-209ENST00000428574 VLDLRP98155 873 aa8.43□□□□□ -1.06
NR1I3-209ENST00000428574 ZNF267Q14586 743 aaPredicted RBP8.43□□□□□ -1.06
NR1I3-209ENST00000428574 TRIP6Q15654 476 aaKnown RBP8.43□□□□□ -1.06
NR1I3-209ENST00000428574 NRF1Q16656 503 aa8.43□□□□□ -1.06
NR1I3-209ENST00000428574 TMEM164Q5U3C3 297 aa8.43□□□□□ -1.06
NR1I3-209ENST00000428574 MLIPQ5VWP3 458 aa8.43□□□□□ -1.06
NR1I3-209ENST00000428574 RAB11FIP2Q7L804 512 aa8.43□□□□□ -1.06
NR1I3-209ENST00000428574 AMIGO2Q86SJ2 522 aa8.43□□□□□ -1.06
NR1I3-209ENST00000428574 EPHX4Q8IUS5 362 aa8.43□□□□□ -1.06
NR1I3-209ENST00000428574 GRAMD2AQ8IUY3 354 aa8.43□□□□□ -1.06
NR1I3-209ENST00000428574 ZNF619Q8N2I2 560 aa8.43□□□□□ -1.06
NR1I3-209ENST00000428574 METTL27Q8N6F8 245 aaPredicted RBP8.43□□□□□ -1.06
NR1I3-209ENST00000428574 SLC38A9Q8NBW4 561 aa8.43□□□□□ -1.06
NR1I3-209ENST00000428574 OR1N1Q8NGS0 311 aa8.43□□□□□ -1.06
NR1I3-209ENST00000428574 C16orf52Q8NHV5 167 aa8.43□□□□□ -1.06
NR1I3-209ENST00000428574 WDR36Q8NI36 951 aaKnown RBP8.43□□□□□ -1.06
NR1I3-209ENST00000428574 SLC2A12Q8TD20 617 aa8.43□□□□□ -1.06
NR1I3-209ENST00000428574 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.43□□□□□ -1.06
NR1I3-209ENST00000428574 CDS1Q92903 461 aa8.43□□□□□ -1.06
NR1I3-209ENST00000428574 TP53INP1Q96A56 240 aa8.43□□□□□ -1.06
NR1I3-209ENST00000428574 HSPBAP1Q96EW2 488 aa8.43□□□□□ -1.06
NR1I3-209ENST00000428574 C16orf58Q96GQ5 468 aa8.43□□□□□ -1.06
NR1I3-209ENST00000428574 TPD52L3Q96J77 140 aa8.43□□□□□ -1.06
NR1I3-209ENST00000428574 VPS50Q96JG6 964 aa8.43□□□□□ -1.06
NR1I3-209ENST00000428574 ZNF300Q96RE9 604 aaPredicted RBP8.43□□□□□ -1.06
NR1I3-209ENST00000428574 SPSB2Q99619 263 aa8.43□□□□□ -1.06
NR1I3-209ENST00000428574 PIP5K1AQ99755 562 aa8.43□□□□□ -1.06
NR1I3-209ENST00000428574 CIB1Q99828 191 aa8.43□□□□□ -1.06
NR1I3-209ENST00000428574 RBM4BQ9BQ04 359 aaKnown RBP8.43□□□□□ -1.06
NR1I3-209ENST00000428574 RBM4Q9BWF3 364 aaKnown RBP8.43□□□□□ -1.06
NR1I3-209ENST00000428574 YIPF2Q9BWQ6 316 aa8.43□□□□□ -1.06
NR1I3-209ENST00000428574 OSBPL11Q9BXB4 747 aa8.43□□□□□ -1.06
NR1I3-209ENST00000428574 ULBP3Q9BZM4 244 aa8.43□□□□□ -1.06
NR1I3-209ENST00000428574 SEMA4CQ9C0C4 833 aa8.43□□□□□ -1.06
NR1I3-209ENST00000428574 HOXD1Q9GZZ0 328 aa8.43□□□□□ -1.06
NR1I3-209ENST00000428574 RUBCNLQ9H714 662 aa8.43□□□□□ -1.06
NR1I3-209ENST00000428574 NTN4Q9HB63 628 aa8.43□□□□□ -1.06
NR1I3-209ENST00000428574 TOR4AQ9NXH8 423 aa8.43□□□□□ -1.06
NR1I3-209ENST00000428574 NDUFAF4Q9P032 175 aa8.43□□□□□ -1.06
NR1I3-209ENST00000428574 GPN3Q9UHW5 284 aaPredicted RBP8.43□□□□□ -1.06
NR1I3-209ENST00000428574 ENOPH1Q9UHY7 261 aa8.43□□□□□ -1.06
NR1I3-209ENST00000428574 ACAD8Q9UKU7 415 aa8.43□□□□□ -1.06
NR1I3-209ENST00000428574 OAZ3Q9UMX2 235 aa8.43□□□□□ -1.06
NR1I3-209ENST00000428574 ERVK-19Q9WJR5 959 aa8.43□□□□□ -1.06
NR1I3-209ENST00000428574 GPR55Q9Y2T6 319 aaPredicted RBP8.43□□□□□ -1.06
NR1I3-209ENST00000428574 FAM32AQ9Y421 112 aaKnown RBP8.43□□□□□ -1.06
NR1I3-209ENST00000428574 RP1P56715 2156 aa8.43□□□□□ -1.06
NR1I3-209ENST00000428574 ASXL3Q9C0F0 2248 aa8.42□□□□□ -1.06
NR1I3-209ENST00000428574 G3V2T6 193 aa8.42□□□□□ -1.06
NR1I3-209ENST00000428574 PLD2O14939 933 aa8.42□□□□□ -1.06
NR1I3-209ENST00000428574 TPST1O60507 370 aa8.42□□□□□ -1.06
NR1I3-209ENST00000428574 CSO75390 466 aaKnown RBP8.42□□□□□ -1.06
NR1I3-209ENST00000428574 KCNK2O95069 426 aa8.42□□□□□ -1.06
NR1I3-209ENST00000428574 OXSR1O95747 527 aaPredicted RBP8.42□□□□□ -1.06
NR1I3-209ENST00000428574 DLGAP3O95886 979 aa8.42□□□□□ -1.06
NR1I3-209ENST00000428574 CLPSP04118 112 aa8.42□□□□□ -1.06
NR1I3-209ENST00000428574 NGFRP08138 427 aa8.42□□□□□ -1.06
NR1I3-209ENST00000428574 JMJD7P0C870 316 aa8.42□□□□□ -1.06
NR1I3-209ENST00000428574 THRBP10828 461 aa8.42□□□□□ -1.06
NR1I3-209ENST00000428574 CCL4P13236 92 aa8.42□□□□□ -1.06
NR1I3-209ENST00000428574 NID1P14543 1247 aa8.42□□□□□ -1.06
NR1I3-209ENST00000428574 ZNF23P17027 643 aa8.42□□□□□ -1.06
NR1I3-209ENST00000428574 TNNI3P19429 210 aa8.42□□□□□ -1.06
NR1I3-209ENST00000428574 CD82P27701 267 aa8.42□□□□□ -1.06
NR1I3-209ENST00000428574 SLC5A2P31639 672 aa8.42□□□□□ -1.06
NR1I3-209ENST00000428574 DCTP40126 519 aa8.42□□□□□ -1.06
NR1I3-209ENST00000428574 ADH7P40394 386 aa8.42□□□□□ -1.06
NR1I3-209ENST00000428574 ALDH3A2P51648 485 aa8.42□□□□□ -1.06
NR1I3-209ENST00000428574 RPS6KA3P51812 740 aa8.42□□□□□ -1.06
NR1I3-209ENST00000428574 EMP2P54851 167 aa8.42□□□□□ -1.06
NR1I3-209ENST00000428574 ERV3-1Q14264 604 aa8.42□□□□□ -1.06
NR1I3-209ENST00000428574 EXOSC7Q15024 291 aaKnown RBP8.42□□□□□ -1.06
NR1I3-209ENST00000428574 NCF4Q15080 339 aa8.42□□□□□ -1.06
NR1I3-209ENST00000428574 ZNF141Q15928 474 aa8.42□□□□□ -1.06
NR1I3-209ENST00000428574 DECR1Q16698 335 aa8.42□□□□□ -1.06
NR1I3-209ENST00000428574 DUSP7Q16829 419 aa8.42□□□□□ -1.06
NR1I3-209ENST00000428574 VWA2Q5GFL6 755 aa8.42□□□□□ -1.06
NR1I3-209ENST00000428574 ZNF311Q5JNZ3 666 aa8.42□□□□□ -1.06
NR1I3-209ENST00000428574 MFSD4BQ5TF39 518 aa8.42□□□□□ -1.06
NR1I3-209ENST00000428574 PRAMEF17Q5VTA0 474 aa8.42□□□□□ -1.06
NR1I3-209ENST00000428574 C1orf189Q5VU69 101 aa8.42□□□□□ -1.06
NR1I3-209ENST00000428574 LPCAT4Q643R3 524 aa8.42□□□□□ -1.06
NR1I3-209ENST00000428574 TYW3Q6IPR3 259 aaKnown RBP8.42□□□□□ -1.06
NR1I3-209ENST00000428574 IGF2-ASQ6U949 168 aa8.42□□□□□ -1.06
NR1I3-209ENST00000428574 FAM198BQ6UWH4 519 aa8.42□□□□□ -1.06
NR1I3-209ENST00000428574 DGAT2L6Q6ZPD8 337 aa8.42□□□□□ -1.06
NR1I3-209ENST00000428574 SLC29A4Q7RTT9 530 aa8.42□□□□□ -1.06
NR1I3-209ENST00000428574 ANKRD37Q7Z713 158 aa8.42□□□□□ -1.06
NR1I3-209ENST00000428574 VTCN1Q7Z7D3 282 aa8.42□□□□□ -1.06
NR1I3-209ENST00000428574 ZNF605Q86T29 641 aa8.42□□□□□ -1.06
NR1I3-209ENST00000428574 TMPRSS12Q86WS5 348 aa8.42□□□□□ -1.06
NR1I3-209ENST00000428574 ZNF441Q8N8Z8 693 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms