RNA–Protein interactions for RNA: ENST00000422489.1

NUP50-206, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-206ENST00000422489 PLXDC2Q6UX71 529 aa8.45□□□□□ -1.06
NUP50-206ENST00000422489 CHMP1BQ7LBR1 199 aa8.45□□□□□ -1.06
NUP50-206ENST00000422489 ZNF551Q7Z340 670 aaPredicted RBP8.45□□□□□ -1.06
NUP50-206ENST00000422489 DDIASQ8IXT1 998 aa8.45□□□□□ -1.06
NUP50-206ENST00000422489 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.45□□□□□ -1.06
NUP50-206ENST00000422489 NTNG2Q96CW9 530 aa8.45□□□□□ -1.06
NUP50-206ENST00000422489 ELP4Q96EB1 424 aa8.45□□□□□ -1.06
NUP50-206ENST00000422489 SFXN2Q96NB2 322 aa8.45□□□□□ -1.06
NUP50-206ENST00000422489 AMDHD1Q96NU7 426 aa8.45□□□□□ -1.06
NUP50-206ENST00000422489 TSSK3Q96PN8 268 aa8.45□□□□□ -1.06
NUP50-206ENST00000422489 TUBA1CQ9BQE3 449 aa8.45□□□□□ -1.06
NUP50-206ENST00000422489 DSN1Q9H410 356 aa8.45□□□□□ -1.06
NUP50-206ENST00000422489 ANKZF1Q9H8Y5 726 aa8.45□□□□□ -1.06
NUP50-206ENST00000422489 L2HGDHQ9H9P8 463 aa8.45□□□□□ -1.06
NUP50-206ENST00000422489 EQTNQ9NQ60 294 aa8.45□□□□□ -1.06
NUP50-206ENST00000422489 SDHAF3Q9NRP4 125 aa8.45□□□□□ -1.06
NUP50-206ENST00000422489 DDX18Q9NVP1 670 aaKnown RBP8.45□□□□□ -1.06
NUP50-206ENST00000422489 C1orf109Q9NX04 203 aa8.45□□□□□ -1.06
NUP50-206ENST00000422489 DNAJB12Q9NXW2 375 aaKnown RBP8.45□□□□□ -1.06
NUP50-206ENST00000422489 SH3BP4Q9P0V3 963 aa8.45□□□□□ -1.06
NUP50-206ENST00000422489 PPP4R1LQ9P1A2 415 aa8.45□□□□□ -1.06
NUP50-206ENST00000422489 ZNF629Q9UEG4 869 aaPredicted RBP8.45□□□□□ -1.06
NUP50-206ENST00000422489 BAIAP2L1Q9UHR4 511 aa8.45□□□□□ -1.06
NUP50-206ENST00000422489 FBXL2Q9UKC9 423 aa8.45□□□□□ -1.06
NUP50-206ENST00000422489 MRTO4Q9UKD2 239 aaKnown RBP8.45□□□□□ -1.06
NUP50-206ENST00000422489 C19orf53Q9UNZ5 99 aaPredicted RBP8.45□□□□□ -1.06
NUP50-206ENST00000422489 TRAF6Q9Y4K3 522 aa8.45□□□□□ -1.06
NUP50-206ENST00000422489 CCL27Q9Y4X3 112 aa8.45□□□□□ -1.06
NUP50-206ENST00000422489 WIF1Q9Y5W5 379 aa8.45□□□□□ -1.06
NUP50-206ENST00000422489 CRYBG3Q68DQ2 2970 aa8.45□□□□□ -1.06
NUP50-206ENST00000422489 A0A087WV62 115 aa8.44□□□□□ -1.06
NUP50-206ENST00000422489 CD8B2A6NJW9 211 aa8.44□□□□□ -1.06
NUP50-206ENST00000422489 C17orf51A8MQB3 221 aa8.44□□□□□ -1.06
NUP50-206ENST00000422489 UPK1AO00322 258 aa8.44□□□□□ -1.06
NUP50-206ENST00000422489 PLOD2O00469 737 aa8.44□□□□□ -1.06
NUP50-206ENST00000422489 PDPK1O15530 556 aa8.44□□□□□ -1.06
NUP50-206ENST00000422489 GMFGO60234 142 aa8.44□□□□□ -1.06
NUP50-206ENST00000422489 TMIGD3P0DMS9 266 aaPredicted RBP8.44□□□□□ -1.06
NUP50-206ENST00000422489 PRPS2P11908 318 aa8.44□□□□□ -1.06
NUP50-206ENST00000422489 CPN1P15169 458 aa8.44□□□□□ -1.06
NUP50-206ENST00000422489 HK1P19367 917 aa8.44□□□□□ -1.06
NUP50-206ENST00000422489 POU3F2P20265 443 aaPredicted RBP8.44□□□□□ -1.06
NUP50-206ENST00000422489 GRK2P25098 689 aa8.44□□□□□ -1.06
NUP50-206ENST00000422489 DPP4P27487 766 aa8.44□□□□□ -1.06
NUP50-206ENST00000422489 SRD5A2P31213 254 aa8.44□□□□□ -1.06
NUP50-206ENST00000422489 OPRM1P35372 400 aa8.44□□□□□ -1.06
NUP50-206ENST00000422489 ASCL1P50553 236 aa8.44□□□□□ -1.06
NUP50-206ENST00000422489 ZNF136P52737 540 aa8.44□□□□□ -1.06
NUP50-206ENST00000422489 MANFP55145 182 aaKnown RBP8.44□□□□□ -1.06
NUP50-206ENST00000422489 VSNL1P62760 191 aa8.44□□□□□ -1.06
NUP50-206ENST00000422489 PSPHP78330 225 aa8.44□□□□□ -1.06
NUP50-206ENST00000422489 PSG6Q00889 435 aa8.44□□□□□ -1.06
NUP50-206ENST00000422489 HSPB3Q12988 150 aa8.44□□□□□ -1.06
NUP50-206ENST00000422489 PCLAFQ15004 111 aa8.44□□□□□ -1.06
NUP50-206ENST00000422489 KIAA0040Q15053 153 aa8.44□□□□□ -1.06
NUP50-206ENST00000422489 DECR1Q16698 335 aa8.44□□□□□ -1.06
NUP50-206ENST00000422489 CYP27C1Q4G0S4 372 aa8.44□□□□□ -1.06
NUP50-206ENST00000422489 RFTN2Q52LD8 501 aaPredicted RBP8.44□□□□□ -1.06
NUP50-206ENST00000422489 FBXW10Q5XX13 1052 aa8.44□□□□□ -1.06
NUP50-206ENST00000422489 AAGABQ6PD74 315 aa8.44□□□□□ -1.06
NUP50-206ENST00000422489 Q6ZSR9 355 aa8.44□□□□□ -1.06
NUP50-206ENST00000422489 IKBIPQ70UQ0 350 aa8.44□□□□□ -1.06
NUP50-206ENST00000422489 SZRD1Q7Z422 152 aa8.44□□□□□ -1.06
NUP50-206ENST00000422489 MARCH3Q86UD3 253 aa8.44□□□□□ -1.06
NUP50-206ENST00000422489 IFNEQ86WN2 208 aa8.44□□□□□ -1.06
NUP50-206ENST00000422489 BANPQ8N9N5 519 aa8.44□□□□□ -1.06
NUP50-206ENST00000422489 C9orf106Q8NAJ2 232 aa8.44□□□□□ -1.06
NUP50-206ENST00000422489 RELL2Q8NC24 303 aaPredicted RBP8.44□□□□□ -1.06
NUP50-206ENST00000422489 OR2T11Q8NH01 316 aa8.44□□□□□ -1.06
NUP50-206ENST00000422489 CLHC1Q8NHS4 586 aa8.44□□□□□ -1.06
NUP50-206ENST00000422489 ZPLD1Q8TCW7 415 aa8.44□□□□□ -1.06
NUP50-206ENST00000422489 AGR3Q8TD06 166 aa8.44□□□□□ -1.06
NUP50-206ENST00000422489 GPR151Q8TDV0 419 aa8.44□□□□□ -1.06
NUP50-206ENST00000422489 DUSP19Q8WTR2 217 aa8.44□□□□□ -1.06
NUP50-206ENST00000422489 RNASE6Q93091 150 aaKnown RBP8.44□□□□□ -1.06
NUP50-206ENST00000422489 INTS12Q96CB8 462 aaKnown RBP8.44□□□□□ -1.06
NUP50-206ENST00000422489 PPCDCQ96CD2 204 aa8.44□□□□□ -1.06
NUP50-206ENST00000422489 DTNBP1Q96EV8 351 aa8.44□□□□□ -1.06
NUP50-206ENST00000422489 APOPT1Q96IL0 206 aa8.44□□□□□ -1.06
NUP50-206ENST00000422489 FAM111AQ96PZ2 611 aa8.44□□□□□ -1.06
NUP50-206ENST00000422489 KRTAP3-3Q9BYR6 98 aa8.44□□□□□ -1.06
NUP50-206ENST00000422489 KRTAP3-2Q9BYR7 98 aa8.44□□□□□ -1.06
NUP50-206ENST00000422489 OR2B2Q9GZK3 357 aa8.44□□□□□ -1.06
NUP50-206ENST00000422489 CALHM2Q9HA72 323 aa8.44□□□□□ -1.06
NUP50-206ENST00000422489 C3orf14Q9HBI5 128 aa8.44□□□□□ -1.06
NUP50-206ENST00000422489 EML4Q9HC35 981 aaKnown RBP8.44□□□□□ -1.06
NUP50-206ENST00000422489 Q9N2J8 555 aa8.44□□□□□ -1.06
NUP50-206ENST00000422489 TAS2R7Q9NYW3 318 aa8.44□□□□□ -1.06
NUP50-206ENST00000422489 MED11Q9P086 117 aa8.44□□□□□ -1.06
NUP50-206ENST00000422489 SLC17A7Q9P2U7 560 aa8.44□□□□□ -1.06
NUP50-206ENST00000422489 CBLCQ9ULV8 474 aa8.44□□□□□ -1.06
NUP50-206ENST00000422489 L3MBTL1Q9Y468 752 aa8.44□□□□□ -1.06
NUP50-206ENST00000422489 MYO9AB2RTY4 2548 aa8.43□□□□□ -1.06
NUP50-206ENST00000422489 LRBAP50851 2863 aa8.43□□□□□ -1.06
NUP50-206ENST00000422489 GXYLT2A0PJZ3 443 aa8.43□□□□□ -1.06
NUP50-206ENST00000422489 CLCA1A8K7I4 914 aa8.43□□□□□ -1.06
NUP50-206ENST00000422489 EEF1E1-BLOC1S5C9J1V9 151 aa8.43□□□□□ -1.06
NUP50-206ENST00000422489 EEF1E1O43324 174 aaKnown RBP8.43□□□□□ -1.06
NUP50-206ENST00000422489 FADS1O60427 444 aa8.43□□□□□ -1.06
NUP50-206ENST00000422489 ZIC3O60481 467 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms