RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 CLDN18P56856 261 aa11.09□□□□□ -0.63
HLA-DQB3-203ENST00000425319 OCRLQ01968 901 aa11.09□□□□□ -0.63
HLA-DQB3-203ENST00000425319 DECR1Q16698 335 aa11.09□□□□□ -0.63
HLA-DQB3-203ENST00000425319 LGSNQ5TDP6 509 aa11.09□□□□□ -0.63
HLA-DQB3-203ENST00000425319 BEND4Q6ZU67 534 aa11.09□□□□□ -0.63
HLA-DQB3-203ENST00000425319 COMMD6Q7Z4G1 85 aa11.09□□□□□ -0.63
HLA-DQB3-203ENST00000425319 CCDC116Q8IYX3 515 aa11.09□□□□□ -0.63
HLA-DQB3-203ENST00000425319 TM4SF18Q96CE8 201 aa11.09□□□□□ -0.63
HLA-DQB3-203ENST00000425319 CTHRC1Q96CG8 243 aa11.09□□□□□ -0.63
HLA-DQB3-203ENST00000425319 REXO5Q96IC2 774 aaKnown RBP11.09□□□□□ -0.63
HLA-DQB3-203ENST00000425319 CDK15Q96Q40 435 aa11.09□□□□□ -0.63
HLA-DQB3-203ENST00000425319 BBS4Q96RK4 519 aa11.09□□□□□ -0.63
HLA-DQB3-203ENST00000425319 PINK1Q9BXM7 581 aa11.09□□□□□ -0.63
HLA-DQB3-203ENST00000425319 TSPYL1Q9H0U9 437 aa11.09□□□□□ -0.63
HLA-DQB3-203ENST00000425319 OPN3Q9H1Y3 402 aaPredicted RBP11.09□□□□□ -0.63
HLA-DQB3-203ENST00000425319 GLRX2Q9NS18 164 aa11.09□□□□□ -0.63
HLA-DQB3-203ENST00000425319 CES1P1Q9UKY3 287 aa11.09□□□□□ -0.63
HLA-DQB3-203ENST00000425319 INAFM1C9JVW0 142 aa11.08□□□□□ -0.64
HLA-DQB3-203ENST00000425319 SEC14L5O43304 696 aa11.08□□□□□ -0.64
HLA-DQB3-203ENST00000425319 SLITRK5O94991 958 aa11.08□□□□□ -0.64
HLA-DQB3-203ENST00000425319 SYNGR4O95473 234 aa11.08□□□□□ -0.64
HLA-DQB3-203ENST00000425319 INHBAP08476 426 aa11.08□□□□□ -0.64
HLA-DQB3-203ENST00000425319 PYGBP11216 843 aa11.08□□□□□ -0.64
HLA-DQB3-203ENST00000425319 TAC1P20366 129 aa11.08□□□□□ -0.64
HLA-DQB3-203ENST00000425319 TCEA1P23193 301 aaKnown RBP11.08□□□□□ -0.64
HLA-DQB3-203ENST00000425319 PTGDSP41222 190 aa11.08□□□□□ -0.64
HLA-DQB3-203ENST00000425319 PTH2RP49190 550 aa11.08□□□□□ -0.64
HLA-DQB3-203ENST00000425319 EMDP50402 254 aa11.08□□□□□ -0.64
HLA-DQB3-203ENST00000425319 ATP5J2P56134 94 aa11.08□□□□□ -0.64
HLA-DQB3-203ENST00000425319 ETFDHQ16134 617 aa11.08□□□□□ -0.64
HLA-DQB3-203ENST00000425319 EXOC3L2Q2M3D2 409 aa11.08□□□□□ -0.64
HLA-DQB3-203ENST00000425319 GGTA1PQ4G0N0 100 aa11.08□□□□□ -0.64
HLA-DQB3-203ENST00000425319 CYP27C1Q4G0S4 372 aa11.08□□□□□ -0.64
HLA-DQB3-203ENST00000425319 PODNL1Q6PEZ8 512 aa11.08□□□□□ -0.64
HLA-DQB3-203ENST00000425319 FAM214BQ7L5A3 538 aa11.08□□□□□ -0.64
HLA-DQB3-203ENST00000425319 CXXC5Q7LFL8 322 aaKnown RBP11.08□□□□□ -0.64
HLA-DQB3-203ENST00000425319 SLC44A2Q8IWA5 706 aaPredicted RBP11.08□□□□□ -0.64
HLA-DQB3-203ENST00000425319 FAM9CQ8IZT9 166 aa11.08□□□□□ -0.64
HLA-DQB3-203ENST00000425319 MMGT1Q8N4V1 131 aa11.08□□□□□ -0.64
HLA-DQB3-203ENST00000425319 ZNF610Q8N9Z0 462 aa11.08□□□□□ -0.64
HLA-DQB3-203ENST00000425319 OR4F6Q8NGB9 312 aa11.08□□□□□ -0.64
HLA-DQB3-203ENST00000425319 UHMK1Q8TAS1 419 aaKnown RBP11.08□□□□□ -0.64
HLA-DQB3-203ENST00000425319 ZNF675Q8TD23 568 aa11.08□□□□□ -0.64
HLA-DQB3-203ENST00000425319 MTBPQ96DY7 904 aa11.08□□□□□ -0.64
HLA-DQB3-203ENST00000425319 BTBD9Q96Q07 612 aa11.08□□□□□ -0.64
HLA-DQB3-203ENST00000425319 TACO1Q9BSH4 297 aaKnown RBP11.08□□□□□ -0.64
HLA-DQB3-203ENST00000425319 HDHD5Q9BXW7 423 aa11.08□□□□□ -0.64
HLA-DQB3-203ENST00000425319 DSN1Q9H410 356 aa11.08□□□□□ -0.64
HLA-DQB3-203ENST00000425319 Q9N2J8 555 aa11.08□□□□□ -0.64
HLA-DQB3-203ENST00000425319 TRPS1Q9UHF7 1281 aa11.08□□□□□ -0.64
HLA-DQB3-203ENST00000425319 FBXL2Q9UKC9 423 aa11.08□□□□□ -0.64
HLA-DQB3-203ENST00000425319 MCTS1Q9ULC4 181 aaKnown RBP11.08□□□□□ -0.64
HLA-DQB3-203ENST00000425319 DTX4Q9Y2E6 619 aa11.08□□□□□ -0.64
HLA-DQB3-203ENST00000425319 STK38LQ9Y2H1 464 aa11.08□□□□□ -0.64
HLA-DQB3-203ENST00000425319 AP4B1Q9Y6B7 739 aa11.08□□□□□ -0.64
HLA-DQB3-203ENST00000425319 A0A1W2PS29 197 aa11.07□□□□□ -0.64
HLA-DQB3-203ENST00000425319 TTC36A6NLP5 189 aa11.07□□□□□ -0.64
HLA-DQB3-203ENST00000425319 DEFB108AA8MXU0 73 aa11.07□□□□□ -0.64
HLA-DQB3-203ENST00000425319 H3BML4 177 aa11.07□□□□□ -0.64
HLA-DQB3-203ENST00000425319 OR7A17O14581 309 aa11.07□□□□□ -0.64
HLA-DQB3-203ENST00000425319 TP73O15350 636 aa11.07□□□□□ -0.64
HLA-DQB3-203ENST00000425319 NDUFB5O43674 189 aa11.07□□□□□ -0.64
HLA-DQB3-203ENST00000425319 ZIC3O60481 467 aa11.07□□□□□ -0.64
HLA-DQB3-203ENST00000425319 ULK1O75385 1050 aa11.07□□□□□ -0.64
HLA-DQB3-203ENST00000425319 CBX7O95931 251 aa11.07□□□□□ -0.64
HLA-DQB3-203ENST00000425319 PABPC4LP0CB38 370 aaKnown RBP11.07□□□□□ -0.64
HLA-DQB3-203ENST00000425319 PCSK2P16519 638 aa11.07□□□□□ -0.64
HLA-DQB3-203ENST00000425319 HMOX2P30519 316 aa11.07□□□□□ -0.64
HLA-DQB3-203ENST00000425319 IDUAP35475 653 aa11.07□□□□□ -0.64
HLA-DQB3-203ENST00000425319 SOX18P35713 384 aa11.07□□□□□ -0.64
HLA-DQB3-203ENST00000425319 KIR2DL2P43627 348 aaPredicted RBP11.07□□□□□ -0.64
HLA-DQB3-203ENST00000425319 SERPINB9P50453 376 aa11.07□□□□□ -0.64
HLA-DQB3-203ENST00000425319 IRF9Q00978 393 aa11.07□□□□□ -0.64
HLA-DQB3-203ENST00000425319 C17orf67Q0P5P2 114 aa11.07□□□□□ -0.64
HLA-DQB3-203ENST00000425319 MGAT2Q10469 447 aa11.07□□□□□ -0.64
HLA-DQB3-203ENST00000425319 PON3Q15166 354 aa11.07□□□□□ -0.64
HLA-DQB3-203ENST00000425319 SH2D4BQ5SQS7 431 aa11.07□□□□□ -0.64
HLA-DQB3-203ENST00000425319 TEX35Q5T0J7 233 aa11.07□□□□□ -0.64
HLA-DQB3-203ENST00000425319 VWA1Q6PCB0 445 aa11.07□□□□□ -0.64
HLA-DQB3-203ENST00000425319 SH2D5Q6ZV89 423 aa11.07□□□□□ -0.64
HLA-DQB3-203ENST00000425319 EXOC3L1Q86VI1 746 aa11.07□□□□□ -0.64
HLA-DQB3-203ENST00000425319 KRTAP1-3Q8IUG1 177 aa11.07□□□□□ -0.64
HLA-DQB3-203ENST00000425319 CENPLQ8N0S6 344 aaPredicted RBP11.07□□□□□ -0.64
HLA-DQB3-203ENST00000425319 SPATA4Q8NEY3 305 aa11.07□□□□□ -0.64
HLA-DQB3-203ENST00000425319 OR52B6Q8NGF0 335 aa11.07□□□□□ -0.64
HLA-DQB3-203ENST00000425319 GTPBP3Q969Y2 492 aaKnown RBP11.07□□□□□ -0.64
HLA-DQB3-203ENST00000425319 USB1Q9BQ65 265 aaKnown RBP11.07□□□□□ -0.64
HLA-DQB3-203ENST00000425319 TBL1XR1Q9BZK7 514 aa11.07□□□□□ -0.64
HLA-DQB3-203ENST00000425319 MCM8Q9UJA3 840 aa11.07□□□□□ -0.64
HLA-DQB3-203ENST00000425319 ABCG2Q9UNQ0 655 aa11.07□□□□□ -0.64
HLA-DQB3-203ENST00000425319 ZFHX3Q15911 3703 aa11.07□□□□□ -0.64
HLA-DQB3-203ENST00000425319 TRIM64A6NGJ6 449 aa11.06□□□□□ -0.64
HLA-DQB3-203ENST00000425319 LRRC14BA6NHZ5 514 aa11.06□□□□□ -0.64
HLA-DQB3-203ENST00000425319 TRIM64BA6NI03 449 aa11.06□□□□□ -0.64
HLA-DQB3-203ENST00000425319 KIAA1324LA8MWY0 1029 aaPredicted RBP11.06□□□□□ -0.64
HLA-DQB3-203ENST00000425319 SCO2O43819 266 aa11.06□□□□□ -0.64
HLA-DQB3-203ENST00000425319 TSPAN2O60636 221 aa11.06□□□□□ -0.64
HLA-DQB3-203ENST00000425319 CRLF1O75462 422 aa11.06□□□□□ -0.64
HLA-DQB3-203ENST00000425319 PDYNP01213 254 aa11.06□□□□□ -0.64
HLA-DQB3-203ENST00000425319 ME2P23368 584 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms