RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 DDX18Q9NVP1 670 aaKnown RBP16.75■□□□□ 0.27
PSPC1-202ENST00000427943 C1orf109Q9NX04 203 aa16.75■□□□□ 0.27
PSPC1-202ENST00000427943 FBXL2Q9UKC9 423 aa16.75■□□□□ 0.27
PSPC1-202ENST00000427943 A0A087WV62 115 aa16.74■□□□□ 0.27
PSPC1-202ENST00000427943 TMEM233B4DJY2 109 aa16.74■□□□□ 0.27
PSPC1-202ENST00000427943 UPK1AO00322 258 aa16.74■□□□□ 0.27
PSPC1-202ENST00000427943 SCO2O43819 266 aa16.74■□□□□ 0.27
PSPC1-202ENST00000427943 CHRNGP07510 517 aa16.74■□□□□ 0.27
PSPC1-202ENST00000427943 LINC00032P0C843 101 aa16.74■□□□□ 0.27
PSPC1-202ENST00000427943 CYP4B1P13584 511 aa16.74■□□□□ 0.27
PSPC1-202ENST00000427943 PRPH2P23942 346 aa16.74■□□□□ 0.27
PSPC1-202ENST00000427943 PNLIPRP2P54317 469 aa16.74■□□□□ 0.27
PSPC1-202ENST00000427943 RPL38P63173 70 aaKnown RBP16.74■□□□□ 0.27
PSPC1-202ENST00000427943 IFFO1Q0D2I5 559 aa16.74■□□□□ 0.27
PSPC1-202ENST00000427943 KANK2Q63ZY3 851 aa16.74■□□□□ 0.27
PSPC1-202ENST00000427943 NSUN5P2Q63ZY6 315 aa16.74■□□□□ 0.27
PSPC1-202ENST00000427943 Q6ZSR9 355 aa16.74■□□□□ 0.27
PSPC1-202ENST00000427943 PLCZ1Q86YW0 608 aa16.74■□□□□ 0.27
PSPC1-202ENST00000427943 CLHC1Q8NHS4 586 aa16.74■□□□□ 0.27
PSPC1-202ENST00000427943 TAS2R7Q9NYW3 318 aa16.74■□□□□ 0.27
PSPC1-202ENST00000427943 C19orf53Q9UNZ5 99 aaPredicted RBP16.74■□□□□ 0.27
PSPC1-202ENST00000427943 CCDC168Q8NDH2 2452 aa16.73■□□□□ 0.27
PSPC1-202ENST00000427943 B4DXG7 233 aa16.73■□□□□ 0.27
PSPC1-202ENST00000427943 PLOD2O00469 737 aa16.73■□□□□ 0.27
PSPC1-202ENST00000427943 DVL2O14641 736 aa16.73■□□□□ 0.27
PSPC1-202ENST00000427943 PDPK1O15530 556 aa16.73■□□□□ 0.27
PSPC1-202ENST00000427943 AKAP10O43572 662 aa16.73■□□□□ 0.27
PSPC1-202ENST00000427943 SLITRK5O94991 958 aa16.73■□□□□ 0.27
PSPC1-202ENST00000427943 PSMG1O95456 288 aa16.73■□□□□ 0.27
PSPC1-202ENST00000427943 ACTL6AO96019 429 aa16.73■□□□□ 0.27
PSPC1-202ENST00000427943 IL2RAP01589 272 aa16.73■□□□□ 0.27
PSPC1-202ENST00000427943 NEFHP12036 1026 aa16.73■□□□□ 0.27
PSPC1-202ENST00000427943 SDC1P18827 310 aa16.73■□□□□ 0.27
PSPC1-202ENST00000427943 GRK2P25098 689 aa16.73■□□□□ 0.27
PSPC1-202ENST00000427943 CEACAM8P31997 349 aaPredicted RBP16.73■□□□□ 0.27
PSPC1-202ENST00000427943 GCKP35557 465 aa16.73■□□□□ 0.27
PSPC1-202ENST00000427943 TIMP3P35625 211 aa16.73■□□□□ 0.27
PSPC1-202ENST00000427943 ZNF136P52737 540 aa16.73■□□□□ 0.27
PSPC1-202ENST00000427943 SRYQ05066 204 aa16.73■□□□□ 0.27
PSPC1-202ENST00000427943 HSPB3Q12988 150 aa16.73■□□□□ 0.27
PSPC1-202ENST00000427943 GALNTL6Q49A17 601 aa16.73■□□□□ 0.27
PSPC1-202ENST00000427943 ZNF385BQ569K4 471 aa16.73■□□□□ 0.27
PSPC1-202ENST00000427943 ZCCHC23Q6ZST2 131 aa16.73■□□□□ 0.27
PSPC1-202ENST00000427943 ZNF551Q7Z340 670 aaPredicted RBP16.73■□□□□ 0.27
PSPC1-202ENST00000427943 TMEM200AQ86VY9 491 aa16.73■□□□□ 0.27
PSPC1-202ENST00000427943 IFNEQ86WN2 208 aa16.73■□□□□ 0.27
PSPC1-202ENST00000427943 OR2L13Q8N349 312 aa16.73■□□□□ 0.27
PSPC1-202ENST00000427943 AGR3Q8TD06 166 aa16.73■□□□□ 0.27
PSPC1-202ENST00000427943 RNF138Q8WVD3 245 aa16.73■□□□□ 0.27
PSPC1-202ENST00000427943 CIDECQ96AQ7 238 aaPredicted RBP16.73■□□□□ 0.27
PSPC1-202ENST00000427943 ELP4Q96EB1 424 aa16.73■□□□□ 0.27
PSPC1-202ENST00000427943 TSSK3Q96PN8 268 aa16.73■□□□□ 0.27
PSPC1-202ENST00000427943 CCT7Q99832 543 aa16.73■□□□□ 0.27
PSPC1-202ENST00000427943 TRMOQ9BU70 441 aa16.73■□□□□ 0.27
PSPC1-202ENST00000427943 EQTNQ9NQ60 294 aa16.73■□□□□ 0.27
PSPC1-202ENST00000427943 TAS2R10Q9NYW0 307 aa16.73■□□□□ 0.27
PSPC1-202ENST00000427943 FLRT3Q9NZU0 649 aa16.73■□□□□ 0.27
PSPC1-202ENST00000427943 KCNN3Q9UGI6 736 aa16.73■□□□□ 0.27
PSPC1-202ENST00000427943 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.73■□□□□ 0.27
PSPC1-202ENST00000427943 LGALS13Q9UHV8 139 aa16.73■□□□□ 0.27
PSPC1-202ENST00000427943 DKKL1Q9UK85 242 aa16.73■□□□□ 0.27
PSPC1-202ENST00000427943 WBP11Q9Y2W2 641 aaKnown RBP16.73■□□□□ 0.27
PSPC1-202ENST00000427943 L3MBTL1Q9Y468 752 aa16.73■□□□□ 0.27
PSPC1-202ENST00000427943 DNAJC15Q9Y5T4 150 aa16.73■□□□□ 0.27
PSPC1-202ENST00000427943 V9GYY5 206 aaPredicted RBP16.73■□□□□ 0.27
PSPC1-202ENST00000427943 NPIPB8E9PQR5 432 aa16.72■□□□□ 0.27
PSPC1-202ENST00000427943 CHEK2O96017 543 aa16.72■□□□□ 0.27
PSPC1-202ENST00000427943 SRD5A2P31213 254 aa16.72■□□□□ 0.27
PSPC1-202ENST00000427943 UQCRC1P31930 480 aa16.72■□□□□ 0.27
PSPC1-202ENST00000427943 RFX3P48380 749 aa16.72■□□□□ 0.27
PSPC1-202ENST00000427943 AGFG1P52594 562 aaKnown RBP16.72■□□□□ 0.27
PSPC1-202ENST00000427943 GAS1P54826 345 aa16.72■□□□□ 0.27
PSPC1-202ENST00000427943 PSPHP78330 225 aa16.72■□□□□ 0.27
PSPC1-202ENST00000427943 RCAN2Q14206 197 aa16.72■□□□□ 0.27
PSPC1-202ENST00000427943 RFTN2Q52LD8 501 aaPredicted RBP16.72■□□□□ 0.27
PSPC1-202ENST00000427943 PLXDC2Q6UX71 529 aa16.72■□□□□ 0.27
PSPC1-202ENST00000427943 CDH24Q86UP0 819 aa16.72■□□□□ 0.27
PSPC1-202ENST00000427943 TRIM42Q8IWZ5 723 aa16.72■□□□□ 0.27
PSPC1-202ENST00000427943 DDIASQ8IXT1 998 aa16.72■□□□□ 0.27
PSPC1-202ENST00000427943 TCP10LQ8TDR4 215 aa16.72■□□□□ 0.27
PSPC1-202ENST00000427943 AENQ8WTP8 325 aaKnown RBP16.72■□□□□ 0.27
PSPC1-202ENST00000427943 TWIST2Q8WVJ9 160 aa16.72■□□□□ 0.27
PSPC1-202ENST00000427943 METTL2AQ96IZ6 378 aaKnown RBP16.72■□□□□ 0.27
PSPC1-202ENST00000427943 FCRL1Q96LA6 429 aa16.72■□□□□ 0.27
PSPC1-202ENST00000427943 TUBA1CQ9BQE3 449 aa16.72■□□□□ 0.27
PSPC1-202ENST00000427943 GIMAP2Q9UG22 337 aa16.72■□□□□ 0.27
PSPC1-202ENST00000427943 CBLCQ9ULV8 474 aa16.72■□□□□ 0.27
PSPC1-202ENST00000427943 RPH3AQ9Y2J0 694 aaPredicted RBP16.72■□□□□ 0.27
PSPC1-202ENST00000427943 AKAP9Q99996 3911 aa16.72■□□□□ 0.27
PSPC1-202ENST00000427943 CELSR1Q9NYQ6 3014 aa16.72■□□□□ 0.27
PSPC1-202ENST00000427943 MBD3L4A6NDZ8 208 aaPredicted RBP16.71■□□□□ 0.27
PSPC1-202ENST00000427943 MBD3L3A6NE82 208 aaPredicted RBP16.71■□□□□ 0.27
PSPC1-202ENST00000427943 MBD3L5A6NJ08 208 aaPredicted RBP16.71■□□□□ 0.27
PSPC1-202ENST00000427943 CD8B2A6NJW9 211 aa16.71■□□□□ 0.27
PSPC1-202ENST00000427943 H0Y3Z8 333 aa16.71■□□□□ 0.27
PSPC1-202ENST00000427943 PIP5K1BO14986 540 aa16.71■□□□□ 0.27
PSPC1-202ENST00000427943 LSM1O15116 133 aaKnown RBP16.71■□□□□ 0.27
PSPC1-202ENST00000427943 NPHS1O60500 1241 aa16.71■□□□□ 0.27
PSPC1-202ENST00000427943 CAPN3P20807 821 aa16.71■□□□□ 0.27
PSPC1-202ENST00000427943 EVI2BP34910 448 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms