RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 TROAPQ12815 778 aa3.37□□□□□ -1.87
SF3B1-205ENST00000424674 STX5Q13190 355 aa3.37□□□□□ -1.87
SF3B1-205ENST00000424674 MYBPHQ13203 477 aa3.37□□□□□ -1.87
SF3B1-205ENST00000424674 STX3Q13277 289 aa3.37□□□□□ -1.87
SF3B1-205ENST00000424674 CDH18Q13634 790 aa3.37□□□□□ -1.87
SF3B1-205ENST00000424674 GCKRQ14397 625 aa3.37□□□□□ -1.87
SF3B1-205ENST00000424674 HNF4GQ14541 408 aa3.37□□□□□ -1.87
SF3B1-205ENST00000424674 ITIH4Q14624 930 aa3.37□□□□□ -1.87
SF3B1-205ENST00000424674 SPHARQ15513 63 aa3.37□□□□□ -1.87
SF3B1-205ENST00000424674 GPR33Q49SQ1 333 aa3.37□□□□□ -1.87
SF3B1-205ENST00000424674 SFT2D3Q587I9 215 aa3.37□□□□□ -1.87
SF3B1-205ENST00000424674 CDKL4Q5MAI5 379 aa3.37□□□□□ -1.87
SF3B1-205ENST00000424674 ELFN2Q5R3F8 820 aa3.37□□□□□ -1.87
SF3B1-205ENST00000424674 CLVS2Q5SYC1 327 aa3.37□□□□□ -1.87
SF3B1-205ENST00000424674 OTUD3Q5T2D3 398 aaPredicted RBP3.37□□□□□ -1.87
SF3B1-205ENST00000424674 MFSD14CQ5VZR4 134 aa3.37□□□□□ -1.87
SF3B1-205ENST00000424674 LIPJQ5W064 366 aa3.37□□□□□ -1.87
SF3B1-205ENST00000424674 SLC8B1Q6J4K2 584 aa3.37□□□□□ -1.87
SF3B1-205ENST00000424674 FAM151BQ6UXP7 276 aa3.37□□□□□ -1.87
SF3B1-205ENST00000424674 HSDL2Q6YN16 418 aa3.37□□□□□ -1.87
SF3B1-205ENST00000424674 UTS2BQ765I0 119 aa3.37□□□□□ -1.87
SF3B1-205ENST00000424674 ARCQ7LC44 396 aa3.37□□□□□ -1.87
SF3B1-205ENST00000424674 ABHD12BQ7Z5M8 362 aaPredicted RBP3.37□□□□□ -1.87
SF3B1-205ENST00000424674 WDR53Q7Z5U6 358 aaPredicted RBP3.37□□□□□ -1.87
SF3B1-205ENST00000424674 PATL1Q86TB9 770 aaKnown RBP3.37□□□□□ -1.87
SF3B1-205ENST00000424674 AKAP14Q86UN6 197 aa3.37□□□□□ -1.87
SF3B1-205ENST00000424674 PARGQ86W56 976 aa3.37□□□□□ -1.87
SF3B1-205ENST00000424674 MUC20Q8N307 709 aaPredicted RBP3.37□□□□□ -1.87
SF3B1-205ENST00000424674 PRSS35Q8N3Z0 413 aa3.37□□□□□ -1.87
SF3B1-205ENST00000424674 CLDN19Q8N6F1 224 aa3.37□□□□□ -1.87
SF3B1-205ENST00000424674 CCDC185Q8N715 623 aa3.37□□□□□ -1.87
SF3B1-205ENST00000424674 THAP8Q8NA92 274 aa3.37□□□□□ -1.87
SF3B1-205ENST00000424674 NOA1Q8NC60 698 aaKnown RBP3.37□□□□□ -1.87
SF3B1-205ENST00000424674 CHDHQ8NE62 594 aaPredicted RBP3.37□□□□□ -1.87
SF3B1-205ENST00000424674 ZNF548Q8NEK5 533 aaPredicted RBP3.37□□□□□ -1.87
SF3B1-205ENST00000424674 OR10H4Q8NGA5 316 aa3.37□□□□□ -1.87
SF3B1-205ENST00000424674 OR4D6Q8NGJ1 314 aa3.37□□□□□ -1.87
SF3B1-205ENST00000424674 OR4D5Q8NGN0 318 aa3.37□□□□□ -1.87
SF3B1-205ENST00000424674 OR5M8Q8NGP6 311 aa3.37□□□□□ -1.87
SF3B1-205ENST00000424674 OR9G4Q8NGQ1 327 aa3.37□□□□□ -1.87
SF3B1-205ENST00000424674 WDR36Q8NI36 951 aaKnown RBP3.37□□□□□ -1.87
SF3B1-205ENST00000424674 PHOSPHO2Q8TCD6 241 aa3.37□□□□□ -1.87
SF3B1-205ENST00000424674 TCP11Q8WWU5 503 aa3.37□□□□□ -1.87
SF3B1-205ENST00000424674 FCAMRQ8WWV6 532 aa3.37□□□□□ -1.87
SF3B1-205ENST00000424674 TMEM37Q8WXS4 190 aa3.37□□□□□ -1.87
SF3B1-205ENST00000424674 SMPDL3BQ92485 455 aa3.37□□□□□ -1.87
SF3B1-205ENST00000424674 FAM3CQ92520 227 aa3.37□□□□□ -1.87
SF3B1-205ENST00000424674 RPL3LQ92901 407 aaKnown RBP3.37□□□□□ -1.87
SF3B1-205ENST00000424674 TAAR8Q969N4 342 aa3.37□□□□□ -1.87
SF3B1-205ENST00000424674 MYLPFQ96A32 169 aa3.37□□□□□ -1.87
SF3B1-205ENST00000424674 FAM131CQ96AQ9 280 aa3.37□□□□□ -1.87
SF3B1-205ENST00000424674 SLC25A36Q96CQ1 311 aa3.37□□□□□ -1.87
SF3B1-205ENST00000424674 C10orf35Q96D05 121 aa3.37□□□□□ -1.87
SF3B1-205ENST00000424674 P2RY11Q96G91 374 aa3.37□□□□□ -1.87
SF3B1-205ENST00000424674 CCDC17Q96LX7 622 aa3.37□□□□□ -1.87
SF3B1-205ENST00000424674 C3orf30Q96M34 536 aa3.37□□□□□ -1.87
SF3B1-205ENST00000424674 ZNF778Q96MU6 729 aa3.37□□□□□ -1.87
SF3B1-205ENST00000424674 DEFB118Q96PH6 123 aa3.37□□□□□ -1.87
SF3B1-205ENST00000424674 MMS19Q96T76 1030 aa3.37□□□□□ -1.87
SF3B1-205ENST00000424674 S1PR3Q99500 378 aa3.37□□□□□ -1.87
SF3B1-205ENST00000424674 NAPGQ99747 312 aaPredicted RBP3.37□□□□□ -1.87
SF3B1-205ENST00000424674 MACROD1Q9BQ69 325 aa3.37□□□□□ -1.87
SF3B1-205ENST00000424674 SLC30A2Q9BRI3 323 aa3.37□□□□□ -1.87
SF3B1-205ENST00000424674 TMEM246Q9BRR3 403 aa3.37□□□□□ -1.87
SF3B1-205ENST00000424674 POTEKPQ9BYX7 375 aa3.37□□□□□ -1.87
SF3B1-205ENST00000424674 TSGA10Q9BZW7 698 aa3.37□□□□□ -1.87
SF3B1-205ENST00000424674 KCNN2Q9H2S1 579 aa3.37□□□□□ -1.87
SF3B1-205ENST00000424674 Q9H8V8 135 aa3.37□□□□□ -1.87
SF3B1-205ENST00000424674 APOBEC3BQ9UH17 382 aaKnown RBP3.37□□□□□ -1.87
SF3B1-205ENST00000424674 PHF11Q9UIL8 331 aa3.37□□□□□ -1.87
SF3B1-205ENST00000424674 NAGKQ9UJ70 344 aa3.37□□□□□ -1.87
SF3B1-205ENST00000424674 ZNF229Q9UJW7 825 aa3.37□□□□□ -1.87
SF3B1-205ENST00000424674 MRTO4Q9UKD2 239 aaKnown RBP3.37□□□□□ -1.87
SF3B1-205ENST00000424674 WDR83OSQ9Y284 106 aa3.37□□□□□ -1.87
SF3B1-205ENST00000424674 GSTK1Q9Y2Q3 226 aa3.37□□□□□ -1.87
SF3B1-205ENST00000424674 STARD10Q9Y365 291 aa3.37□□□□□ -1.87
SF3B1-205ENST00000424674 CGNL1Q0VF96 1302 aa3.37□□□□□ -1.87
SF3B1-205ENST00000424674 SALL1Q9NSC2 1324 aa3.37□□□□□ -1.87
SF3B1-205ENST00000424674 PNPLA6Q8IY17 1366 aa3.37□□□□□ -1.87
SF3B1-205ENST00000424674 ATP10DQ9P241 1426 aa3.36□□□□□ -1.87
SF3B1-205ENST00000424674 PLB1Q6P1J6 1458 aa3.36□□□□□ -1.87
SF3B1-205ENST00000424674 A0A0G2JLW4 131 aa3.36□□□□□ -1.87
SF3B1-205ENST00000424674 HYKKA2RU49 373 aa3.36□□□□□ -1.87
SF3B1-205ENST00000424674 SMIM23A6NLE4 172 aa3.36□□□□□ -1.87
SF3B1-205ENST00000424674 LRRC30A6NM36 301 aa3.36□□□□□ -1.87
SF3B1-205ENST00000424674 GOLGA8JA6NMD2 632 aa3.36□□□□□ -1.87
SF3B1-205ENST00000424674 C17orf105B2RV13 164 aa3.36□□□□□ -1.87
SF3B1-205ENST00000424674 E7EWF7 191 aa3.36□□□□□ -1.87
SF3B1-205ENST00000424674 POC1B-GALNT4F8VUJ3 575 aa3.36□□□□□ -1.87
SF3B1-205ENST00000424674 CLIC1O00299 241 aa3.36□□□□□ -1.87
SF3B1-205ENST00000424674 GPR171O14626 319 aa3.36□□□□□ -1.87
SF3B1-205ENST00000424674 BUD23O43709 281 aaKnown RBP3.36□□□□□ -1.87
SF3B1-205ENST00000424674 CYTH3O43739 400 aa3.36□□□□□ -1.87
SF3B1-205ENST00000424674 OAZ2O95190 189 aa3.36□□□□□ -1.87
SF3B1-205ENST00000424674 NSA2O95478 260 aaKnown RBP3.36□□□□□ -1.87
SF3B1-205ENST00000424674 SERPINE2P07093 398 aa3.36□□□□□ -1.87
SF3B1-205ENST00000424674 SERPINA6P08185 405 aa3.36□□□□□ -1.87
SF3B1-205ENST00000424674 STSP08842 583 aa3.36□□□□□ -1.87
SF3B1-205ENST00000424674 CBSLP0DN79 551 aa3.36□□□□□ -1.87
SF3B1-205ENST00000424674 ATP1B2P14415 290 aaPredicted RBP3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms