RNA–Protein interactions for RNA: ENST00000427299.6

LINC00458-202, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,030 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-202ENST00000427299 ADAM18Q9Y3Q7 739 aa4.71□□□□□ -1.66
LINC00458-202ENST00000427299 DNAJC15Q9Y5T4 150 aa4.71□□□□□ -1.66
LINC00458-202ENST00000427299 AP1M2Q9Y6Q5 423 aa4.71□□□□□ -1.66
LINC00458-202ENST00000427299 NOTCH3Q9UM47 2321 aa4.71□□□□□ -1.66
LINC00458-202ENST00000427299 COL4A6Q14031 1691 aa4.7□□□□□ -1.66
LINC00458-202ENST00000427299 DOCK7Q96N67 2140 aa4.7□□□□□ -1.66
LINC00458-202ENST00000427299 LOC285095A0A1B0GVY8 99 aa4.7□□□□□ -1.66
LINC00458-202ENST00000427299 ATP6AP2A0A1C7CYW4 349 aa4.7□□□□□ -1.66
LINC00458-202ENST00000427299 CCDC162PA2VCL2 907 aa4.7□□□□□ -1.66
LINC00458-202ENST00000427299 TRIM64BA6NI03 449 aa4.7□□□□□ -1.66
LINC00458-202ENST00000427299 A8MV72 311 aaPredicted RBP4.7□□□□□ -1.66
LINC00458-202ENST00000427299 FAM220BPB1ANY3 271 aa4.7□□□□□ -1.66
LINC00458-202ENST00000427299 NPIPB11E5RHQ5 1161 aa4.7□□□□□ -1.66
LINC00458-202ENST00000427299 H3BSA7 217 aa4.7□□□□□ -1.66
LINC00458-202ENST00000427299 SLC22A1O15245 554 aa4.7□□□□□ -1.66
LINC00458-202ENST00000427299 RAD51BO15315 384 aa4.7□□□□□ -1.66
LINC00458-202ENST00000427299 LDB2O43679 373 aa4.7□□□□□ -1.66
LINC00458-202ENST00000427299 KLK8O60259 260 aa4.7□□□□□ -1.66
LINC00458-202ENST00000427299 TPST1O60507 370 aa4.7□□□□□ -1.66
LINC00458-202ENST00000427299 PRAMEF11O60813 436 aa4.7□□□□□ -1.66
LINC00458-202ENST00000427299 ATP6AP2O75787 350 aa4.7□□□□□ -1.66
LINC00458-202ENST00000427299 CLPXO76031 633 aa4.7□□□□□ -1.66
LINC00458-202ENST00000427299 RECQL5O94762 991 aaPredicted RBP4.7□□□□□ -1.66
LINC00458-202ENST00000427299 B3GAT3O94766 335 aa4.7□□□□□ -1.66
LINC00458-202ENST00000427299 OTCP00480 354 aa4.7□□□□□ -1.66
LINC00458-202ENST00000427299 GOT2P00505 430 aaKnown RBP4.7□□□□□ -1.66
LINC00458-202ENST00000427299 RETP07949 1114 aa4.7□□□□□ -1.66
LINC00458-202ENST00000427299 OCM2P0CE71 109 aa4.7□□□□□ -1.66
LINC00458-202ENST00000427299 OCMP0CE72 109 aaPredicted RBP4.7□□□□□ -1.66
LINC00458-202ENST00000427299 MBL2P11226 248 aaPredicted RBP4.7□□□□□ -1.66
LINC00458-202ENST00000427299 SLC2A4P14672 509 aa4.7□□□□□ -1.66
LINC00458-202ENST00000427299 CKMT2P17540 419 aa4.7□□□□□ -1.66
LINC00458-202ENST00000427299 SRD5A1P18405 259 aa4.7□□□□□ -1.66
LINC00458-202ENST00000427299 IL1RNP18510 177 aa4.7□□□□□ -1.66
LINC00458-202ENST00000427299 KCNA5P22460 613 aa4.7□□□□□ -1.66
LINC00458-202ENST00000427299 CLCN4P51793 760 aa4.7□□□□□ -1.66
LINC00458-202ENST00000427299 HNRNPFP52597 415 aaKnown RBP4.7□□□□□ -1.66
LINC00458-202ENST00000427299 ZNF140P52738 457 aaPredicted RBP4.7□□□□□ -1.66
LINC00458-202ENST00000427299 CDKN2DP55273 166 aa4.7□□□□□ -1.66
LINC00458-202ENST00000427299 EMX2Q04743 252 aa4.7□□□□□ -1.66
LINC00458-202ENST00000427299 LIPEQ05469 1076 aa4.7□□□□□ -1.66
LINC00458-202ENST00000427299 EEF1A2Q05639 463 aaKnown RBP4.7□□□□□ -1.66
LINC00458-202ENST00000427299 GK3PQ14409 553 aa4.7□□□□□ -1.66
LINC00458-202ENST00000427299 TAF1AQ15573 450 aaPredicted RBP4.7□□□□□ -1.66
LINC00458-202ENST00000427299 MOGQ16653 247 aa4.7□□□□□ -1.66
LINC00458-202ENST00000427299 VPS26BQ4G0F5 336 aa4.7□□□□□ -1.66
LINC00458-202ENST00000427299 TTC23LQ6PF05 361 aa4.7□□□□□ -1.66
LINC00458-202ENST00000427299 MSANTD1Q6ZTZ1 278 aa4.7□□□□□ -1.66
LINC00458-202ENST00000427299 CREB3L2Q70SY1 520 aa4.7□□□□□ -1.66
LINC00458-202ENST00000427299 CHST9Q7L1S5 443 aa4.7□□□□□ -1.66
LINC00458-202ENST00000427299 LINC00346Q8IVM7 164 aa4.7□□□□□ -1.66
LINC00458-202ENST00000427299 FUNDC1Q8IVP5 155 aa4.7□□□□□ -1.66
LINC00458-202ENST00000427299 RBFAQ8N0V3 343 aa4.7□□□□□ -1.66
LINC00458-202ENST00000427299 CLIP4Q8N3C7 705 aa4.7□□□□□ -1.66
LINC00458-202ENST00000427299 RYBPQ8N488 228 aaPredicted RBP4.7□□□□□ -1.66
LINC00458-202ENST00000427299 OR52K2Q8NGK3 314 aa4.7□□□□□ -1.66
LINC00458-202ENST00000427299 OR13F1Q8NGS4 319 aa4.7□□□□□ -1.66
LINC00458-202ENST00000427299 C2orf15Q8WU43 125 aaKnown RBP4.7□□□□□ -1.66
LINC00458-202ENST00000427299 SLC13A3Q8WWT9 602 aa4.7□□□□□ -1.66
LINC00458-202ENST00000427299 STARD8Q92502 1023 aa4.7□□□□□ -1.66
LINC00458-202ENST00000427299 FCGR1BQ92637 280 aa4.7□□□□□ -1.66
LINC00458-202ENST00000427299 CASP10Q92851 521 aa4.7□□□□□ -1.66
LINC00458-202ENST00000427299 ATOH1Q92858 354 aaPredicted RBP4.7□□□□□ -1.66
LINC00458-202ENST00000427299 PTERQ96BW5 349 aa4.7□□□□□ -1.66
LINC00458-202ENST00000427299 RPRD1AQ96P16 312 aaPredicted RBP4.7□□□□□ -1.66
LINC00458-202ENST00000427299 WDFY2Q96P53 400 aa4.7□□□□□ -1.66
LINC00458-202ENST00000427299 PGLYRP2Q96PD5 576 aa4.7□□□□□ -1.66
LINC00458-202ENST00000427299 SEMA3CQ99985 751 aa4.7□□□□□ -1.66
LINC00458-202ENST00000427299 SLC39A3Q9BRY0 314 aa4.7□□□□□ -1.66
LINC00458-202ENST00000427299 DCUN1D5Q9BTE7 237 aa4.7□□□□□ -1.66
LINC00458-202ENST00000427299 H2AFJQ9BTM1 129 aa4.7□□□□□ -1.66
LINC00458-202ENST00000427299 TDRD1Q9BXT4 1180 aaKnown RBP4.7□□□□□ -1.66
LINC00458-202ENST00000427299 NACA2Q9H009 215 aa4.7□□□□□ -1.66
LINC00458-202ENST00000427299 CXCL16Q9H2A7 254 aa4.7□□□□□ -1.66
LINC00458-202ENST00000427299 KLHL31Q9H511 634 aa4.7□□□□□ -1.66
LINC00458-202ENST00000427299 RMND5AQ9H871 391 aa4.7□□□□□ -1.66
LINC00458-202ENST00000427299 ATAD3AQ9NVI7 634 aa4.7□□□□□ -1.66
LINC00458-202ENST00000427299 CMTM6Q9NX76 183 aa4.7□□□□□ -1.66
LINC00458-202ENST00000427299 MRPL15Q9P015 296 aaKnown RBP4.7□□□□□ -1.66
LINC00458-202ENST00000427299 C5AR2Q9P296 337 aa4.7□□□□□ -1.66
LINC00458-202ENST00000427299 ABI3Q9P2A4 366 aa4.7□□□□□ -1.66
LINC00458-202ENST00000427299 DNAJB9Q9UBS3 223 aa4.7□□□□□ -1.66
LINC00458-202ENST00000427299 PCTPQ9UKL6 214 aa4.7□□□□□ -1.66
LINC00458-202ENST00000427299 ERVW-1Q9UQF0 538 aa4.7□□□□□ -1.66
LINC00458-202ENST00000427299 EIF3LQ9Y262 564 aaKnown RBP4.7□□□□□ -1.66
LINC00458-202ENST00000427299 WDR37Q9Y2I8 494 aa4.7□□□□□ -1.66
LINC00458-202ENST00000427299 SNX10Q9Y5X0 201 aa4.7□□□□□ -1.66
LINC00458-202ENST00000427299 HSPE1-MOB4S4R3N1 261 aa4.7□□□□□ -1.66
LINC00458-202ENST00000427299 A0A0B4J293 547 aa4.69□□□□□ -1.66
LINC00458-202ENST00000427299 A0A0U1RQF3 1178 aa4.69□□□□□ -1.66
LINC00458-202ENST00000427299 A8MXE2 369 aa4.69□□□□□ -1.66
LINC00458-202ENST00000427299 A8MZ25 164 aa4.69□□□□□ -1.66
LINC00458-202ENST00000427299 SLC28A1O00337 649 aa4.69□□□□□ -1.66
LINC00458-202ENST00000427299 UBFD1O14562 309 aaKnown RBP4.69□□□□□ -1.66
LINC00458-202ENST00000427299 GNGT2O14610 69 aa4.69□□□□□ -1.66
LINC00458-202ENST00000427299 SLC16A5O15375 505 aa4.69□□□□□ -1.66
LINC00458-202ENST00000427299 SLC25A17O43808 307 aa4.69□□□□□ -1.66
LINC00458-202ENST00000427299 SYNCRIPO60506 623 aaKnown RBP4.69□□□□□ -1.66
LINC00458-202ENST00000427299 SOCS5O75159 536 aa4.69□□□□□ -1.66
LINC00458-202ENST00000427299 E2F6O75461 281 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms