RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 INSIG1O15503 277 aa4.84□□□□□ -1.63
RIF1-203ENST00000428287 RASGRP1O95267 797 aa4.84□□□□□ -1.63
RIF1-203ENST00000428287 PDYNP01213 254 aa4.84□□□□□ -1.63
RIF1-203ENST00000428287 PSMB1P20618 241 aaKnown RBP4.84□□□□□ -1.63
RIF1-203ENST00000428287 FEN1P39748 380 aaKnown RBP4.84□□□□□ -1.63
RIF1-203ENST00000428287 LIM2P55344 173 aa4.84□□□□□ -1.63
RIF1-203ENST00000428287 SMIM11AP58511 58 aa4.84□□□□□ -1.63
RIF1-203ENST00000428287 RPA4Q13156 261 aa4.84□□□□□ -1.63
RIF1-203ENST00000428287 ZNF805Q5CZA5 627 aa4.84□□□□□ -1.63
RIF1-203ENST00000428287 FAM198BQ6UWH4 519 aa4.84□□□□□ -1.63
RIF1-203ENST00000428287 WDR53Q7Z5U6 358 aaPredicted RBP4.84□□□□□ -1.63
RIF1-203ENST00000428287 GLCCI1Q86VQ1 547 aa4.84□□□□□ -1.63
RIF1-203ENST00000428287 JAZF1Q86VZ6 243 aa4.84□□□□□ -1.63
RIF1-203ENST00000428287 CIR1Q86X95 450 aaPredicted RBP4.84□□□□□ -1.63
RIF1-203ENST00000428287 CBARPQ8N350 705 aaPredicted RBP4.84□□□□□ -1.63
RIF1-203ENST00000428287 THEM6Q8WUY1 208 aa4.84□□□□□ -1.63
RIF1-203ENST00000428287 ELOVL6Q9H5J4 265 aa4.84□□□□□ -1.63
RIF1-203ENST00000428287 BARX1Q9HBU1 254 aaPredicted RBP4.84□□□□□ -1.63
RIF1-203ENST00000428287 MED17Q9NVC6 651 aa4.84□□□□□ -1.63
RIF1-203ENST00000428287 GINS2Q9Y248 185 aa4.84□□□□□ -1.63
RIF1-203ENST00000428287 TMEM5Q9Y2B1 443 aa4.84□□□□□ -1.63
RIF1-203ENST00000428287 SPIN1Q9Y657 262 aaPredicted RBP4.84□□□□□ -1.63
RIF1-203ENST00000428287 PTPRSQ13332 1948 aa4.84□□□□□ -1.63
RIF1-203ENST00000428287 IQCF5A8MTL0 148 aa4.84□□□□□ -1.64
RIF1-203ENST00000428287 KDM4EB2RXH2 506 aaPredicted RBP4.84□□□□□ -1.64
RIF1-203ENST00000428287 PRRG1O14668 218 aa4.84□□□□□ -1.64
RIF1-203ENST00000428287 GSTZ1O43708 216 aaPredicted RBP4.84□□□□□ -1.64
RIF1-203ENST00000428287 PRAMEF12O95522 483 aa4.84□□□□□ -1.64
RIF1-203ENST00000428287 ZNF7P17097 686 aaPredicted RBP4.84□□□□□ -1.64
RIF1-203ENST00000428287 CXCL2P19875 107 aa4.84□□□□□ -1.64
RIF1-203ENST00000428287 NFYAP23511 347 aaPredicted RBP4.84□□□□□ -1.64
RIF1-203ENST00000428287 MNDAP41218 407 aa4.84□□□□□ -1.64
RIF1-203ENST00000428287 RPIAP49247 311 aa4.84□□□□□ -1.64
RIF1-203ENST00000428287 CDH12P55289 794 aa4.84□□□□□ -1.64
RIF1-203ENST00000428287 NRG3P56975 720 aa4.84□□□□□ -1.64
RIF1-203ENST00000428287 VSX2P58304 361 aaPredicted RBP4.84□□□□□ -1.64
RIF1-203ENST00000428287 CSTF1Q05048 431 aaKnown RBP4.84□□□□□ -1.64
RIF1-203ENST00000428287 TMEM132AQ24JP5 1023 aa4.84□□□□□ -1.64
RIF1-203ENST00000428287 TMEM255AQ5JRV8 349 aa4.84□□□□□ -1.64
RIF1-203ENST00000428287 MPP7Q5T2T1 576 aa4.84□□□□□ -1.64
RIF1-203ENST00000428287 UQCC3Q6UW78 93 aa4.84□□□□□ -1.64
RIF1-203ENST00000428287 GLT6D1Q7Z4J2 308 aa4.84□□□□□ -1.64
RIF1-203ENST00000428287 ZNF467Q7Z7K2 595 aaPredicted RBP4.84□□□□□ -1.64
RIF1-203ENST00000428287 TLK2Q86UE8 772 aa4.84□□□□□ -1.64
RIF1-203ENST00000428287 PHYHIPQ92561 330 aa4.84□□□□□ -1.64
RIF1-203ENST00000428287 MRPS24Q96EL2 167 aaKnown RBP4.84□□□□□ -1.64
RIF1-203ENST00000428287 C10orf90Q96M02 699 aa4.84□□□□□ -1.64
RIF1-203ENST00000428287 TOX2Q96NM4 488 aa4.84□□□□□ -1.64
RIF1-203ENST00000428287 DPH2Q9BQC3 489 aaPredicted RBP4.84□□□□□ -1.64
RIF1-203ENST00000428287 DUSP26Q9BV47 211 aa4.84□□□□□ -1.64
RIF1-203ENST00000428287 DPAGT1Q9H3H5 408 aa4.84□□□□□ -1.64
RIF1-203ENST00000428287 FBXO44Q9H4M3 255 aa4.84□□□□□ -1.64
RIF1-203ENST00000428287 MGAT4CQ9UBM8 478 aa4.84□□□□□ -1.64
RIF1-203ENST00000428287 RAB19A4D1S5 217 aa4.84□□□□□ -1.64
RIF1-203ENST00000428287 GABARAPH6UMI1 98 aa4.84□□□□□ -1.64
RIF1-203ENST00000428287 SOCS5O75159 536 aa4.84□□□□□ -1.64
RIF1-203ENST00000428287 RGRP47804 291 aa4.84□□□□□ -1.64
RIF1-203ENST00000428287 NFATC2Q13469 925 aa4.84□□□□□ -1.64
RIF1-203ENST00000428287 ATAT1Q5SQI0 421 aa4.84□□□□□ -1.64
RIF1-203ENST00000428287 CLECL1Q8IZS7 167 aa4.84□□□□□ -1.64
RIF1-203ENST00000428287 THEM5Q8N1Q8 247 aa4.84□□□□□ -1.64
RIF1-203ENST00000428287 GLYATL2Q8WU03 294 aa4.84□□□□□ -1.64
RIF1-203ENST00000428287 GTF3C2Q8WUA4 911 aaPredicted RBP4.84□□□□□ -1.64
RIF1-203ENST00000428287 SGK3Q96BR1 496 aa4.84□□□□□ -1.64
RIF1-203ENST00000428287 TPD52L3Q96J77 140 aa4.84□□□□□ -1.64
RIF1-203ENST00000428287 ZNF334Q9HCZ1 680 aaPredicted RBP4.84□□□□□ -1.64
RIF1-203ENST00000428287 C11orf16Q9NQ32 467 aa4.84□□□□□ -1.64
RIF1-203ENST00000428287 TMLHEQ9NVH6 421 aa4.84□□□□□ -1.64
RIF1-203ENST00000428287 SPATA2Q9UM82 520 aa4.84□□□□□ -1.64
RIF1-203ENST00000428287 MAN2B1O00754 1011 aa4.83□□□□□ -1.64
RIF1-203ENST00000428287 IGHV2-70P01814 119 aa4.83□□□□□ -1.64
RIF1-203ENST00000428287 IFNW1P05000 195 aa4.83□□□□□ -1.64
RIF1-203ENST00000428287 GIFP27352 417 aa4.83□□□□□ -1.64
RIF1-203ENST00000428287 SPAM1P38567 509 aa4.83□□□□□ -1.64
RIF1-203ENST00000428287 NSG1P42857 185 aa4.83□□□□□ -1.64
RIF1-203ENST00000428287 MEOX2P50222 304 aa4.83□□□□□ -1.64
RIF1-203ENST00000428287 MOB2Q70IA6 237 aa4.83□□□□□ -1.64
RIF1-203ENST00000428287 PGAP1Q75T13 922 aa4.83□□□□□ -1.64
RIF1-203ENST00000428287 TSPAN33Q86UF1 283 aa4.83□□□□□ -1.64
RIF1-203ENST00000428287 FAM217AQ8IXS0 508 aa4.83□□□□□ -1.64
RIF1-203ENST00000428287 OR6V1Q8N148 313 aa4.83□□□□□ -1.64
RIF1-203ENST00000428287 ZNF454Q8N9F8 522 aa4.83□□□□□ -1.64
RIF1-203ENST00000428287 PIH1D2Q8WWB5 315 aa4.83□□□□□ -1.64
RIF1-203ENST00000428287 WRAP53Q9BUR4 548 aaKnown RBP4.83□□□□□ -1.64
RIF1-203ENST00000428287 CPEB1Q9BZB8 566 aaKnown RBP4.83□□□□□ -1.64
RIF1-203ENST00000428287 EVA1AQ9H8M9 152 aa4.83□□□□□ -1.64
RIF1-203ENST00000428287 WNK1Q9H4A3 2382 aa4.83□□□□□ -1.64
RIF1-203ENST00000428287 JUPP14923 745 aa4.83□□□□□ -1.64
RIF1-203ENST00000428287 KLF9Q13886 244 aaPredicted RBP4.83□□□□□ -1.64
RIF1-203ENST00000428287 UPP1Q16831 310 aa4.83□□□□□ -1.64
RIF1-203ENST00000428287 FTMTQ8N4E7 242 aa4.83□□□□□ -1.64
RIF1-203ENST00000428287 GPR26Q8NDV2 337 aa4.83□□□□□ -1.64
RIF1-203ENST00000428287 EDARADDQ8WWZ3 215 aa4.83□□□□□ -1.64
RIF1-203ENST00000428287 KAT2AQ92830 837 aa4.83□□□□□ -1.64
RIF1-203ENST00000428287 OTULINQ96BN8 352 aa4.83□□□□□ -1.64
RIF1-203ENST00000428287 BTBD1Q9H0C5 482 aa4.83□□□□□ -1.64
RIF1-203ENST00000428287 ALX4Q9H161 411 aaPredicted RBP4.83□□□□□ -1.64
RIF1-203ENST00000428287 METTL17Q9H7H0 456 aaPredicted RBP4.83□□□□□ -1.64
RIF1-203ENST00000428287 PLEKHA1Q9HB21 404 aa4.83□□□□□ -1.64
RIF1-203ENST00000428287 RASL12Q9NYN1 266 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms